Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch8g1248 | ATGAGTCGGGAGCAGAAGCGGGGGAAGCAGGACAAAGGTTCTGATGATGTCCAGAAGGTGATTGTTGCAGTGAAGGCTTCCAAAGAAATTCCAAAAACTGCTCTGGTTTGGGCGTTGACTCATGTTGTTCAACTTGGAGATTGCATAACTCTGCTGGTTGTTGTCCCTTCTCAAAGCTCTGGTAGAAAATTCTGGGGTTTCCCGAGATTTGCTGGGGACTGCGCAAGTGGTCACAAGAAAGCTCACTCTGGAACAAGCTCAGAGCAGAAATGCGATATTACCGATTCCTGCTCGCAGATGATCCTGCAGCTTCATGATGTTTATGATCCAAATAAGATAAATGTGAAAATCAAAATTGTCTCGGGGTCGCCCAGTGGGGCCGTTGCTGCTGAGGCTAAGAGAGCTCAAGCTAGCTGGGTTGTGTTAGACAAGCAGCTCAAACACGAGGAGAAATGTTGTATGGAGGAGTTACAATGCAACATTGTCGTAATGAAGCGATCACAGCCGAAAGTTCTTCGCTTGAACCTGGTTGGCTCTCCTAAGAAGGAATCAGAAGTGACCTCTCCATTACCTTCTGATATAGATGAAGGGTCTGAAAGCCATCAAAAAGAAAATAACGATCCTCTGGATTTTATTCGGGGACCAGTTGTGACGCCGAATAGCAGTCCAGAGCTGGGTACACCTTTTACCACCACCGAAGCTGGAACATCGTCTGTGTCAAGCTCAGATCCTGGAACTTCACCATTTTTCAACTCTGAAATGAATGGAGACACAAAGAAAGAGGAGCTGTTTGTTATCAAGGAAAATAAAGAACTTGATGCTGCCAGTTCAGATTCAGATAGTGAAAATTTATCGGTATCTTCAGCGAGTTTAAGGTTCCAACCATGGATGACGGAGTTTCTAAGTTCTCACCTTCAATCCTCACAACATATAAGTGGAAGGTCACAGAGATGTGATGACAGGAATCAAGTATCAACAAGAAAATCTTTTCTACCAAAGTCTTCAAAACTCGAAAGAGAATCTAGTATTGGAATTTCAAGCCATAGAAGCGACAATGACTTCCACGGGGACGTACGAGATGCGGTTTCGTTGTCAAGGAACACGCCACCAGGCCCCCCTCCATTATGTTCAATATGTCAACACAAGGCACCAGTTTTTGGAAAGCCTCCGAGGTGGTTCAGCTATGCCGAGCTGGAGCTCGCTACTGGTGGATTTTCACAAGCCAACTTTTTGGCAGAAGGAGGATATGGATCTGTTCACAGAGGGGTACTACCGGACGGGCAGGTGGTTGCTGTCAAGCAGCACAAATTAGCTAGTTCTCAGGGAGACCTTGAATTTTGTTCAGAAGTTGAAGTTCTTAGCTGTGCACAACATCGAAATGTCGTGATGTTGATCGGCTTCTGTATAGAGGAGAAAAGAAGGTTGCTGGTTTATGAATACATCTGCAATGGCTCATTGGATTCTCATTTATATGGACGCCAACAGGAGCCCTTGGAATGGTCTGCACGGCAAAAGATTGCCGTGGGAGCTGCGAGGGGGCTACGATATCTACATGAAGAATGTAGAGTGGGTTGCATTGTTCACCGGGATATGCGACCGAACAACATTCTTATTACCCATGATTTTGAACCACTGGTTGGAGATTTTGGCCTCGCGAGGTGGCAGCCCGATGGAGATACGGGTGTCGAAACAAGAGTTATTGGAACATTTGGGTATTTGGCTCCAGAGTATGCTCAGAGTGGCCAAATCACAGAAAAAGCTGATGTTTACTCCTTTGGGGTGGTACTGGTGGAGCTAATCACCGGACGAAAAGCCGTGGACCTTAGTCGGCCGAAAGGTCAACAGTGCCTCACTGAATGGGCGCGCCCATTGTTGGATGAACTGCTCATTGATGAACTCATTGATCCAAGGTTGGGAAATAGCTTTGCAGAGCATGAAGTGTACTGTATGCTGCACGCTGCATCGTTATGCATCCGAAGAGATCCTAACGCAAGGCCACGAATGTCGCAGGTTTTACGGATTCTGGAGGGTGACCTTGTCGTGGATGCTAATTACTTGTCGACTCCCGGGTACGACGTGGGAAATCGGAGCGGTCGGATATGGACAGAGCAGCAGCAGCAGCAAAACTACAGTGGCTCCTTATCAGATGAGACCCAAGAGAGATTCAATGAGAAGGTTTGTGTTGAGAGTTTAAGAGCAGGTTATTGGGAAAGGGACAAGACAAGGAGGAGCTCAAGTGGAAGTGATTTGTAA | 2253 | 46.65 | MSREQKRGKQDKGSDDVQKVIVAVKASKEIPKTALVWALTHVVQLGDCITLLVVVPSQSSGRKFWGFPRFAGDCASGHKKAHSGTSSEQKCDITDSCSQMILQLHDVYDPNKINVKIKIVSGSPSGAVAAEAKRAQASWVVLDKQLKHEEKCCMEELQCNIVVMKRSQPKVLRLNLVGSPKKESEVTSPLPSDIDEGSESHQKENNDPLDFIRGPVVTPNSSPELGTPFTTTEAGTSSVSSSDPGTSPFFNSEMNGDTKKEELFVIKENKELDAASSDSDSENLSVSSASLRFQPWMTEFLSSHLQSSQHISGRSQRCDDRNQVSTRKSFLPKSSKLERESSIGISSHRSDNDFHGDVRDAVSLSRNTPPGPPPLCSICQHKAPVFGKPPRWFSYAELELATGGFSQANFLAEGGYGSVHRGVLPDGQVVAVKQHKLASSQGDLEFCSEVEVLSCAQHRNVVMLIGFCIEEKRRLLVYEYICNGSLDSHLYGRQQEPLEWSARQKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILITHDFEPLVGDFGLARWQPDGDTGVETRVIGTFGYLAPEYAQSGQITEKADVYSFGVVLVELITGRKAVDLSRPKGQQCLTEWARPLLDELLIDELIDPRLGNSFAEHEVYCMLHAASLCIRRDPNARPRMSQVLRILEGDLVVDANYLSTPGYDVGNRSGRIWTEQQQQQNYSGSLSDETQERFNEKVCVESLRAGYWERDKTRRSSSGSDL | 750 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 9005223 | 9011438 | + | MC08g1083 | Mch8g1248 | 694869 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch8g1248 | 750 | Gene3D | Phosphorylase Kinase; domain 1 | 377 | 480 | - | - | |
Mch8g1248 | 750 | SUPERFAMILY | Protein kinase-like (PK-like) | 389 | 683 | IPR011009 | - | |
Mch8g1248 | 750 | ProSiteProfiles | Protein kinase domain profile. | 405 | 686 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch8g1248 | 750 | MobiDBLite | consensus disorder prediction | 308 | 357 | - | - | |
Mch8g1248 | 750 | MobiDBLite | consensus disorder prediction | 342 | 357 | - | - | |
Mch8g1248 | 750 | FunFam | Adenine nucleotide alpha hydrolase-like domain kinase | 377 | 480 | - | - | |
Mch8g1248 | 750 | FunFam | Adenine nucleotide alpha hydrolase-like domain kinase | 481 | 684 | - | - | |
Mch8g1248 | 750 | ProSitePatterns | Tyrosine protein kinases specific active-site signature. | 526 | 538 | IPR008266 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Mch8g1248 | 750 | MobiDBLite | consensus disorder prediction | 181 | 195 | - | - | |
Mch8g1248 | 750 | PANTHER | OS01G0750732 PROTEIN | 274 | 684 | IPR050885 | - | |
Mch8g1248 | 750 | MobiDBLite | consensus disorder prediction | 179 | 255 | - | - | |
Mch8g1248 | 750 | CDD | STKc_IRAK | 411 | 677 | - | - | |
Mch8g1248 | 750 | FunFam | Dual-specific kinase DSK1-like | 11 | 165 | - | - | |
Mch8g1248 | 750 | MobiDBLite | consensus disorder prediction | 220 | 254 | - | - | |
Mch8g1248 | 750 | Gene3D | Transferase(Phosphotransferase) domain 1 | 481 | 684 | - | - | |
Mch8g1248 | 750 | Gene3D | HUPs | 3 | 151 | IPR014729 | - | |
Mch8g1248 | 750 | Pfam | Protein tyrosine and serine/threonine kinase | 409 | 673 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch8g1248 | Mch-Chr8:9005223 | Mch8g3147 | Mch-Chr8:33763076 | 6.93E-97 | dispersed | |
Mch11g0220 | Mch-Chr11:1402084 | Mch8g1248 | Mch-Chr8:9005223 | 1.22E-190 | transposed | |
Mch4g1804 | Mch-Chr4:20968388 | Mch8g1248 | Mch-Chr8:9005223 | 4.46E-73 | transposed | |
Mch4g1821 | Mch-Chr4:21086977 | Mch8g1248 | Mch-Chr8:9005223 | 3.70E-88 | transposed | |
Mch9g1693 | Mch-Chr9:18912012 | Mch8g1248 | Mch-Chr8:9005223 | 2.28E-92 | transposed | |
Mch2g0990 | Mch-Chr2:6691668 | Mch8g1248 | Mch-Chr8:9005223 | 3.39E-72 | transposed | |
Mch6g0903 | Mch-Chr6:6343844 | Mch8g1248 | Mch-Chr8:9005223 | 1.17E-279 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
77606 | PF07714 | PK_Tyr_Ser-Thr | 1.40E-40 | CL0016 | Mch | PK |
Pathway information
