Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g1233 ACAAACAATTTCGAGCGTATGCTTGGAGAAGGCGGTTTTGGAAGAGTTTACTATGGAAAAATCGAGAACACTGAAGTAGCTGTAAAGATGCTATCTCCTCAATCAGTTCAAGGGTATCGGCAATTTCAAGCAGAGGTTGACCTTCTTATGAGGGTTCATCATCGAAACCTGACCGGTCTTGTTGGGTACTGCAACGAATCGACCAACAAAGGACTTATCTATGAGTACATGGGCAGAGGGAACTTAGGATCTTTCATGACAGGTGGCAAGTCAGATTTGTTGAACTGGGAAGACAGGCTTCATATAGCAGTGGATGCAGCACAAGGATTGCAATACTTGCATTGTGGTATAAAGCCAGCTATTGTACATAGAGATGTAAAATCTTCCAACATCTTATTGGACGACAACTTTCGAGCAAAAGTATCTGATTTCGGTTTGTCGAGAATTTTTCCTGTCGACGATGGTGCCACTCATGTGACAACCAATGTGGTCGGCACTCCTGGTTACCTTGATCCTGAATATTACACATCTTACCGATTAAACGAGAAGAGCGACGTGTACGGCTTCGGAATTGTTCTTCTTGAAATCATAACTGGGAGACCAGTCTTGACAAAGACTCAAAACAAGGTAACTCACATCTATCAATGGGTCGACTCGATGCTTTCTCAAGGAGACATCAATTCCATTATCGACCCCAAATTGAAACAAGATTTCGACATGAACACCATTTGGAAAGCGGTTGAGATAGCAATGTGCTGTGCATCTCACGCCTCTACAAATCGGCCAACCATGAGCCAAGTT 801 43.2 TNNFERMLGEGGFGRVYYGKIENTEVAVKMLSPQSVQGYRQFQAEVDLLMRVHHRNLTGLVGYCNESTNKGLIYEYMGRGNLGSFMTGGKSDLLNWEDRLHIAVDAAQGLQYLHCGIKPAIVHRDVKSSNILLDDNFRAKVSDFGLSRIFPVDDGATHVTTNVVGTPGYLDPEYYTSYRLNEKSDVYGFGIVLLEIITGRPVLTKTQNKVTHIYQWVDSMLSQGDINSIIDPKLKQDFDMNTIWKAVEIAMCCASHASTNRPTMSQV 267
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 8863792 8865235 + MC08g1070 Mch8g1233 694854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g1233 267 SMART serkin_6 2 245 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g1233 267 SUPERFAMILY Protein kinase-like (PK-like) 4 267 IPR011009 -
Mch8g1233 267 Gene3D Transferase(Phosphotransferase) domain 1 78 267 - -
Mch8g1233 267 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch8g1233 267 PANTHER OS07G0107800 PROTEIN-RELATED 1 267 - -
Mch8g1233 267 Pfam Protein tyrosine and serine/threonine kinase 4 266 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch8g1233 267 ProSitePatterns Protein kinases ATP-binding region signature. 8 29 IPR017441 GO:0005524(InterPro)
Mch8g1233 267 Gene3D Phosphorylase Kinase; domain 1 8 77 - -
Mch8g1233 267 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 77 267 - -
Mch8g1233 267 ProSiteProfiles Protein kinase domain profile. 2 267 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch8g1233 Mch-Chr8:8863792 Mch9g0282 Mch-Chr9:2106827 4.94E-114 dispersed
Mch8g1232 Mch-Chr8:8851928 Mch8g1233 Mch-Chr8:8863792 1.86E-132 tandem
Mch8g1233 Mch-Chr8:8863792 Mch8g1234 Mch-Chr8:8867655 1.47E-140 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77603 PF07714 PK_Tyr_Ser-Thr 2.40E-45 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g1233 - - - 0.0