Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g1214 ATGGTTTGGTCAATGAATCCTGTACGAATTTGGAGTTTGTTCTTCCTTCTGTACTTGGCTATTCTTCTTCAAGATCACTCTCTCTGTTCCTCTTATCCCACGCCCTTAACTTGTACGGATACAACTCGCTTGTGCTCCTCGTTTTTGGCCTTCAAGCCACAGCCTAATGAGACCGTCTCTGTGATCCAGAGTATGTTCGACGTATTGCCAGAAGATGTCACCGTCGAAGGCAATGGCCGGAACTATGTGTTCATCAGGAAGAACTGCTCCTGCGCCTCTGGGTTGAAGAAATACATAACAAATACAACTTTTACCATCAAATCGAATAGCGGCTATGTTTATGACTTGGTCATGGACGCGTACGACGGCCTTGCCCTGCTGCCCAATACGACCCGAATGGCCAGAAACGGCGCCGTTGTGTCCTTGAGGCTGTTCTGTGCCTGTTCGAGCGGGCTGTGGAACTATTTGATGAGCTATGTAATGAGAGATGGCGACACCATCGAGTCTTTGGCGAGTCGATTTGGGGTCAGTATGGATAGCATTGAATCGGTGAATGGAATTGAAAATCCTGACAATGTCACTGTGGGTGCTTTGTATTATATTCCCTTGAATTCGGTTCCTGGCGATCCTTATCCTGTGGAGACAGACATTTCTCCTGCCCCTGCCCCTTCATTTTCTCAAAACAATTTCTCAGATATTGCAGAGAACCCCAAGCGTCACCCTCCTTATATATGGATTGTTGGAAGTTTGGGAGTTATTCTTATTCTGATTTTACTAGGCATAGTAGTTTATGCTTGCTTCAGGTGGTTGAAATGCTTTTCTAGACCTAGGAGTAGCCACTCCAAAGATCCCAGTGGCAAGACATCCCACAAATTCCACATTCTTGGGAAGTCAAGTTTCTTTTGTGCTTCAGGAAGGTATATTTGTTGCACTTCTGCAGATTGGAAACAAGCCAATGGGGAATCTAGCGATAACCAGAGTGCAATTCCGAAAGCTATCGAAAGCAATGTATTCGATGTAGACAAACCTGTGGTTTTCTCATGTGAAGAAATCTTTTCCTCCACTGACGGTTTCTCTGATTCAAGTCTACTTGGCCATGGAACTTATGGTTCAGTGTATTATGGCCTCCTGCGTGACCAGGAAGTTGCTATAAAAAGAATGACTGCAACGAAAACTAAAGAGTTTATGGCAGAGATGAAAGTCCTCTGCAAGGTCCATCATGCGAACCTGGTAGAATTGATTGGTTATGCAGCCAGTGAGGAGGAGCTTTTTCTTATTTATGAATATGCTCAAAAAGGTCCACTCAAAAGTCATTTACATGATCCGATGAACAAGGGTCATACGTCACTATCTTGGATTATGAGACTCCAAATCGCTCTCGATGCTGCTAGAGGTCTTGAATACATTCATGAGCATACTAAAACTCATTATGTCCATAGAGATATCAAGACAAGCAACATCTTACTTGATGGTTCTTTTAGGGCAAAGATTTCTGACTTTGGGTTAGCCAAACTTGTTGGAAAAACAAATGAAGGTGAGGCTACAGTTACCAAAGTTGTTGGTACATATGGTTATCTCGCTCCCGAATACTTAAGTAACGGTCTTGCCACAACCAAAAGTGATGTTTATGCTTTCGGAGTTGTTCTTTTTGAGCTTATATCTGGAAAGGAGGCAATTATACGAATTGAGGGCACAACTATGAAAAATCCTGAAAGACGATCGCTAGCATCCATTATGTTAGCTGTTCTTCGAAACTCTCCCGATCCTATGAATATGGCAAGTCTGAAAGATCAAGTTGATCAAAGCATGATGGATTTGTATCCTCATGACTGTCTATTCAAGGTGGCCATGTTGGCTAAGCAGTGTGTAGATGAGGATCCCATCCTACGACCTGACATGAAGCAGGTCGTAATATCCTTGTCGCAGATCCTACTGTCTTCGGTCGAGTGGGAAGCGACTCTGGCTGGTAACAGCCAAGTTTTCAGTGGTCTTGTCCAAGGAAGA 2004 43.66 MVWSMNPVRIWSLFFLLYLAILLQDHSLCSSYPTPLTCTDTTRLCSSFLAFKPQPNETVSVIQSMFDVLPEDVTVEGNGRNYVFIRKNCSCASGLKKYITNTTFTIKSNSGYVYDLVMDAYDGLALLPNTTRMARNGAVVSLRLFCACSSGLWNYLMSYVMRDGDTIESLASRFGVSMDSIESVNGIENPDNVTVGALYYIPLNSVPGDPYPVETDISPAPAPSFSQNNFSDIAENPKRHPPYIWIVGSLGVILILILLGIVVYACFRWLKCFSRPRSSHSKDPSGKTSHKFHILGKSSFFCASGRYICCTSADWKQANGESSDNQSAIPKAIESNVFDVDKPVVFSCEEIFSSTDGFSDSSLLGHGTYGSVYYGLLRDQEVAIKRMTATKTKEFMAEMKVLCKVHHANLVELIGYAASEEELFLIYEYAQKGPLKSHLHDPMNKGHTSLSWIMRLQIALDAARGLEYIHEHTKTHYVHRDIKTSNILLDGSFRAKISDFGLAKLVGKTNEGEATVTKVVGTYGYLAPEYLSNGLATTKSDVYAFGVVLFELISGKEAIIRIEGTTMKNPERRSLASIMLAVLRNSPDPMNMASLKDQVDQSMMDLYPHDCLFKVAMLAKQCVDEDPILRPDMKQVVISLSQILLSSVEWEATLAGNSQVFSGLVQGR 668
