Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch8g1294 | TTTCCACTTTCGCCCCTTAAATACCCTCTTGTACTTTCGTTCTCAAATCCTGAAAACTCTTTTTCCCCCAATTTCTCTCTCTCTCTCTGGTTCTTCTTCGGATTTTATGCTTCAATTCTGCCATTGTTGTTGCTCAAAATGCGGATGAGTTGTAATGGTTGCAGAGTACTTCGCAAAGGTTGCAGCGAAAATTGCAGTATTCGCCCCTGTTTGCACTGGATTAAGAGCCCTGAATCTCAGGCCAACGCCACCGTTTTTCTCGCCAAGTTCTACGGCCGCGCCGGCCTTATGAACCTCATCAACGCCGGTCCTGACCATCTCCGCCCTGCGATCTTTAGATCTCTGCTGTACGAGGCTTGCGGCCGGATTGTGAATCCGATTTACGGATCGGTAGGGTTGTTGTGGTCCGGGAGTTGGCAGCTCTGTCAGGCCGCCGTCGAGGCGGTGCTTAAAGGCGCTCCGATCACGCCGATAAACTCCGAAGCGGCGGCTACCGGCGATGGACCGCCGCTCAAGGCCTATGACATTCGTCACGTTTCCAAGGATGAGAACTCTGCCGCCTCCAACGACGGCGGAGTCCACCGCCGAGTCAAGACTCGGTGCCGGTTCAAGCGGTCGGTCGTCAAGCCGAAAGCGAGTAAAGGACTCGCCTCCGTCGTTGAGTCGACTCGGGGATTGTGCTCCACTGAGTTGAACCGGTCGTCGAGCGGCGAGTCGTCGCTGAGTCACCAATCCGACTCGCCGCACCTCGAGAACGAGAGCAAAGAGACGGAGAGCATGATCTCGGTGGAGACGATTTCTCCTCCTCCGCCGTCGTCGGCGCTTTTCCGATCGGAGTCGACTTCGGTGCCGAAAACCACCGCCAACGGCGGAGCAACTGCAGAAAGTGAATTAGCTCTAGAGCTGACCCTGGGAATTGAGCCGGTGTCGCGTGCCCAGCACGTGATTCCAATGAAGAAGCGGAAGATAGAGGCCGACGGTGGGTTCAGGCCCAGTAACGACGCGTGCAATACGGTTTTGGGCCTGGATTTTGCAGCCTAA | 1041 | 55.81 | FPLSPLKYPLVLSFSNPENSFSPNFSLSLWFFFGFYASILPLLLLKMRMSCNGCRVLRKGCSENCSIRPCLHWIKSPESQANATVFLAKFYGRAGLMNLINAGPDHLRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAAATGDGPPLKAYDIRHVSKDENSAASNDGGVHRRVKTRCRFKRSVVKPKASKGLASVVESTRGLCSTELNRSSSGESSLSHQSDSPHLENESKETESMISVETISPPPPSSALFRSESTSVPKTTANGGATAESELALELTLGIEPVSRAQHVIPMKKRKIEADGGFRPSNDACNTVLGLDFAA | 346 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 9423086 | 9424545 | - | MC08g1125 | Mch8g1294 | 694915 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch8g1294 | 346 | PIRSF | AS2 | 47 | 337 | IPR017414 | - | |
Mch8g1294 | 346 | Pfam | Lateral organ boundaries (LOB) domain | 50 | 148 | IPR004883 | - | |
Mch8g1294 | 346 | MobiDBLite | consensus disorder prediction | 259 | 292 | - | - | |
Mch8g1294 | 346 | MobiDBLite | consensus disorder prediction | 230 | 292 | - | - | |
Mch8g1294 | 346 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 38 | 47 | 307 | - | GO:0010468(PANTHER) | |
Mch8g1294 | 346 | ProSiteProfiles | LOB domain profile. | 49 | 155 | IPR004883 | - | |
Mch8g1294 | 346 | MobiDBLite | consensus disorder prediction | 230 | 247 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch11g0355 | Mch-Chr11:2185633 | Mch8g1294 | Mch-Chr8:9423086 | 7.30E-51 | dispersed | |
Mch1g1274 | Mch-Chr1:14957182 | Mch8g1294 | Mch-Chr8:9423086 | 1.03E-50 | dispersed | |
Mch8g1294 | Mch-Chr8:9423086 | Mch9g1958 | Mch-Chr9:20983539 | 6.64E-64 | dispersed | |
Mch8g1294 | Mch-Chr8:9423086 | Mch6g0374 | Mch-Chr6:2484246 | 5.25E-88 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
43861 | PF03195 | LOB | 2.40E-24 | No_clan | Mch | TF |
Pathway information
