Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch8g1083 | ATGACCGACATTAGCTTGGAAGAAATCAAGAATGAGAACATCGATCTTGAGCGCATACCAGTTCAGGAAGTGTTTGAACAACTGAAATGTTCCCGAGAAGGTTTGTCCTCGGAGGAGGGGCGCAAGAGGCTCCAACTCTTTGGCCCAAATAAGCTGGAAGAGAAAAAGGAAAGTAAATTTCTCAAGTTTCTGGGCTTTATGTGGAATCCACTTTCGTGGGTTATGGAAGCAGCAGCTATCATGGCCATAGCTCTTGCCAATGGAGGGGGGCAACCACCGGATTGGCAAGATTTTGTGGGTATTACTGCGTTGCTTTTCATCAATTCTACAATCAGCTTTATAGAGGAAAACAATGCAGGCAATGCTGCAGCTGCACTTATGGCAGGACTTGCACCAAAAACAAAGGTCCTTCGTGATGGGAGATGGTGTGAGGAAGAGGCTGCAATCTTAGTTCCGGGAGATGTTATCAGTATTAAGTTGGGTGATATTGTTCCAGCAGATGCTCGTCTGTTGGATGGCGATCCGCTCAAGATTGATCAGTCTGCTCTTACTGGTGAGTCTTTGCCAGTTACAAAAAATGCTGGTGATGAAGTGTTTTCTGGTTCCACTGTCAAGCAAGGTGAGATCGAGGCTGTTGTTATCGCGACTGGTGTTCACACCTTCTTTGGAAAGGCTGCTCACTTGGTTGATAGCACAAATCAAGTGGGGCACTTCCAAAAGGTGTTGACTGCCATCGGAAACTTCTGCATTTGTTCGATCGCTCTGGGGATGGTGATAGAGTTAGTAGTGATGTATCCGATTCAACATCGTAGATATAGAGATGGGATTAACAATCTCTTGGTGCTTCTCATTGGGGGGATTCCAATTGCCATGCCAACAGTGTTGTCGGTCACGATGGCTATTGGTTCTCATAGGTTATCCCAGCAGGGTGCTATTACAAAGAGAATGACAGCCATTGAAGAGATGGCTGGCATGGATGTACTCTGCAGTGATAAGACTGGAACTCTAACTCTCAACAAGCTTACCGTAGACAAATCCATGATTGAGGTGTTTGTTAGAGATGTGGACAAAGATACTGTGGTTTTGCTTGGAGCTAGAGCTTCCAGGGTTGAAAATCAAGATGCTATTGATGCTTGCATCGTTGGGATGCTTGGTGATCCTAAGGAGGCCAGGGATGGCATAAAAGAGGTTCATTTCTTGCCCTTTAACCCAGTAGACAAGCGTACAGCTATTACATATATTGACAATGATGGAAACTGGCATCGAGTTAGCAAAGGAGCACCAGAGCAGATTATCGAGCTTTGCGACCTCCGTGAAGATGTAAAGAAGAAGGCTCATTCTATCATTGACAAATTCGCCGATCGCGGTCTTCGTTCTCTTGCTGTTTGCAGACAGGCGGTTCCAGAGAAGACCAAAGAAAGTCCAGGAGGACCATGGCAATTTGTTGGTCTCTTGCCTCTCTTTGATCCTCCAAGGCATGACAGTGCAGAGACAATTCGAAGGGCTCTTCATCTTGGTGTCAATGTTAAGATGATCACTGGTGACCAACTGGCGATTGGGAAGGAAACTGGCCGTAGGCTTGGAATGGGCACAAACATGTACCCATCTTCCTCACTTCTTGGACAAAGCAAGGACGAGTCAATTGCTTCCTTACCTATTGATGAGCTTATTGAGAAGGCTGATGGATTTGCAGGAGTCTTCCCCGAATTTGAATTCATAATTAAATTTTCCATTACCCATCAACTTATGCTTGTGCCACTGCTGATGTTGTTAAATGCAGAGCACAAATATGAAATTGTGAAGAGGCTTCAAGATAGGAAGCATATTTGTGGTATGACAGGAGATGGTGTGAATGATGCCCCAGCTTTGAAGAAGGCAGACATAGGAATTGCAGTTGCTGATGCAACTGATGCTGCAAGAGGTGCTTCCGATATAGTCTTGACAGAGCCAGGGCTTAGCGTGATCGTGAGCGCCGTTTTAACAAGCAGAGCCATTTTCCAGAGAATGAAGAACTACACCATCTACGCCGTTTCCATTACCATCCGTATCGTCTTGGGTTTTATGCTTCTAGCTCTCATTTGGAAGTTCGACTTCTCACCTTTCATGGTTTTGATCATAGCCATTCTCAATGATGGCACCATCATGACCATCTCTAAAGACAGAGTGAAACCTTCCCCTCTTCCCGACTCGTGGAAGCTCCGGGAGATTTTTGCCACTGGCGTTGTCTTGGGCTCCTACTTAGCAGTCATGACTGTTGTTTTCTTCTGGGTTGCTAATGCTACCGATTTCTTTTCGGACAAATTTGGTGTACGATCAATCAGAGAACATGGTGGAGAGCTCACAGCAGCTGTCTATCTTCAAGTCAGCACTGTCAGTCAGGCACTCATCTTCGTCACAAGATCCCGAAGCTGGTCGTTTGTCGAACGCCCTGGTCTACTCCTCGTGTTCGCTTTCTTCGTAGCACAGCTGGTGGCCACACTCATTGCTGTGTATGCGCACTGGGAGTTTGCAGGAATGAAGGGAATTGGATGGGGATGGGCAGGAGTGATCTGGCTCTACAGCATAATCTTCTACATCCCTCTTGATATTCTCAAGTTCGCCACTCGATACGCATTGAGCGGCAAGGCTTGGGATAACATTGTCCAAAACAAGACTGCTTTCACAACAAAGAAGGATTATGGCATTGGCGAGAGGGAAGCTCAATGGGCTGCAGCTCAGCGCACTCTTCACGGCCTACAGCCTCCTGAAACATCCGAGCTCTTCCATGACAAAAACAACTACAGGGAGCTGTCTGAGATCGCTGAGCAAGCCAAGAAGCGCGCTGAGGTTGCAAGGTTGAGGGAGCTACACACTCTGAAGGGGCATGTTGAATCGGTGGTGAAACTGAAGGGATTGGACATTGAAACAATCCAACAACACTACACTGTTTGA | 2931 | 46.5 | MTDISLEEIKNENIDLERIPVQEVFEQLKCSREGLSSEEGRKRLQLFGPNKLEEKKESKFLKFLGFMWNPLSWVMEAAAIMAIALANGGGQPPDWQDFVGITALLFINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGRWCEEEAAILVPGDVISIKLGDIVPADARLLDGDPLKIDQSALTGESLPVTKNAGDEVFSGSTVKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIALGMVIELVVMYPIQHRRYRDGINNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKSMIEVFVRDVDKDTVVLLGARASRVENQDAIDACIVGMLGDPKEARDGIKEVHFLPFNPVDKRTAITYIDNDGNWHRVSKGAPEQIIELCDLREDVKKKAHSIIDKFADRGLRSLAVCRQAVPEKTKESPGGPWQFVGLLPLFDPPRHDSAETIRRALHLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASLPIDELIEKADGFAGVFPEFEFIIKFSITHQLMLVPLLMLLNAEHKYEIVKRLQDRKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLREIFATGVVLGSYLAVMTVVFFWVANATDFFSDKFGVRSIREHGGELTAAVYLQVSTVSQALIFVTRSRSWSFVERPGLLLVFAFFVAQLVATLIAVYAHWEFAGMKGIGWGWAGVIWLYSIIFYIPLDILKFATRYALSGKAWDNIVQNKTAFTTKKDYGIGEREAQWAAAQRTLHGLQPPETSELFHDKNNYRELSEIAEQAKKRAEVARLRELHTLKGHVESVVKLKGLDIETIQQHYTV | 976 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 7660825 | 7665919 | + | MC08g0955 | Mch8g1083 | 694704 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch8g1083 | 976 | CDD | P-type_ATPase_H | 34 | 866 | IPR006534 | GO:0008553(InterPro)|GO:0016020(InterPro)|GO:0120029(InterPro) | |
Mch8g1083 | 976 | PRINTS | P-type cation-transporting ATPase superfamily signature | 483 | 494 | - | - | |
Mch8g1083 | 976 | PRINTS | P-type cation-transporting ATPase superfamily signature | 613 | 632 | - | - | |
Mch8g1083 | 976 | PRINTS | P-type cation-transporting ATPase superfamily signature | 329 | 343 | - | - | |
Mch8g1083 | 976 | PRINTS | P-type cation-transporting ATPase superfamily signature | 636 | 648 | - | - | |
Mch8g1083 | 976 | PRINTS | P-type cation-transporting ATPase superfamily signature | 505 | 515 | - | - | |
Mch8g1083 | 976 | PRINTS | P-type cation-transporting ATPase superfamily signature | 179 | 193 | - | - | |
Mch8g1083 | 976 | Gene3D | - | 341 | 488 | IPR023299 | GO:0000166(InterPro) | |
Mch8g1083 | 976 | NCBIfam | HAD-IC family P-type ATPase | 101 | 349 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
Mch8g1083 | 976 | NCBIfam | HAD-IC family P-type ATPase | 592 | 698 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
Mch8g1083 | 976 | SMART | Cation_ATPase_N_a_2 | 15 | 87 | IPR004014 | - | |
