Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch8g1060 | ATGGCGGATCTCAAAGAGCGGTTGCTTCCTCCGAAACCTGCATCTGCTATAAATCTTAGGGAGGGAATTAATAATCGACCATCAGCCTCTGGAAGGCTGCCTTTTCAAGGTGTGGATGTTTTAGGGCTGAAGAAGCGAGGCCAGGGACTTAGATCTTGGATCCGGGTAGATTCCTCTGGGAATTCCCAGATCATTGAGGTCGATAAGTTCACCATGATGCGTCGTTGTGATCTACCTGCTCGTGATTTGCGCTTGCTCGATCCTTTGTTTGTTTACCCTTCAACAATTCTTGGTAGAGAGAAGGCTATTGTGGTCAATCTAGAGCAGATTCGATGTATTATAACAGCTGAAGAAGTCTTGCTGCTAAATTCTCTTGATAGTTATGTATTTCAGTATGTGGTAGAGCTACAAAGGCGATTGAAAACCACTGGGGTTGATGAAGTTTGGCAGAATGATGCAAATCATGGAACTGACTTAAATCGAAGAAGGGGAAGTAGGAATTTTGATAATGTATTTGGAAGCACCTCTCCTGATTATTTGCCCTTTGAGTTTAGGGCTTTAGAAGTTGCTTTGGAGGCAGCTTGTACATTTCTTGATTCTCAGGCTGCAGAATTAGAAATCGAGGCATATCCATTGCTAGATGAACTTACATCAAAAATCAGTACATTAAATTTGGAGCGTGTCCGTCGCTTGAAGAGCAGACTTGTTGCCCTAACTCGTAGGGTTCAGAAGGTCAGGGATGAAATAGAGCAGCTCATGGATGATGATGGAGATATGGCAGAAATGTATCTCACTGAGAAGAAAATGAGAATGGAGTCCTTTGTTTATGGTGATCAGTCCGTGTCGGGATACAGATCAATTGATGGAGCATCTATTTCTGCTCCCGTTTCTCCTGTATCTTCACCGCCTGAAACTCGGAAGCTTGAGAAGAGCCTGAGCATTGCAAGGAGCCGGCATGAGAGCATGAGAAGTTCAGAAAGTGCCACTGAAAATATAGAGGAGCTTGAGATGCTGCTTGAAGCTTATTTTGTTGTCATTGATAGCACCCTGAACAAGTTGACATCGTTGAAGGAGTACATCGATGACACAGAAGATTTCATCAACATCCAGTTGGATAATGTACGAAATCAGTTGATTCAGTTCGAGTTACTACTCACTACCGCAACATTTGTCGTTGCCATTTTTGGGGTGGTAGCAGGAATCTTTGGCATGAATTTTGAAATACCAATGTTTGGGTATCCTGAAGCATTCAAGTGGGTCCTTGTTATTACTGGAGTAAGTGGAATCATCATATTTTCTGCATTTGTTTGGTTTTTTAGATACAAAAGACTGATGCCACTTTAA | 1344 | 42.41 | MADLKERLLPPKPASAINLREGINNRPSASGRLPFQGVDVLGLKKRGQGLRSWIRVDSSGNSQIIEVDKFTMMRRCDLPARDLRLLDPLFVYPSTILGREKAIVVNLEQIRCIITAEEVLLLNSLDSYVFQYVVELQRRLKTTGVDEVWQNDANHGTDLNRRRGSRNFDNVFGSTSPDYLPFEFRALEVALEAACTFLDSQAAELEIEAYPLLDELTSKISTLNLERVRRLKSRLVALTRRVQKVRDEIEQLMDDDGDMAEMYLTEKKMRMESFVYGDQSVSGYRSIDGASISAPVSPVSSPPETRKLEKSLSIARSRHESMRSSESATENIEELEMLLEAYFVVIDSTLNKLTSLKEYIDDTEDFINIQLDNVRNQLIQFELLLTTATFVVAIFGVVAGIFGMNFEIPMFGYPEAFKWVLVITGVSGIIIFSAFVWFFRYKRLMPL | 447 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 7453566 | 7457137 | + | MC08g0932 | Mch8g1060 | 694681 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch8g1060 | 447 | PANTHER | RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL | 36 | 444 | IPR039204 | GO:0015095(PANTHER)|GO:0015693(PANTHER) | |
| Mch8g1060 | 447 | FunFam | Magnesium transporter MRS2-1 | 41 | 124 | - | - | |
| Mch8g1060 | 447 | CDD | Mrs2_Mfm1p-like | 53 | 444 | IPR039204 | - | |
| Mch8g1060 | 447 | Gene3D | Magnesium transport protein CorA, transmembrane region | 385 | 445 | - | - | |
| Mch8g1060 | 447 | SUPERFAMILY | Magnesium transport protein CorA, transmembrane region | 384 | 437 | IPR045863 | - | |
| Mch8g1060 | 447 | Gene3D | Magnesium transport protein CorA, transmembrane region | 127 | 378 | - | - | |
| Mch8g1060 | 447 | Coils | Coil | 228 | 255 | - | - | |
| Mch8g1060 | 447 | FunFam | Magnesium transporter MRS2-1 | 385 | 445 | - | - | |
| Mch8g1060 | 447 | Gene3D | - | 41 | 124 | - | - | |
| Mch8g1060 | 447 | Pfam | Magnesium transporter MRS2-like | 326 | 375 | - | - | |
| Mch8g1060 | 447 | Pfam | Magnesium transporter MRS2-like | 57 | 270 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch3g0620 | Mch-Chr3:10588767 | Mch8g1060 | Mch-Chr8:7453566 | 1.18E-12 | dispersed | |
| Mch4g0797 | Mch-Chr4:5514716 | Mch8g1060 | Mch-Chr8:7453566 | 1.44E-103 | dispersed | |
| Mch6g1995 | Mch-Chr6:22361998 | Mch8g1060 | Mch-Chr8:7453566 | 1.15E-101 | dispersed | |
| Mch8g0141 | Mch-Chr8:881381 | Mch8g1060 | Mch-Chr8:7453566 | 8.64E-139 | dispersed | |
| Mch8g1060 | Mch-Chr8:7453566 | Mch7g1013 | Mch-Chr7:14312521 | 5.10E-107 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mch8g1060 | K16075 | - | csv:101217419 | 810.446 |