Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g1128 ATGGCTCATATTCTACTCCATGGAACCCTTCATGTCACCATTTATGAAGTGGATAAGCTGCATTCCAGTCATAATATCTTCACCAAGTTGAGGGAAAACGTAGAAGAAGCAATTGGTTTTGGCAGAGGATTAACAAAGCTCTATGCAACCATTGATCTAGAGAAGGCCAGAGTTGGAAGAACAAGAATTCTTCAGAAAGAACATTCAAACCCAAAATGGTACGAGACTTTCCATATCTACTGCGCTCACACGGCTTCCAACATCATCTTCACTGTCAAGGACGACAATCCCATCGGAGCAACCTTAATCGGCAGAGCATATTTGTCCGTCCAAGAAATCGTAAGCGGCCAAGAAGTCGACACATGGGTTCCAATCCTCGACGAAAGCAAGAACCCCATTCGCGGGGACCCCAAAATTCACGTCAAATTACAGTATTTCGATGTCACAAAGGATCGAAATTGGGGCCGTGGCATCAAAAGCCCCAAGTTTCCTGGAGTTCCCTACACTTATTTCTCTCAGAGACGAGGCTGTAAGGTAACTCTTTACCAAGATGCCCACGTTCCCGACAATTTTGTTCCCAGAATCCCTCTTGCCGGAGGCAAGTTTTACGAGCCACATAGGTGTTGGGAGGATGTTTTTGATGCAATTACTAATGCAAAACACTTGATTTACATTACTGGATGGTCTGTTTACACTGAGATTTCTTTGGTGAGAGATACAAGGAGGCCAAAGCCTGGTGGAGACGTAATGCTCGGCGAATTGCTTAAGAGAAAGGCGAGTGAAGGAGTTAGAGTTCTTTTGCTTGTTTGGGATGATAAAACTTCTGTGCCCGTTTTGAAGGAGGAGGGGCTCATGGCAACTCATGATGAAGACACTGCCAAGTACTTTGAGAACACTGATGTCCACTGTGTGCTGTGCCCTCGTAATCCTGATGATGGGGCCAACGTTATTCAGGACATAGCGGTTGGGACTATGTTCACTCATCACCAGAAGACTGTTGTGGTGGACAGTGGGTTGCCTAATGGGGATCCAAACAGAAGGAGAATTGTGAGTTTTGTTGGTGGGATTGACCTCTGCGATGGAAGGTATGATACCCCTTTTCACTCCCTTTTCAGGACGTTGGATTCTGCCCACCATGATGATTTCCATCAGCCAAACTTCACCGGTACTTCCATAAACAAGGGCGGTCCGAGAGAGCCGTGGCACGACATCCATTCCCGCCTCGAAGGACCAGTTGCGTGGGATGTTTTGTTCAACTTTGAGCAGAGATGGAGGAAGCAGGGTGGGAAGGATATGCTTGTCAAACTGAGGGATCTTGATGACATCTTCATCACCCCGTCGCCTGTGACGTTCCCGGATGACTTCGACAGCTGGAATGTTCAAGTTTTCAGGTCGATCGATGGCGGGGCGGCTTTCGGCTTCCCCGACTCGCCTGAAGAGGCAGCCAAATCAGGGCTTATAAGTGGAAAGGACAACATTATTGATCGGAGCATTCAGGATGCTTACATCCATGCCATCCGACGAGCAAAAAACTTCATATACGTTGAAAACCAGTATTTCCTTGGAAGCTCGTTTGAATGGAGGGGCTCTGATGTGAAGCCTGAGACGATCAATGCGCTGCATCTGATCCCAAAGGAACTGTCCCTTAAGATTGTGAGCAAGATTGAAGCCAGAGAGAGGTTCAGTGTGTACATTGTTGTGCCAATGTGGCCAGAAGGATTGCCTGAGGGGGGGACGGTTCAGGCGATATTAGACTGGCAAAGGAGGACGATGGAGATGATGTATAGAGATATAGTTTTGGCTCTCAGAGCTAAAGGCATTGAAGAGAATCCTAGAAACTATCTGACATTCTTTTGCGTTGGCAATCGGGAAGTTAAAAAGCCTGGCGAGTATGAGCCATCAGAAGCACCTGAAGAAAATTCTGATTACCTTAGAGCCCAGCAAGCCAGGCGCTTCATGATTTATGTTCATGCCAAGATGATGATTGTTGATGACGAATACATAATCGTTGGATCAGCCAACATCAACCAAAGATCAATGTCTGGCGCCAGGGACTCAGAGATAGCCATGGGAGCATACCAGCCATTTCATCTGTCAACTCGAGAGCCAGCGCGAGGCGAAATCCATGGCTTCCGCCTGGCATTATGGTACGAACATCTAGGACTGCTCCATGAATCCTTCCTCTACCCAGACAGCATTGAGTGTGTGAGAAGAGTGAACCAACTTGCTGATAAATATTGGGATCTGTATTCGAGCGAGAGTTTTGAGCATGATCTTCCTGGCCACTTGCTTCGCTACCCCATTGGCATCTCTGAAGATGGTGAAGTTACAGAGCTTCCAGGATTCGAGTGCTTCCCCGATACCAAGGCGCGAGTTCTTGGTGCCAAATCTAACTATCTCCCTCCAATCCTCACTACTTGA 2421 47.34 