Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch8g1314 | ATGCAACTAGTACCAAATGATGATGAAAATAACGAAGATATTCTGGAACGTGCACCCATTTTAAGTCAATTGGATTTTGTGTCGCAGTCTGTGGAATCATCATGTTCTGCCGAGATTATATCTATAGGGAGAGAGAGCTCTGTCAGCGACGACGATTTACAAAATCTTCATGTTGATGAAACTAGTCATCTGGTGAATGCAGACCAACCACAATGTCGTATATGCCTTGAGACTGGAGGAGAAGATTTAATTGCTCCATGCCACTGCAGAGGCACTCAAAAGTATGTGCATAGATTATGTCTTGATAACTGGAGGTCCACAAAGGAGGGTTTTGCTTTTGCACATTGTACGGAGTGCAGAGCTATGTTTGTGTTACGTGCAAATGTCCCTCCTGATCGCTGGTGGTTGAGACTAAAGTTCCAGTTTCTCGTTGCTAGGGACCATGCGTTCATTTTTATTATTGTTCAGCTGATTGTGGCATTCTTGGGGGTGTTGGTGTACAAATTCTACGGAGAGGAACTCAGGGAAATGTTTGGATATGAAGAACACCCGTATGGGTTCTATGCCATGGCTGTCTTGGCTATCATCTTGGTCGGTTTACTCTATGGTTTCTTCATAGCCATTATTTGCGGACAGAGGATAAATGAACGCCATTACCATGTCCTTGCTAAGCAAGAACTGACAAAGGAATACATAGTCGAAGATCGAGAACATAACAAGAATGTTCCTGAACTGGATCCCAGTCATGTTATGGAGCTAAGGATGTTGGGCCTATATTAA | 780 | 42.44 | MQLVPNDDENNEDILERAPILSQLDFVSQSVESSCSAEIISIGRESSVSDDDLQNLHVDETSHLVNADQPQCRICLETGGEDLIAPCHCRGTQKYVHRLCLDNWRSTKEGFAFAHCTECRAMFVLRANVPPDRWWLRLKFQFLVARDHAFIFIIVQLIVAFLGVLVYKFYGEELREMFGYEEHPYGFYAMAVLAIILVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYIVEDREHNKNVPELDPSHVMELRMLGLY | 259 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 9556476 | 9560607 | - | MC08g1145 | Mch8g1314 | 694935 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch8g1314 | 259 | SUPERFAMILY | RING/U-box | 67 | 123 | - | - | |
Mch8g1314 | 259 | ProSiteProfiles | Zinc finger RING-CH-type profile. | 64 | 126 | IPR011016 | GO:0008270(InterPro) | |
Mch8g1314 | 259 | Pfam | RING-variant domain | 72 | 119 | IPR011016 | GO:0008270(InterPro) | |
Mch8g1314 | 259 | SMART | ringv_2 | 71 | 120 | IPR011016 | GO:0008270(InterPro) | |
Mch8g1314 | 259 | PANTHER | RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN | 191 | 259 | - | - | |
Mch8g1314 | 259 | CDD | RING_CH-C4HC3_MARCH | 72 | 120 | - | - | |
Mch8g1314 | 259 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 65 | 124 | IPR013083 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch6g0759 | Mch-Chr6:5212903 | Mch8g1314 | Mch-Chr8:9556476 | 1.43E-42 | dispersed |
Pathway information
