Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g1202 ACATCATCAATGGCGGAACCAAACACTTCAGAATCTGAAAGTACCAGCGGCGGAGCTCCCAAAACTTCGGAATTGAAAACGGGAAATCGGAGGGATCGAGAACAGGGGGAGAAGCACCCAATTTACAGAGGCGTGCGGAAAAGAAGTTGGGGGAAATGGGTGTCGGAGATCCGGCAGCCGCGGAAGAAGTCTCGGATTTGGCTCGGGACATTTTCGACGGCGGAGATGGCGGCGCGTGCCCACGACGTGGCGGCGCTCAGCATCAAAGGCGATTCGGCCAAGGCGATTCTCAATTTCCCCGAGCTCGCCGGGTTGCTGCCCCGCCCGGTGTCGCTAATGCCGCGGGACATTCAGGCCGCGGCGGCGAAGGCGGCGGCGATGGTCAATTTCGATGGTTCCACTACGGCGTCGTTTTCGTCGGCGGAGTCCGATGAATTGGGGGAGATTGTGGAGTTGCCC 459 59.48 TSSMAEPNTSESESTSGGAPKTSELKTGNRRDREQGEKHPIYRGVRKRSWGKWVSEIRQPRKKSRIWLGTFSTAEMAARAHDVAALSIKGDSAKAILNFPELAGLLPRPVSLMPRDIQAAAAKAAAMVNFDGSTTASFSSAESDELGEIVELP 153
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 8570775 8571233 - MC08g1051 Mch8g1202 694823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g1202 153 Pfam AP2 domain 41 90 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Mch8g1202 153 CDD AP2 40 102 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Mch8g1202 153 PRINTS Ethylene responsive element binding protein signature 42 53 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Mch8g1202 153 PRINTS Ethylene responsive element binding protein signature 64 80 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Mch8g1202 153 FunFam Ethylene-responsive transcription factor 2 40 101 - -
Mch8g1202 153 SMART rav1_2 41 106 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Mch8g1202 153 MobiDBLite consensus disorder prediction 1 43 - -
Mch8g1202 153 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 21 143 IPR051032 -
Mch8g1202 153 MobiDBLite consensus disorder prediction 25 43 - -
Mch8g1202 153 Gene3D AP2/ERF domain 41 101 IPR036955 GO:0003700(InterPro)|GO:0006355(InterPro)
Mch8g1202 153 MobiDBLite consensus disorder prediction 1 23 - -
Mch8g1202 153 SUPERFAMILY DNA-binding domain 41 100 IPR016177 GO:0003677(InterPro)
Mch8g1202 153 ProSiteProfiles AP2/ERF domain profile. 41 100 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch4g1759 Mch-Chr4:20614480 Mch8g1202 Mch-Chr8:8570775 5.92E-23 dispersed
Mch8g0335 Mch-Chr8:2362414 Mch8g1202 Mch-Chr8:8570775 2.55E-53 dispersed
Mch8g1202 Mch-Chr8:8570775 Mch7g1201 Mch-Chr7:15660266 1.79E-18 dispersed
Mch6g0844 Mch-Chr6:5837127 Mch8g1202 Mch-Chr8:8570775 2.22E-46 wgd
Mch8g1202 Mch-Chr8:8570775 Mch8g3167 Mch-Chr8:33895417 5.45E-42 wgd
Mch8g1202 Mch-Chr8:8570775 Mch9g0319 Mch-Chr9:2386528 1.08E-52 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
43854 PF00847 AP2 5.40E-14 CL0081 Mch TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g1202 K09286 - csv:101222354 215.312