Mch8g1083 | 976 | Pfam | haloacid dehalogenase-like hydrolase | 325 | 627 | - | - | |
Mch8g1083 | 976 | FunFam | Plasma membrane ATPase | 132 | 216 | - | - | |
Mch8g1083 | 976 | Gene3D | - | 593 | 650 | IPR023214 | - | |
Mch8g1083 | 976 | FunFam | Plasma membrane ATPase | 589 | 661 | - | - | |
Mch8g1083 | 976 | Gene3D | - | 925 | 976 | - | - | |
Mch8g1083 | 976 | Pfam | Cation transporter/ATPase, N-terminus | 18 | 81 | IPR004014 | - | |
Mch8g1083 | 976 | FunFam | Plasma membrane ATPase | 341 | 488 | - | - | |
Mch8g1083 | 976 | Coils | Coil | 927 | 947 | - | - | |
Mch8g1083 | 976 | Gene3D | - | 326 | 569 | IPR023214 | - | |
Mch8g1083 | 976 | PANTHER | CALCIUM-TRANSPORTING ATPASE | 17 | 899 | - | GO:0005886(PANTHER)|GO:0008553(PANTHER)|GO:0015662(PANTHER)|GO:0016021(PANTHER)|GO:0034220(PANTHER)|GO:0051453(PANTHER)|GO:1902600(PANTHER) | |
Mch8g1083 | 976 | PRINTS | H+-transporting ATPase (proton pump) signature | 445 | 463 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
Mch8g1083 | 976 | PRINTS | H+-transporting ATPase (proton pump) signature | 560 | 576 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
Mch8g1083 | 976 | PRINTS | H+-transporting ATPase (proton pump) signature | 785 | 806 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
Mch8g1083 | 976 | SUPERFAMILY | HAD-like | 322 | 667 | IPR036412 | - | |
Mch8g1083 | 976 | SUPERFAMILY | Calcium ATPase, transduction domain A | 132 | 229 | IPR008250 | - | |
Mch8g1083 | 976 | Pfam | E1-E2 ATPase | 131 | 308 | - | - | |
Mch8g1083 | 976 | Gene3D | - | 94 | 325 | - | - | |
Mch8g1083 | 976 | Gene3D | - | 132 | 216 | - | - | |
Mch8g1083 | 976 | FunFam | ATPase 4 plasma membrane-type | 588 | 840 | - | - | |
Mch8g1083 | 976 | SFLD | C1.7: P-type atpase like | 311 | 665 | - | - | |
Mch8g1083 | 976 | FunFam | ATPase 2, plasma membrane-type | 482 | 588 | - | - | |
Mch8g1083 | 976 | NCBIfam | plasma-membrane proton-efflux P-type ATPase | 34 | 575 | IPR006534 | GO:0008553(InterPro)|GO:0016020(InterPro)|GO:0120029(InterPro) | |
Mch8g1083 | 976 | SFLD | p-type atpase | 311 | 665 | IPR044492 | - | |
Mch8g1083 | 976 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 14 | 872 | IPR023298 | - | |
Mch8g1083 | 976 | Gene3D | - | 651 | 840 | - | - | |
Mch8g1083 | 976 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 331 | 337 | IPR018303 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch8g1083 | Mch-Chr8:7660825 | Mch8g2640 | Mch-Chr8:29630087 | 0 | dispersed | |
Mch6g0646 | Mch-Chr6:4407177 | Mch8g1083 | Mch-Chr8:7660825 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch8g1083 | K01535 | - | csv:101212751 | 1737.62 |