Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g1234 ATGAATGTTACTTTCACAAGTATTGATGGGAATCCAAATCTACAAGGGACAACACCAAGTGAAAAGAAGAAGAATAACATAGTAGTTCCTATAGTAGCAGCAGTTGCCGGTGTTATTATCATTGTAGTATTCATTTTAGCTCTTGTTTACTTCATTCGACGGAAAAGAAGTCTTAAAGGCCCAACCATAGTGGAGCCTCATTCACCACAAAATTCTCAAGTAGAACTTCATCCACATGAGCCATCACAGACACCAAGTCCAATACAGACACCAAGTCGACAATATTCCTACTCAGACATCTTAAAAATTACCAATAATTTTGGTAGACTATTGGGTGAAGGTGGGTTTGGAAAGGTTTATTATGGCCGAGTTGGTAGCACTGAAGTGGCTGTAAAGATGTTATCTCCAAAATCAGCTCAAGGGTATCGAGAATTTCAAGCAGAGGTGGATCTTCTCTTGAGAGTTCATCATAGAAACTTAACTAGTCTTGTTGGATATTGCAATGAAGGAGAGACAAAGATGGGGCTTGTCTATGAATACATGGGCAAAGGAAACTTGGGATCAATTCTTCTAGGTGGTAAAGGACAAGTGTTAAGATGGGAAGAAAGACTTCAAATAGCACTAGATTCAGCACAAGGATTGGAGTATCTACATAATGGTTGTAGACCACCAATTGTCCACAGGGATATCAAATCAAGCAACATTCTATTGAACGAATATTTACAAGCAAAACTTGCTGATTTTGGTCTCTCAAGAGCTTTTCCTACTGAAGGGGGCGCCACCCATGTGACAACCAAAGTGGTTGGAACTCCTGGCTACCTCGACCCTGAGTATTACACGTCGTACAGATTGACGGAGAAGAGTGATGTTTATAGCTTTGGAATCGTTATTCTAGAACTCATCACTGCGAGACCAGTATTAGTGAAAAGCAGTGAGAAAAGTCACATAATTCAGTGGGTTGATTCCAACCTTAATCAAGGTGATATCTATTCTATAGCTGACCCCAAAATAAAAGAAGATTGCAACATTAACTCTGTATGGAAAGCAGTGGACATAGGAATGTCCTGCACTGTCTATGATTCTGCAAACAGACCAACAATGAGTCAAGTTGTAAGTGAACTCAAA 1125 39.73 MNVTFTSIDGNPNLQGTTPSEKKKNNIVVPIVAAVAGVIIIVVFILALVYFIRRKRSLKGPTIVEPHSPQNSQVELHPHEPSQTPSPIQTPSRQYSYSDILKITNNFGRLLGEGGFGKVYYGRVGSTEVAVKMLSPKSAQGYREFQAEVDLLLRVHHRNLTSLVGYCNEGETKMGLVYEYMGKGNLGSILLGGKGQVLRWEERLQIALDSAQGLEYLHNGCRPPIVHRDIKSSNILLNEYLQAKLADFGLSRAFPTEGGATHVTTKVVGTPGYLDPEYYTSYRLTEKSDVYSFGIVILELITARPVLVKSSEKSHIIQWVDSNLNQGDIYSIADPKIKEDCNINSVWKAVDIGMSCTVYDSANRPTMSQVVSELK 375
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 8867655 8877874 + MC08g1071 Mch8g1234 694855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g1234 375 Gene3D Transferase(Phosphotransferase) domain 1 181 375 - -
Mch8g1234 375 PANTHER OS07G0107800 PROTEIN-RELATED 4 375 - -
Mch8g1234 375 MobiDBLite consensus disorder prediction 1 21 - -
Mch8g1234 375 SUPERFAMILY Protein kinase-like (PK-like) 81 374 IPR011009 -
Mch8g1234 375 ProSitePatterns Serine/Threonine protein kinases active-site signature. 225 237 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch8g1234 375 Pfam Protein tyrosine and serine/threonine kinase 107 374 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch8g1234 375 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 181 375 - -
Mch8g1234 375 MobiDBLite consensus disorder prediction 63 91 - -
Mch8g1234 375 ProSitePatterns Protein kinases ATP-binding region signature. 111 132 IPR017441 GO:0005524(InterPro)
Mch8g1234 375 MobiDBLite consensus disorder prediction 64 91 - -
Mch8g1234 375 Gene3D Phosphorylase Kinase; domain 1 87 180 - -
Mch8g1234 375 SMART serkin_6 105 375 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g1234 375 ProSiteProfiles Protein kinase domain profile. 105 375 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g1234 375 CDD STKc_IRAK 111 375 - -
Mch8g1234 375 FunFam Leucine-rich repeat receptor-like protein kinase 83 180 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch8g1232 Mch-Chr8:8851928 Mch8g1234 Mch-Chr8:8867655 6.05E-113 dispersed
Mch8g1234 Mch-Chr8:8867655 Mch9g0282 Mch-Chr9:2106827 3.96E-119 dispersed
Mch8g1230 Mch-Chr8:8837390 Mch8g1234 Mch-Chr8:8867655 1.39E-38 proximal
Mch8g1233 Mch-Chr8:8863792 Mch8g1234 Mch-Chr8:8867655 1.47E-140 tandem
Mch8g1234 Mch-Chr8:8867655 Mch8g1235 Mch-Chr8:8880273 1.25E-99 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77604 PF07714 PK_Tyr_Ser-Thr 3.20E-45 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g1234 - - - 0.0