Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g1067 ATGGCTGCTGGAGGGCCTAGTTCTGGGCAGCCACAATTCCTTGCAAGGGCCGGAGATGAGAGCTTTTCGCACGCGCCGTTGATCGAGAACTCGGAAACTGATCAGATTGTTGTTCCAGACAAGAAAAGCTGGAAGAACCTTTTTGCGTACATGGGACCGGGGTTTCTTGTTTCTATTGCCTATATTGATCCTGGGAATTTTGAAACTGATCTACAATCTGGAGCACAGTACAAGTATGGGTTGCTTTGGATCATATTAGTAGCTTCCTGTGCTGCCCTGATCATTCAATCCTTAGCAGCCAATCTAGGGGTTGTCACAGGAAAACATTTAGCAGAGCACTGCAAAGCTGAATACCCCAGGGTACAAAATTTCATCCTATGGGTTCTTGCTGAAATTGCAATAGTTGCATGTGATATTCCTGAAGTTATAGGAACAGCTTTTGCATTGAATATGCTCTTCAGCATTCCAGTTTGGTGTGGTGTTCTGCTGACAGGGCTTAGTACTCTACTCCTTCTTGCGCTGCAACAATATGGGATTAGAAAGCTTGAATTCTTGATTGCAATTCTTGTATTGACAATTGCAATTTGCTTCTTCCTGGAGCTGGGCTATGCAAAACCAGATGCCGGAGAAATTCTTTATGGGCTATTTGTCCCTCAATTAAAAGGAAGTGGTGCTACTGGTCTTGCAATTTCACTTCTTGGTGCTATGGTTATGCCACATAATCTCTTTCTTCACTCCGCACTGGTGCTCTCTAGGAAAATACCCCGATCTGTTAATGGTATCAAGGAAGCTTGCAGGTTTTATATGATAGAGAGTGGGTTTGCTCTTATGGTGGCCTTCCTCATTAATGTGTCGGTCATTTCTGTTAGTGGTGCAGTTTGCAATGCCCCGAATCTAAATAAGGAGGACCAAATGAGCTGCAGTGACTTGGACTTGAATAAAGCCTCATTTTTGTTGAGAAATGTATTGGGTAAATGGAGTTCAAAACTTTTTGCCATTGCTTTGTTAGCATCTGGTCAGAGCTCTACCATAACAGGAACCTATGCAGGACAGTATGTTATGCAGGGGTTTCTTGATTTGAAACTGAGGCCATGGATCAGAAACTTTTTAACCCGAAGCTTAGCAATTGTTCCAAGTTTGATTGTTGCTATCATTGGTGGGTCTTCTGGGGCTGGGAAGTTGATCATTATTGCGTCGATGATTTTGTCATTTGAACTCCCTTTCGCTCTCGTTCCCCTTCTGAAGTTTACAAGCAGCAAGACCAAGATGGGACCACATGTTAACTCTACCGTGATTACGGTACTGACATGGATTATCGGTTTCCTCATCATGGCTATAAACATATACTACCTTATGACCCGTTTCATCCACGTGCTTCTCCACAATGATCTCCAACTCGCAGCAGTCGTCTTCATAGGGATACTTGGATTCTCAGGCATGGCATTATATTTAGCTGGAATTGCTTACCTGGTTTTCAGAAAGACCAAGGAGATCACATATCTCCTAGCACTAACAACATCAGAAAGTCTACGACTGAGCAACGAGCCGAGTAAGACATCGGGATATAGTCTCCCAAGCGAAGATACAGTAAGCATGCAGTTACCTCAAAGAACTACCAATGATGTAAACTAA 1632 43.26 MAAGGPSSGQPQFLARAGDESFSHAPLIENSETDQIVVPDKKSWKNLFAYMGPGFLVSIAYIDPGNFETDLQSGAQYKYGLLWIILVASCAALIIQSLAANLGVVTGKHLAEHCKAEYPRVQNFILWVLAEIAIVACDIPEVIGTAFALNMLFSIPVWCGVLLTGLSTLLLLALQQYGIRKLEFLIAILVLTIAICFFLELGYAKPDAGEILYGLFVPQLKGSGATGLAISLLGAMVMPHNLFLHSALVLSRKIPRSVNGIKEACRFYMIESGFALMVAFLINVSVISVSGAVCNAPNLNKEDQMSCSDLDLNKASFLLRNVLGKWSSKLFAIALLASGQSSTITGTYAGQYVMQGFLDLKLRPWIRNFLTRSLAIVPSLIVAIIGGSSGAGKLIIIASMILSFELPFALVPLLKFTSSKTKMGPHVNSTVITVLTWIIGFLIMAINIYYLMTRFIHVLLHNDLQLAAVVFIGILGFSGMALYLAGIAYLVFRKTKEITYLLALTTSESLRLSNEPSKTSGYSLPSEDTVSMQLPQRTTNDVN 543
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 7546464 7552793 + MC08g0939 Mch8g1067 694688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g1067 543 PRINTS Natural resistance-associated macrophage protein signature 229 252 IPR001046 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)
Mch8g1067 543 PRINTS Natural resistance-associated macrophage protein signature 179 200 IPR001046 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)
Mch8g1067 543 PRINTS Natural resistance-associated macrophage protein signature 367 384 IPR001046 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)
Mch8g1067 543 PRINTS Natural resistance-associated macrophage protein signature 126 152 IPR001046 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)
Mch8g1067 543 PRINTS Natural resistance-associated macrophage protein signature 399 418 IPR001046 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)
Mch8g1067 543 PRINTS Natural resistance-associated macrophage protein signature 154 173 IPR001046 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)
Mch8g1067 543 PRINTS Natural resistance-associated macrophage protein signature 339 358 IPR001046 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)
Mch8g1067 543 NCBIfam metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 46 423 IPR001046 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)
Mch8g1067 543 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 31 499 IPR001046 GO:0005384(PANTHER)|GO:0015086(PANTHER)|GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)
Mch8g1067 543 Pfam Natural resistance-associated macrophage protein-like 67 429 IPR001046 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)
Mch8g1067 543 MobiDBLite consensus disorder prediction 513 543 - -
Mch8g1067 543 Hamap Divalent metal cation transporter MntH [mntH]. 32 455 IPR001046 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)
Mch8g1067 543 NCBIfam Nramp family divalent metal transporter 52 420 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g1288 Mch-Chr2:9019477 Mch8g1067 Mch-Chr8:7546464 1.32E-107 dispersed
Mch4g1793 Mch-Chr4:20846427 Mch8g1067 Mch-Chr8:7546464 2.14E-214 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g1067 K21398 - csv:101209649 954.896