Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch8g1293 | GCAATGGTTATTTTTCTAACGACAGCTCTACTGATCTTAATTTCATCGCTCGCAAAGATTGCATATGATACAATCTCATGCTACTGGCTCACGCCGAGGCGGATTAGGAAGACGATGGCAAAGCAAGGCGTCCACGGCCCCGACCCGCGCCCGCTGACCGGAAACATCCTCGACATGGCAGCGCTCGTGGCAAAATCCACAGCCAATGACATGACCTCCATCAATCATGACATCGTTGGCCGTCTATTCCCGCATTACGTTGCGTGGACAAAGCAATACGGTAAAAGATTTATATACTGGAATGGGACAGAGCCAAGGCTGTGTTTGGCAGAAATGGAATTGATAAAAGAGCTATTGGGAAAAAACAGCAGTGTTTGTGGGAAATCATGGTTGCAAAGACAAGGAACCAAACACTTCATAGGGAAAGGACTATTAATGGCCAATGGGGAAAAATGGTATCACCAACGTCACATCCTTGCCCCTGCCTTTATGGGCCAAAAACTCAAGAGCTATGCGGGGTACATGGTGGAATGCACTAAGAACATGATCCAATCACTCCAGACCGAGCTAAACTCGGGCCGAACTGAGTTCGAGATTGCCGAGTACATGAAGCAACTCACCGCAGATATCATCTCTCGGACGGAGTTCGATAGTAACTACGACAAAGGGAAGCAAATCTTTCATTTACTCACTCTTCTTCAGCGCCTTTGCGCCCAAGCCAGCCGCCACCTTTGCCTCCCAGGCAGTCGATTCTTCCCAAGCCAATACAACAGAGAAATAAAGTCACTAAAAATGGAGGTGGAGAGGCTGCTGATGGAGATCATTGAGAGCAGAAAAGATGGTGTGGAGATTGGAAGAAGCAGTTGCTATGGAAATGATTTGTTGGGAATGCTATTGAATGAGATGCAGAGGCCTAAGAGAGAAGATGGATTAAGCTTGAACTTGCAGCTGATAATGGATGAATGCAAAACTTTCTTCTTTGCTGGCCATGAAACCACTGCCCTTTTGCTCACTTGGACCATCATGTTGTTGGCCACTAACCCTAATTGGCAACACAAGCTTCGTGCTCAAATCAACCAAGTTTGTAATGGTGCAACTCCCACTCTTGACGATCTCTCTCAACTCACTTTGCTAAACATGGTGATAAACGAATCCTTGAGACTTTACCCACCGGCCACGGTGCTTCCGAGAATGGCGTTCGAAGACATAAAGCTAGGAGATTTGGAGATCCCGAAAGGGCTATCGATATGGATCCCGGTGCTTGCGATCCATCACAGCGAAGAGTTGTGGGGAAAAGATGCAAACGAGTTCAACCCCGAAAGATTCGCATTGAAATCATCGAGTGCGGGACGATTCATTCCATTTGCAGCTGGACCAAGAAACTGCATTGGCCAAGCTTTTGCAATGATGGAAGCTAAGATCATCTTGGCCATGTTCCTCTCAAAGTTTAGCTTCACTATTTCAGATACATATCGCCATGCTCCTGTTATTGTTCTTACCATACAGCCTAAGTATGGAGTTCAAGTTTGTTTGACGCCATTGAATTCTTGA | 1551 | 46.36 | AMVIFLTTALLILISSLAKIAYDTISCYWLTPRRIRKTMAKQGVHGPDPRPLTGNILDMAALVAKSTANDMTSINHDIVGRLFPHYVAWTKQYGKRFIYWNGTEPRLCLAEMELIKELLGKNSSVCGKSWLQRQGTKHFIGKGLLMANGEKWYHQRHILAPAFMGQKLKSYAGYMVECTKNMIQSLQTELNSGRTEFEIAEYMKQLTADIISRTEFDSNYDKGKQIFHLLTLLQRLCAQASRHLCLPGSRFFPSQYNREIKSLKMEVERLLMEIIESRKDGVEIGRSSCYGNDLLGMLLNEMQRPKREDGLSLNLQLIMDECKTFFFAGHETTALLLTWTIMLLATNPNWQHKLRAQINQVCNGATPTLDDLSQLTLLNMVINESLRLYPPATVLPRMAFEDIKLGDLEIPKGLSIWIPVLAIHHSEELWGKDANEFNPERFALKSSSAGRFIPFAAGPRNCIGQAFAMMEAKIILAMFLSKFSFTISDTYRHAPVIVLTIQPKYGVQVCLTPLNS | 516 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 9398567 | 9401870 | + | MC08g1124 | Mch8g1293 | 694914 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch8g1293 | 516 | Gene3D | Cytochrome P450 | 28 | 515 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch8g1293 | 516 | Pfam | Cytochrome P450 | 86 | 490 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch8g1293 | 516 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 10 | 507 | IPR050665 | GO:0004497(PANTHER) | |
| Mch8g1293 | 516 | Coils | Coil | 260 | 280 | - | - | |
| Mch8g1293 | 516 | PRINTS | P450 superfamily signature | 380 | 391 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch8g1293 | 516 | PRINTS | P450 superfamily signature | 328 | 345 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch8g1293 | 516 | PRINTS | P450 superfamily signature | 462 | 473 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch8g1293 | 516 | PRINTS | P450 superfamily signature | 453 | 462 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch8g1293 | 516 | PRINTS | E-class P450 group I signature | 90 | 109 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch8g1293 | 516 | PRINTS | E-class P450 group I signature | 337 | 363 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch8g1293 | 516 | PRINTS | E-class P450 group I signature | 317 | 334 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch8g1293 | 516 | PRINTS | E-class P450 group I signature | 420 | 444 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch8g1293 | 516 | PRINTS | E-class P450 group I signature | 462 | 485 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch8g1293 | 516 | PRINTS | E-class P450 group I signature | 452 | 462 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch8g1293 | 516 | PRINTS | E-class P450 group I signature | 206 | 224 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch8g1293 | 516 | SUPERFAMILY | Cytochrome P450 | 47 | 513 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch1g0879 | Mch-Chr1:12161655 | Mch8g1293 | Mch-Chr8:9398567 | 1.27E-35 | dispersed | |
| Mch8g1293 | Mch-Chr8:9398567 | Mch8g3105 | Mch-Chr8:33444075 | 2.96E-117 | dispersed | |
| Mch8g1293 | Mch-Chr8:9398567 | Mch4g2441 | Mch-Chr4:25354349 | 1.24E-295 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mch8g1293 | K10717 | - | csv:101213604 | 878.626 |