Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g1149 ATGGGGAATCTCAGGGCTCCATTTAGGGGTATTGTGGATGATATCAGAGGAAGAGCAGCCTGTTATAAGCAAGATTGGGTTGATGGTCGACTTTCAGGAATCGGAATTTTGGCCCCGACTGCCTACATTTTTTTCGCTTCTGCACTTCCTGTCATTGCTTTCGGTGAGCAACTTAGCCGAGATACAGATGGAAGCTTGAGCACGGTAGAAACTTTGGCTTCCACAGCCATTTGTGGCATCCTTCATTCAATTCTTGGTGGGCAACCTCTCCTAGTTGTAGGGGTTGCAGAACCTACAATTATTATGTATACATATTTGTACAATTTTTGCAAGGATAGGAAAGACATAGGGAGAGACCTCTTCTTGGCTTGGGCAGGATGGGTTTGTGTCTGGACAGCCCTCTTGCTATTCCTACTTGCCATATTCAATGCGTCCCGTCTAATCAACAGATTTACAAGGATTGCAGGGGAACTTTTTGGCATGTTGATCTCTGTTTTGTTCATTCAAGAAGCTATTAAGGGAGTGGTGAGCGAATTTAAAGTTCCAAAGGCCGAGAATCCAAGTTTAGAGCAGTATCAATTTCATTGGCTTTACACGAATGGATTACTGGGAATCATATTTACTTTTGGCCTTCTCTATACTGCTTTGAAGAGCAGAAAAGCAAGATCATGGTTGTATGGCACAGGCTGGCTAAGGACTTTCATTGCAGACTATGGAGTACCTCTAATGGTTCTAGTATGGACTGCACTATCGTTTAGTGTACCAAGCAAAGTTCCCTCTGGAGTTCCTAGAAGATTCCATAGTCCTCTGGCATGGCAATCTACTTCCCTGCACCATTGGACCGTTGTAAAGGACATGGGGAAGATACCTCCTGTATACATTTTTGCTGCCTTTATTCCTGCTGTGATGATTGCGGGACTTTATTTTTTTGATCATAGCGTTGCTTCCCAGATGGCACAACAAAAGGAGTTTAATCTCAAGAACCCTTCCGCATACCACTATGACATTTTGTTACTGGGATTTATGACTTTGCTTTGTGGGTTAATCGGGCTTCCTCCTTCAAATGGGGTCTTGCCACAGTCCCCTATGCACACCAAGTGCCTTGCAACACTCAGGAGGCGTTTGATACGAAGGAAGATGGTGGAAAGTGCAAAGGAAAGCATAAAAATGAAAGCTAGCGATTCTGAAATCTACGGCCAAATGCAAGCTGTGTTCTTAGAAATGGACAGCAGCCCAGTTCAGACGACATCAGTAGTTAAAGAGCTGGAAGATTTGAAGGAGGCTGTCATGAAAGGAGAAAGTAAGCATGACAACGCAAAGGATATGTTTGATCCGGAGAAGCATATTGACGCTTATCTTCCTGTCCGAGTAAACGAGCAAAGATTGAGCAATCTGCTGCAATCACTTCTAGTGGCAGCATCAGTCTTTGCTTTACCAGCAATAAAGAAAATACCAACGTCAGTTCTCTGGGGATACTTTGCGTACATGGCCATTGACAGTCTGCCCGGAAACCAATTCTGGGAAAGGATTTTACTTCTCTTCATAATGCCGAGTCGACGGTACAAGGTCCTAGAAGGCTTTCATGCTTCCTTTTTGGAGTCTGTGCCATTCAAATACATAGCCGCATTCACTCTATTTCAATTTGTATACTTCCTCATTTGTTTTGGAGTGACATGGATCCCCATAGCTGGAGTCTTGTTTCCTTTGCCTTTCTTCCTTCTCATCAGCATAAGACATCACATCCTTCCCAAGCTACTCCAACCTCATCATTTGCAGGAGCTTGATGCAGCTGAGTACGAAGAAATAACCGGTACCCCGGTACTCTCGCTTAGCCTCTCTCTCAAGGAAAAGGATACCATTCAAATAGATAATGACGAAGATGAAGTTGAAATATGTGATGCTGAAATACTAGATGAGTTGACGACCAATAGAGGGGAGTTGAAGGTTAGAAGTATAAGCTTAAGCGACGATAGACATGGCCAGGTTTACCCTCAGCAAGGCGTTGGCAAATTTTAA 2016 43.7 MGNLRAPFRGIVDDIRGRAACYKQDWVDGRLSGIGILAPTAYIFFASALPVIAFGEQLSRDTDGSLSTVETLASTAICGILHSILGGQPLLVVGVAEPTIIMYTYLYNFCKDRKDIGRDLFLAWAGWVCVWTALLLFLLAIFNASRLINRFTRIAGELFGMLISVLFIQEAIKGVVSEFKVPKAENPSLEQYQFHWLYTNGLLGIIFTFGLLYTALKSRKARSWLYGTGWLRTFIADYGVPLMVLVWTALSFSVPSKVPSGVPRRFHSPLAWQSTSLHHWTVVKDMGKIPPVYIFAAFIPAVMIAGLYFFDHSVASQMAQQKEFNLKNPSAYHYDILLLGFMTLLCGLIGLPPSNGVLPQSPMHTKCLATLRRRLIRRKMVESAKESIKMKASDSEIYGQMQAVFLEMDSSPVQTTSVVKELEDLKEAVMKGESKHDNAKDMFDPEKHIDAYLPVRVNEQRLSNLLQSLLVAASVFALPAIKKIPTSVLWGYFAYMAIDSLPGNQFWERILLLFIMPSRRYKVLEGFHASFLESVPFKYIAAFTLFQFVYFLICFGVTWIPIAGVLFPLPFFLLISIRHHILPKLLQPHHLQELDAAEYEEITGTPVLSLSLSLKEKDTIQIDNDEDEVEICDAEILDELTTNRGELKVRSISLSDDRHGQVYPQQGVGKF 671
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 8182561 8187956 - MC08g1010 Mch8g1149 694770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g1149 671 PANTHER ANION EXCHANGE PROTEIN 5 644 IPR003020 GO:0005452(InterPro)|GO:0005886(PANTHER)|GO:0006820(InterPro)|GO:0016020(InterPro)|GO:0022857(PANTHER)|GO:0050801(PANTHER)|GO:0055085(PANTHER)
Mch8g1149 671 Coils Coil 422 442 - -
Mch8g1149 671 Gene3D Helical hairpin bin 18 60 - -
Mch8g1149 671 Pfam HCO3- transporter integral membrane domain 455 597 IPR011531 GO:0006820(InterPro)|GO:0016020(InterPro)
Mch8g1149 671 Pfam HCO3- transporter integral membrane domain 7 184 IPR011531 GO:0006820(InterPro)|GO:0016020(InterPro)
Mch8g1149 671 Pfam HCO3- transporter integral membrane domain 201 372 IPR011531 GO:0006820(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch3g1443 Mch-Chr3:16766892 Mch8g1149 Mch-Chr8:8182561 2.45E-274 transposed
Mch6g2601 Mch-Chr6:27853078 Mch8g1149 Mch-Chr8:8182561 0 transposed
Mch8g2109 Mch-Chr8:24148031 Mch8g1149 Mch-Chr8:8182561 3.31E-276 transposed
Mch8g0425 Mch-Chr8:3041196 Mch8g1149 Mch-Chr8:8182561 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g1149 K24194 - csv:101210964 1159.44