Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g1301 GAAGCTTCCCAAACGCCGGAGGAGATTATACTACGCTGGGACTCCGCCGCGCCGGAGGAGCTCAAGGATACCATGATTTTTGACTCCGACCGGCAAGAGATCGACCGCTACTTACGGGCCGTCGACGAAATCCAGAGGTCCATGTCGTCGGCCTCCGTGTCGGACGATCAGAACAAAGTCGATTCCACTATGCAGATCGCCATGGCCAGGCTTGAGGATGAGTTCCGTCACATTCTGTCCAGTCACACCACTCCGATCGAGGTCGAGTCGCTTACCGATCCCAGCCCCTCTTCTCGCAACATGTCCACCACCGCCGGTGGTGTGTTCGAGGATGACAACGACGAGGAAGCCGATTTACCGGAAGTTCAGCTCGATTTAAGTGGTAGTCCCAGTTTTGGCTCCAGTGGACGATCCAGCTATCGGGCGACCAGCAGTATTCGCGAAATCGATCTCATACCTTCCGATGCGATTATCGATCTACGAAGTATTGCGGAGCGGATGATATCGGCGGGGTACCTGCGGGAGTGTATTCAAGTCTACGGCAGTGTGCGAAAGTCCACCTTCGACTCCAGCTTCCGACGGCTCGGAATCGAGAAGCTGAGCATTGGAGATATTCAGAGGCTGGATTGGAACGAGCTGGAAACGAAGATCAGAAGGTGGATTAGAGCAGCAAAGGTTTCTATTAGGACTTTGTTTGCCAGCGAGAAGAAGCTCTGCGAGCAAATCTTTTACGGCATAGGGACCGCCATAGACGATGCTTGTTTCATGGAGACCGTTAAAGGCCCCGTGACGCAGTTGTTCAATTTCGCCGAAGCGATCAGTATAAGCCGCAGGTCGCCGGAGAAGCTGTTCAAGATTCTAGACCTCCACGATGCCTTAACGGATTTGATACCTGACATTGACGTGATATTCGAATCAAAATCCGCGGAATATATTCGGATTCAAGCGGCGGAGATATTGTCGCGGCTGGCGGAGGCCGTCAGGGGCACTTTATCTGAGTTTGAAAACGCCGTGCTGCGAGAGCCGTCGCTGCTTCCGGTGCCCGGCGGGACGCTTCATCCCTTGACAAGGTATGTAATGAACTATGTGAGTCTGATTTCCGATTACAAAGTGACCTTAGACGAGCTCATCGTGTCGAAACCATCGACGGGCTCGAGGTACTCCGCCGACCCCACAACCCCAGACATGGACTTCGCCGAGCTAGAGGGCAAAACGCCATTAGCGCTGCATCTGATATGGAGCATCGTGATTCTGCAGTTCAATTTGGAGGGAAAGTCCAGGCACTACAAAGACCCTTCTCTAGCTCATCTCTTCATCATGAACAACGTTCATTACATCGTACAGAAGATCAAAGGATCCCCTGAATTGCGAGAAATGATAGGAGACGTTTATCTGAGAAGGCTAACCGGGAAGTATCGGCAGGCGGCGACAAACTACGAGAGAACGACGTGGGTGAACGTGCTGTATTGCCTGCGAAATGAGGGGTTGCACGTCAGCAGGGGCTTCTCTTCCGCTATCTCAAAGAGCGCTGTTAGAGACAGATTCAAGACTTTCAACGCCATGTTTGAGGAGGTTCACAGGACACAATCGACATGGCTGATTCCAGATTCTCAGCTGAGGGAGGAGCTTCGCATATCCATAACCGAGAAGTTGATTCCAGCCTACAGGTCATTTCATGGCCTCCATGGCCACCACATTGAGAGTGGAAAGCACCCAGAAAATTACATCAAGTACTCGGTCGAGGAACTGGAAAATGCCATCTTGGATTTCTTTGAGGGTTGCTCAGTAGGCCATAACTTGAGAAGGAGATCTCAC 1815 51.9 EASQTPEEIILRWDSAAPEELKDTMIFDSDRQEIDRYLRAVDEIQRSMSSASVSDDQNKVDSTMQIAMARLEDEFRHILSSHTTPIEVESLTDPSPSSRNMSTTAGGVFEDDNDEEADLPEVQLDLSGSPSFGSSGRSSYRATSSIREIDLIPSDAIIDLRSIAERMISAGYLRECIQVYGSVRKSTFDSSFRRLGIEKLSIGDIQRLDWNELETKIRRWIRAAKVSIRTLFASEKKLCEQIFYGIGTAIDDACFMETVKGPVTQLFNFAEAISISRRSPEKLFKILDLHDALTDLIPDIDVIFESKSAEYIRIQAAEILSRLAEAVRGTLSEFENAVLREPSLLPVPGGTLHPLTRYVMNYVSLISDYKVTLDELIVSKPSTGSRYSADPTTPDMDFAELEGKTPLALHLIWSIVILQFNLEGKSRHYKDPSLAHLFIMNNVHYIVQKIKGSPELREMIGDVYLRRLTGKYRQAATNYERTTWVNVLYCLRNEGLHVSRGFSSAISKSAVRDRFKTFNAMFEEVHRTQSTWLIPDSQLREELRISITEKLIPAYRSFHGLHGHHIESGKHPENYIKYSVEELENAILDFFEGCSVGHNLRRRSH 605
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 9489431 9491245 + MC08g1132 Mch8g1301 694922
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g1301 605 Gene3D Exocyst complex component Exo70 129 600 - -
Mch8g1301 605 Gene3D Exocyst complex component Exo70 9 116 - -
Mch8g1301 605 SUPERFAMILY Cullin repeat-like 19 592 IPR016159 -
Mch8g1301 605 MobiDBLite consensus disorder prediction 85 113 - -
Mch8g1301 605 MobiDBLite consensus disorder prediction 85 107 - -
Mch8g1301 605 Pfam Exocyst complex component Exo70 N-terminal 7 80 - -
Mch8g1301 605 PANTHER EXOCYST COMPLEX PROTEIN EXO70 7 593 IPR004140 GO:0000145(InterPro)|GO:0000145(PANTHER)|GO:0006887(InterPro)|GO:0006887(PANTHER)
Mch8g1301 605 Pfam Exo70 exocyst complex subunit C-terminal 219 589 IPR046364 GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch5g0938 Mch-Chr5:6972480 Mch8g1301 Mch-Chr8:9489431 1.37E-102 dispersed
Mch5g1814 Mch-Chr5:18477719 Mch8g1301 Mch-Chr8:9489431 1.26E-92 dispersed
Mch6g0064 Mch-Chr6:380659 Mch8g1301 Mch-Chr8:9489431 3.03E-144 dispersed
Mch8g1301 Mch-Chr8:9489431 Mch9g1872 Mch-Chr9:20415757 1.99E-118 dispersed
Mch8g1301 Mch-Chr8:9489431 Mch3g1347 Mch-Chr3:16160475 7.34E-144 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g1301 K07195 - csv:101204229 1086.63