Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g1069 ATGCCGGTTGACACGTCACCAGTTTCCGGCCAGATTGTGTGCGTCACCGGCGCCGGCGGCTTCATTGCCTCTTGGCTGGTGAAGCTCCTCCTTGAGAAGGGATACACTGTTAGAGGAACTGTTAGAAACCCAGACGATGAGAAGAATGCTCATTTGAAGGATCTAGAAGGAGCTCACGACAGATTGTCTTTGTTCAGTGCTGATCTTCTTGATTTTGAGAGTCTCAAATCGGCCATTATGGGCTGTGATGGCGTTTTCCACACCGCGTCTCCGGTGACCGATGACCCGGAAAAGGTGGAACAAGCCATAATTGGGACTAAGAACGTCATGACTGCAGCAGCCGAAGCAAAAGTCCGACGGGTGGTGTTCACGTCATCGATCGGCACCGTATACATGAACCCCAACCGGAGTCCCGATACGGTGGTGGACGAGTCTTGTTGGAGTGACCTTGAGTTTTGCAAGAACACCAAGAATTGGTATTGCTATGCAAAGACAATTGCAGAGCAGGCAGCATGGGCAGTGGCAGAAGAAAGAAGATTGGATTTAGTAGTGGTGAATCCAATGTTGGTGTTGGGACCTCTGCTGCAAGCTGGTGTGAACGCAAGTGTGGTTCATATAATGAAGTATTTGACTGGATCTGCAAAGACATATGTGAATGCAGTTCAAGGCTACGTTGATGTTAAGGATGTGGCAAAGGCCCACGTTTTGGTTTATGAAACTCCCTCGGCCTCTGGCAGATATATTTGTGTTGAGAGCATGCTTCATCGTGGAGAATTGGTTGATATTCTGGCCAAGTACTTTCCTGAATATCCTCTTCCCACCAAGTGCTCTGATGAGGTGAATCCCAAGAAAAAGCCTTACAAATACACTGTTGAGAAGCTCAAGTCATTGGGAATGGAGTTCACACCAATCAAACAATGCATCTATGAAACTGTGAAGAGCCTCCAAGAGAAGGGTCATCTTCCACTTCCCTCCCAACTTCAA 984 47.87 MPVDTSPVSGQIVCVTGAGGFIASWLVKLLLEKGYTVRGTVRNPDDEKNAHLKDLEGAHDRLSLFSADLLDFESLKSAIMGCDGVFHTASPVTDDPEKVEQAIIGTKNVMTAAAEAKVRRVVFTSSIGTVYMNPNRSPDTVVDESCWSDLEFCKNTKNWYCYAKTIAEQAAWAVAEERRLDLVVVNPMLVLGPLLQAGVNASVVHIMKYLTGSAKTYVNAVQGYVDVKDVAKAHVLVYETPSASGRYICVESMLHRGELVDILAKYFPEYPLPTKCSDEVNPKKKPYKYTVEKLKSLGMEFTPIKQCIYETVKSLQEKGHLPLPSQLQ 328
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 7565343 7566650 - MC08g0941 Mch8g1069 694690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g1069 328 FunFam Cinnamoyl-CoA reductase 1 4 328 - -
Mch8g1069 328 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 316 IPR036291 -
Mch8g1069 328 CDD FR_SDR_e 13 298 - -
Mch8g1069 328 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 12 314 IPR050425 GO:0016616(PANTHER)
Mch8g1069 328 Pfam NAD dependent epimerase/dehydratase family 13 244 IPR001509 -
Mch8g1069 328 Gene3D - 4 328 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g0151 Mch-Chr2:1140331 Mch8g1069 Mch-Chr8:7565343 7.36E-96 dispersed
Mch3g0069 Mch-Chr3:772385 Mch8g1069 Mch-Chr8:7565343 6.06E-93 dispersed
Mch6g0586 Mch-Chr6:3975993 Mch8g1069 Mch-Chr8:7565343 2.47E-50 dispersed
Mch8g1069 Mch-Chr8:7565343 Mch9g0463 Mch-Chr9:3434303 1.93E-188 dispersed
Mch8g1068 Mch-Chr8:7559981 Mch8g1069 Mch-Chr8:7565343 9.46E-50 tandem
Mch8g1069 Mch-Chr8:7565343 Mch8g1070 Mch-Chr8:7576715 7.03E-208 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g1069 K09753 - csv:116401668 613.609