Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g1314 ATGCAACTAGTACCAAATGATGATGAAAATAACGAAGATATTCTGGAACGTGCACCCATTTTAAGTCAATTGGATTTTGTGTCGCAGTCTGTGGAATCATCATGTTCTGCCGAGATTATATCTATAGGGAGAGAGAGCTCTGTCAGCGACGACGATTTACAAAATCTTCATGTTGATGAAACTAGTCATCTGGTGAATGCAGACCAACCACAATGTCGTATATGCCTTGAGACTGGAGGAGAAGATTTAATTGCTCCATGCCACTGCAGAGGCACTCAAAAGTATGTGCATAGATTATGTCTTGATAACTGGAGGTCCACAAAGGAGGGTTTTGCTTTTGCACATTGTACGGAGTGCAGAGCTATGTTTGTGTTACGTGCAAATGTCCCTCCTGATCGCTGGTGGTTGAGACTAAAGTTCCAGTTTCTCGTTGCTAGGGACCATGCGTTCATTTTTATTATTGTTCAGCTGATTGTGGCATTCTTGGGGGTGTTGGTGTACAAATTCTACGGAGAGGAACTCAGGGAAATGTTTGGATATGAAGAACACCCGTATGGGTTCTATGCCATGGCTGTCTTGGCTATCATCTTGGTCGGTTTACTCTATGGTTTCTTCATAGCCATTATTTGCGGACAGAGGATAAATGAACGCCATTACCATGTCCTTGCTAAGCAAGAACTGACAAAGGAATACATAGTCGAAGATCGAGAACATAACAAGAATGTTCCTGAACTGGATCCCAGTCATGTTATGGAGCTAAGGATGTTGGGCCTATATTAA 780 42.44 MQLVPNDDENNEDILERAPILSQLDFVSQSVESSCSAEIISIGRESSVSDDDLQNLHVDETSHLVNADQPQCRICLETGGEDLIAPCHCRGTQKYVHRLCLDNWRSTKEGFAFAHCTECRAMFVLRANVPPDRWWLRLKFQFLVARDHAFIFIIVQLIVAFLGVLVYKFYGEELREMFGYEEHPYGFYAMAVLAIILVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYIVEDREHNKNVPELDPSHVMELRMLGLY 259
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 9556476 9560607 - MC08g1145 Mch8g1314 694935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g1314 259 SUPERFAMILY RING/U-box 67 123 - -
Mch8g1314 259 ProSiteProfiles Zinc finger RING-CH-type profile. 64 126 IPR011016 GO:0008270(InterPro)
Mch8g1314 259 Pfam RING-variant domain 72 119 IPR011016 GO:0008270(InterPro)
Mch8g1314 259 SMART ringv_2 71 120 IPR011016 GO:0008270(InterPro)
Mch8g1314 259 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 191 259 - -
Mch8g1314 259 CDD RING_CH-C4HC3_MARCH 72 120 - -
Mch8g1314 259 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 65 124 IPR013083 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch6g0759 Mch-Chr6:5212903 Mch8g1314 Mch-Chr8:9556476 1.43E-42 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g1314 - - - 0.0