MAHILLHGTLHVTIYEVDKLHSSHNIFTKLRENVEEAIGFGRGLTKLYATIDLEKARVGRTRILQKEHSNPKWYETFHIYCAHTASNIIFTVKDDNPIGATLIGRAYLSVQEIVSGQEVDTWVPILDESKNPIRGDPKIHVKLQYFDVTKDRNWGRGIKSPKFPGVPYTYFSQRRGCKVTLYQDAHVPDNFVPRIPLAGGKFYEPHRCWEDVFDAITNAKHLIYITGWSVYTEISLVRDTRRPKPGGDVMLGELLKRKASEGVRVLLLVWDDKTSVPVLKEEGLMATHDEDTAKYFENTDVHCVLCPRNPDDGANVIQDIAVGTMFTHHQKTVVVDSGLPNGDPNRRRIVSFVGGIDLCDGRYDTPFHSLFRTLDSAHHDDFHQPNFTGTSINKGGPREPWHDIHSRLEGPVAWDVLFNFEQRWRKQGGKDMLVKLRDLDDIFITPSPVTFPDDFDSWNVQVFRSIDGGAAFGFPDSPEEAAKSGLISGKDNIIDRSIQDAYIHAIRRAKNFIYVENQYFLGSSFEWRGSDVKPETINALHLIPKELSLKIVSKIEARERFSVYIVVPMWPEGLPEGGTVQAILDWQRRTMEMMYRDIVLALRAKGIEENPRNYLTFFCVGNREVKKPGEYEPSEAPEENSDYLRAQQARRFMIYVHAKMMIVDDEYIIVGSANINQRSMSGARDSEIAMGAYQPFHLSTREPARGEIHGFRLALWYEHLGLLHESFLYPDSIECVRRVNQLADKYWDLYSSESFEHDLPGHLLRYPIGISEDGEVTELPGFECFPDTKARVLGAKSNYLPPILTT 806
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 8063013 8071531 - MC08g0991 Mch8g1128 694749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g1128 806 FunFam Phospholipase D 465 698 - -
Mch8g1128 806 Pfam Phospholipase D C terminal 725 796 IPR024632 -
Mch8g1128 806 Gene3D Endonuclease Chain A 200 439 - -
Mch8g1128 806 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 148 IPR035892 -
Mch8g1128 806 Pfam C2 domain 8 124 IPR000008 -
Mch8g1128 806 PANTHER PHOSPHOLIPASE D 5 793 IPR015679 GO:0004630(PANTHER)|GO:0005886(PANTHER)|GO:0009395(PANTHER)
Mch8g1128 806 FunFam Phospholipase D delta 199 442 - -
Mch8g1128 806 Pfam Phospholipase D Active site motif 654 679 IPR001736 GO:0003824(InterPro)
Mch8g1128 806 SUPERFAMILY Phospholipase D/nuclease 149 434 - -
Mch8g1128 806 SUPERFAMILY Phospholipase D/nuclease 486 736 - -
Mch8g1128 806 CDD C2_plant_PLD 2 146 - -
Mch8g1128 806 Gene3D C2 domain 6 154 IPR035892 -
Mch8g1128 806 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 652 679 IPR001736 GO:0003824(InterPro)
Mch8g1128 806 PIRSF PLD_plant 1 806 IPR011402 GO:0004630(InterPro)|GO:0005509(InterPro)|GO:0016020(InterPro)|GO:0046470(InterPro)
Mch8g1128 806 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 324 362 IPR001736 GO:0003824(InterPro)
Mch8g1128 806 ProSiteProfiles C2 domain profile. 1 123 IPR000008 -
Mch8g1128 806 SMART C2_3c 9 122 IPR000008 -
Mch8g1128 806 Gene3D Endonuclease Chain A 478 695 - -
Mch8g1128 806 SMART pld_4 324 362 IPR001736 GO:0003824(InterPro)
Mch8g1128 806 SMART pld_4 652 679 IPR001736 GO:0003824(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch7g0737 Mch-Chr7:11966031 Mch8g1128 Mch-Chr8:8063013 2.40E-242 dispersed
Mch8g0878 Mch-Chr8:6261288 Mch8g1128 Mch-Chr8:8063013 6.28E-236 dispersed
Mch8g1128 Mch-Chr8:8063013 Mch8g2800 Mch-Chr8:31001624 3.12E-26 dispersed
Mch8g1250 Mch-Chr8:9021699 Mch8g1128 Mch-Chr8:8063013 3.47E-201 transposed
Mch8g0457 Mch-Chr8:3252667 Mch8g1128 Mch-Chr8:8063013 0 wgd
Mch8g1128 Mch-Chr8:8063013 Mch9g0416 Mch-Chr9:3077031 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g1128 K01115 - csv:101215246 1523.06