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 8673383 8677581 - MC08g1056 Mch8g1214 694835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g1214 668 Gene3D Transferase(Phosphotransferase) domain 1 431 655 - -
Mch8g1214 668 FunFam PTI1-like tyrosine-protein kinase 3 430 654 - -
Mch8g1214 668 Gene3D Phosphorylase Kinase; domain 1 330 429 - -
Mch8g1214 668 ProSitePatterns Protein kinases ATP-binding region signature. 364 385 IPR017441 GO:0005524(InterPro)
Mch8g1214 668 SUPERFAMILY Protein kinase-like (PK-like) 340 640 IPR011009 -
Mch8g1214 668 SMART LysM_2 158 202 IPR018392 -
Mch8g1214 668 Pfam LysM domain 161 196 IPR018392 -
Mch8g1214 668 ProSitePatterns Serine/Threonine protein kinases active-site signature. 477 489 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch8g1214 668 Pfam Protein tyrosine and serine/threonine kinase 363 638 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch8g1214 668 FunFam Kinase family protein 333 429 - -
Mch8g1214 668 ProSiteProfiles Protein kinase domain profile. 358 645 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g1214 668 ProSiteProfiles LysM domain profile. 157 201 IPR018392 -
Mch8g1214 668 Gene3D LysM domain 154 207 IPR036779 -
Mch8g1214 668 SUPERFAMILY LysM domain 157 202 IPR036779 -
Mch8g1214 668 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 28 657 IPR044812 GO:0019199(InterPro)|GO:0045087(InterPro)
Mch8g1214 668 SMART serkin_6 358 645 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g0338 Mch-Chr2:2497471 Mch8g1214 Mch-Chr8:8673383 2.23E-35 dispersed
Mch4g0260 Mch-Chr4:1693563 Mch8g1214 Mch-Chr8:8673383 9.43E-87 dispersed
Mch8g1214 Mch-Chr8:8673383 Mch6g0807 Mch-Chr6:5618986 6.07E-59 dispersed
Mch9g1794 Mch-Chr9:19809769 Mch8g1214 Mch-Chr8:8673383 1.23E-42 dispersed
Mch9g2276 Mch-Chr9:23015903 Mch8g1214 Mch-Chr8:8673383 1.60E-15 dispersed
Mch8g1214 Mch-Chr8:8673383 Mch8g3147 Mch-Chr8:33763076 2.23E-59 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77600 PF07714 PK_Tyr_Ser-Thr 1.00E-49 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g1214 - - - 0.0