Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch8g1252 | ATGGATTCTTTGTTGATTTTTGTGCAGCTCATCACAGCTGCAGCTCTCATATCTTCCACATTAATCATAATCTTCCTCCTCACCTTTAAGCCCAATTCACCAGCTTCAAACTCCATCCCTTCGCTTCCTTCGGGCTCCCTTGGTCTCCCCTTCATCGGCGAAACCCTCCAGTTCGTTTCTTCCGCTTACTCCCACCGCCCCGAAAGCTTCATGGATAGACGTCGCTGCTGGTATGGGAAGGTTTTCAAGTCACACATATTTGGAAGTCCAACAATAGTTTCAACTGATGGTGAAGTGAGTAGGTTTATTCTGCAAAGTGATGCAAGGACTTTTGTGCCATGTTATCCAAAATCTTTGACAGAGTTGATGGGGAAGTCTTCAATTTTGCTCATCAATGGCAGCTTGCATAGGAGAATTCATGGCCTTATTGGAGCTTTCTTCAAGTCATCTCATCTCAAAGCTCAATTAACCAAACACATGCACAAATATCTTCAAAATTCTATCTCTATTTGGACTACTACATGTCAACACAATCCTATCCACATACAAGATGAAGCCAAAAGTATTGCCTTTGAAGTTCTAGTGAAGACACTGATCAGTTTGGACCCTGGAGAAGAAATGGAATTTCTCAAGAAACAGTTCAAAGAATTCATTGCTGGCCTTATGGCTCTCCCAATTAACATCCCAGGAAGCAGACTCTACACATCATTACAGGCCAGCAAAAGGAAAATGGTTAAGTTTGTGGAAGAAATAATACAAGCCAGAAGAAAGCAAAAGATGAGTGAGAGTTTGAATAATAATAACAAGGTCCCAAAAGATGTTGTGGATGTTCTGCTGAATGATGGAAGCCATGAAATTACAGATGATTTAATAGCTGAGAATGTCATTGATATGATGATTCCAGGCCAAGATTCAGTCCCAATCCTTATGACTTTGGCCATAAAATACCTTTCTGATTGCCCCGCCGCACTTCAACAATTAAGGGAAGAAAACATGGAGTTGAAAAGACAGAAAACTCAGCTTGGGGAGTCATCCAAGTGGAACGATTACTTGTCATTACCATTTACACAAAATGTTATAATGGAGACGCTAAGGATGGGAAACATTATAACGGGAGTGATGAGAAAGGCCATGAAGGACATCGAGATAAAAGGGTATTTAATACCTAAAGGGTGGTGTATCCTTTTATATTTTAGGTCAGTTCATCTCGATGAAAACCACTTTGAAAGCCCTTACCATTTCAATCCATGGAGGTGGCAAGATAAAGACTCAAATAACCCCAACTTCACTCCTTTTGGAGGGGGGCTAAGGTTGTGCCCTGGGCTTGAATTGGCCAGACTTGAAGCTTCCATTTTCTTACACCATTTTGTCACTGAATTCAGGTGGGTGGCTGAGAAAGACACTGTTATCAGCTTCCCAACAGTTAGAATGAAGAAGAGAATGGCAGTTTGGTTGAAGAGAAGGGAG | 1467 | 41.45 | MDSLLIFVQLITAAALISSTLIIIFLLTFKPNSPASNSIPSLPSGSLGLPFIGETLQFVSSAYSHRPESFMDRRRCWYGKVFKSHIFGSPTIVSTDGEVSRFILQSDARTFVPCYPKSLTELMGKSSILLINGSLHRRIHGLIGAFFKSSHLKAQLTKHMHKYLQNSISIWTTTCQHNPIHIQDEAKSIAFEVLVKTLISLDPGEEMEFLKKQFKEFIAGLMALPINIPGSRLYTSLQASKRKMVKFVEEIIQARRKQKMSESLNNNNKVPKDVVDVLLNDGSHEITDDLIAENVIDMMIPGQDSVPILMTLAIKYLSDCPAALQQLREENMELKRQKTQLGESSKWNDYLSLPFTQNVIMETLRMGNIITGVMRKAMKDIEIKGYLIPKGWCILLYFRSVHLDENHFESPYHFNPWRWQDKDSNNPNFTPFGGGLRLCPGLELARLEASIFLHHFVTEFRWVAEKDTVISFPTVRMKKRMAVWLKRRE | 489 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 9026890 | 9032767 | - | MC08g1086 | Mch8g1252 | 694873 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch8g1252 | 489 | Gene3D | Cytochrome P450 | 32 | 488 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch8g1252 | 489 | Coils | Coil | 324 | 344 | - | - | |
| Mch8g1252 | 489 | SUPERFAMILY | Cytochrome P450 | 40 | 488 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch8g1252 | 489 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 432 | 441 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Mch8g1252 | 489 | FunFam | 3-epi-6-deoxocathasterone 23-monooxygenase CYP90D1 | 32 | 488 | - | - | |
| Mch8g1252 | 489 | Pfam | Cytochrome P450 | 43 | 467 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch8g1252 | 489 | PANTHER | CYTOCHROME P450 26 | 41 | 460 | - | GO:0004497(PANTHER)|GO:0007275(PANTHER)|GO:0010268(PANTHER)|GO:0016125(PANTHER)|GO:0016132(PANTHER)|GO:0016491(PANTHER)|GO:0016709(PANTHER) | |
| Mch8g1252 | 489 | CDD | CYP90-like | 78 | 481 | - | - | |
| Mch8g1252 | 489 | PRINTS | E-class P450 group I signature | 357 | 375 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch8g1252 | 489 | PRINTS | E-class P450 group I signature | 75 | 94 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch8g1252 | 489 | PRINTS | E-class P450 group I signature | 290 | 307 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch8g1252 | 489 | PRINTS | E-class P450 group I signature | 429 | 439 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch8g1252 | 489 | PRINTS | E-class P450 group I signature | 439 | 462 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch8g1252 | 489 | PRINTS | E-class P450 group I signature | 397 | 421 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch1g1548 | Mch-Chr1:16785275 | Mch8g1252 | Mch-Chr8:9026890 | 1.62E-156 | dispersed | |
| Mch8g1252 | Mch-Chr8:9026890 | Mch6g1963 | Mch-Chr6:22093606 | 6.93E-15 | dispersed | |
| Mch9g1476 | Mch-Chr9:17187767 | Mch8g1252 | Mch-Chr8:9026890 | 6.53E-115 | transposed | |
| Mch8g1252 | Mch-Chr8:9026890 | Mch9g0259 | Mch-Chr9:1937654 | 1.45E-235 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mch8g1252 | K12638 | - | csv:101212581 | 749.584 |