Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g1070 ATGCCACTCGCCGCCGCCGTAGCTTCCGGCCAAACTGTCTGCGTCACCGGCGCCGGCGGCTTCATTGCCTCCTGGCTCGTGAAGCTCCTCCTCCAAAAGGGTTACACTGTCAGAGGCACTGTCAGAAACCCAGATGATCGGAAGAATGCTCATTTGAAGGAGTTGGATGGAGCCAAGGAAAGATTGACTTTGTACGGCGCTGATCTTCTTGATTTTGAGAGCCTCAAAGCTGCCATTATCGGCTGCGATGGTGTTTTCCACACCGCTTCTCCGGTGACCGATGACCCGGAAAAGGTGGAGCAGGCAATAATCGGGACGAAGAACGTCATAATGGCTGCAGCAGAGGCGAAGGTACGACGGGTGGTGTTCACGTCGTCGATCGGAACGGTACACATGAACCCTAACCGGAGCCCTGAAACGGTGGTAGATGAATCTTGTTGGAGTGACCTTGAATTTTGCAAGAACACCAACAATTGGTATTGCTATGCAAAAACAGTGGCAGAGCAGACAGCGTGGGCGATGGCGAAGGAGAAAGGGGTGGATTTGGTGGCAGTGAATCCGATGTTGGTGCTGGGGCCACTGTTGCAAGAGACAGTAAATGCAAGTGTTGTTCATATAATGAAGTACTTGACAGGTTCTGCCAAGACATATGCAAATGCAGTACAAGGTTATGTTGATGTTAAGGATGTTGCAAAGGCTCATGTTTTGGTGTATGAGACAACCTCGGCCTATGGTCGATATATTTGTGCTGAAACTATGCTTCATCGTGGAGAGCTTGTTGAAATTTTGGCTAAGTTCTTTCCTGAGTATCCCATTCCCACCAAGTGCTCCGACGAGGTGAACCCCAAGAAAAAGCCCTACAAATTCAGTGTGAAAAAGCTTAAGGAATTGGGGATGGAATTCAAACCTGTGAAGCAATGCATTTATGAAACTGTGAAGAGCCTTCAAGAGAAGGGCCATCTTCCACTTCCAACCAAGCTTCACTCTGAAGCCAATTAA 999 48.85 MPLAAAVASGQTVCVTGAGGFIASWLVKLLLQKGYTVRGTVRNPDDRKNAHLKELDGAKERLTLYGADLLDFESLKAAIIGCDGVFHTASPVTDDPEKVEQAIIGTKNVIMAAAEAKVRRVVFTSSIGTVHMNPNRSPETVVDESCWSDLEFCKNTNNWYCYAKTVAEQTAWAMAKEKGVDLVAVNPMLVLGPLLQETVNASVVHIMKYLTGSAKTYANAVQGYVDVKDVAKAHVLVYETTSAYGRYICAETMLHRGELVEILAKFFPEYPIPTKCSDEVNPKKKPYKFSVKKLKELGMEFKPVKQCIYETVKSLQEKGHLPLPTKLHSEAN 332
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 7576715 7581756 - MC08g0942 Mch8g1070 694691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g1070 332 FunFam Cinnamoyl-CoA reductase 1 4 332 - -
Mch8g1070 332 CDD FR_SDR_e 13 298 - -
Mch8g1070 332 Gene3D - 4 331 - -
Mch8g1070 332 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 9 316 IPR036291 -
Mch8g1070 332 Pfam NAD dependent epimerase/dehydratase family 13 241 IPR001509 -
Mch8g1070 332 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 12 314 IPR050425 GO:0016616(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0024 Mch-Chr11:190773 Mch8g1070 Mch-Chr8:7576715 2.75E-88 dispersed
Mch7g0766 Mch-Chr7:12285095 Mch8g1070 Mch-Chr8:7576715 5.63E-56 dispersed
Mch8g1068 Mch-Chr8:7559981 Mch8g1070 Mch-Chr8:7576715 5.68E-43 dispersed
Mch8g1070 Mch-Chr8:7576715 Mch9g0463 Mch-Chr9:3434303 1.73E-190 dispersed
Mch8g1069 Mch-Chr8:7565343 Mch8g1070 Mch-Chr8:7576715 7.03E-208 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g1070 K09753 - csv:101219069 600.512