Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g1318 ATGCGCGCACCAGCCCCAACCATCAGCGCCGCGTTATTCATCTTCTTCCACCTGTTTCTCTTACTCTCCTCATGCATGGTCTTATCGGTGCATGCGGCACCTTCCGATGCCGAAACTCTCCTTCAATTCAAGCGCTCGTTAACCTCCGCCACCGCGCTTCACAACTGGGTTCCCTCTGTCCCGCCTTGCGAAAACCACAAGTCAAACTGGGCGGGCGTGCTTTGTTTACACGGCCATGTTAGGGGCCTGAGGCTTGAGAATATGGGGCTTAAGGGCGATGTTGATGTAGATCCCTTGGTTTCTTTAACTCGTTTGCGCACCCTCAGCTTCATGAACAACACCTTGGTTGGGCCTTGGCCTTCTGTTATAAGCAAATTATGGAGTTTGCGCTCCCTCTATCTTTCCTATAACCACTTCTCAGGAGAAATTCCGGACGATGCCTTTACGGGTATGAAATTTTTGAAGAAAGTGTTTTTGACCAATAATGAATTCAACGGCCAAATTCCCTCATCTCTCGCTTCACTGTCTAGGCTTATGGAGTTGAGACTTGATGGAAACAAATTCAAAGGCCATGTTCCCGACCTTCGAATGGATACTTTGAAGCGCCTTAATGTTTCCAACAATGTCTTGGAGGGCCCAATACCTAAGAGCTTAAGCCACATGGATCCTTCATGTTTTTCAGGTAACAGTATGTGTGGAGGTCCTCTCCCAGCATGCGAGAAATCCAAGTTGTCATCGGCGGGGCTGCTAAGAATTGCGATAATACTGTTAATTTTGGGGATAATATTAGCCATGATTTCTTCCATTTGCATCATATTGAATCTAAGGAAGCAGCCTGCGCTACAATTAGGAAAGGGGAATGGGAAGAGCCCAGGTATCATCGAAGAGGAGAACAATAAGTACGTGGGCAAGCAAGCCGCAGGGGATGTATACAGATCGACTGATTCATCAGTATCAACGTCGTCGGTTGCGCAGACGACGTCGAGGAGGGCGGGAGCAGACCAAGGAAAACTATTGTTCGTTAGGGACGACAGGGAGAGGTTCGACTTACAGGACTTGTTGAGAGCGTCGGCGGAAATATTAGGGAGCGGATCATTTGGGTCGTCCTACAAAGCAACCATACTTTGCAATGCAGTGGTGGTGAAGCGGTACAAGCAAATGAACAACGTAGGAAGGGAGGAGTTTCACGAGTACATGAGAAGGCTGGGCAGATTGACGCATCAAAATCTACTCCCACTGGTTGCGTATTATTACAGGAAGGAAGAGAAGTTGTTGATCTCAGACTTTGTAGATAACGGGAGTTTGGCCAGCCATTTGCATGGTAACCACAATGATGAGGAGACAGGCCTGGAGTGGGCCACAAGGCTAAAGATCATAAAAGGCATAGCAAGGGGGCTGTCTTATCTCTACACCTCCCTGCCCAGCATTGTTGCACCACATGGCCATCTCAAATCCTCAAATGTGCTGCTGGACGACTCCTTCGAGCCTCTACTCACGGACTACGGTCTGCTCCCTGTTGCCAACATAGAGCATGGGCAGACACTGATGATGGCGTACAAATCGCCCGAGTACGCGCACCTCGGTCGCATAACCAAGAAGACGGACGTGTGGAGCTTCGGTATAGTGATACTGGAGATGTTGACGGGGAGGTTCCCAGAGAACTACCTGACCCGGAACCATGACACCAAATCGGACCTTGCTACTTGGGTCAACAACATGATCAAGGAAAAGAAGACGGCGCTGGTGTTCGATGCAGAGCTGGGGAGAGCCCGGGAGAGTAATAAAGGTGAGATGTTGAAGATGTTGAAGATTGGGTTGAGTTGCTGTGAGGAAGATTGGGAGAGAAGGTTGGATTTGAATGAGGTAGTTACCAAAATTGAAGAGTTGAATGATGACGAAGACTTGAGTGATGGAATTGGAGATATATAA 1929 48.57 MRAPAPTISAALFIFFHLFLLLSSCMVLSVHAAPSDAETLLQFKRSLTSATALHNWVPSVPPCENHKSNWAGVLCLHGHVRGLRLENMGLKGDVDVDPLVSLTRLRTLSFMNNTLVGPWPSVISKLWSLRSLYLSYNHFSGEIPDDAFTGMKFLKKVFLTNNEFNGQIPSSLASLSRLMELRLDGNKFKGHVPDLRMDTLKRLNVSNNVLEGPIPKSLSHMDPSCFSGNSMCGGPLPACEKSKLSSAGLLRIAIILLILGIILAMISSICIILNLRKQPALQLGKGNGKSPGIIEEENNKYVGKQAAGDVYRSTDSSVSTSSVAQTTSRRAGADQGKLLFVRDDRERFDLQDLLRASAEILGSGSFGSSYKATILCNAVVVKRYKQMNNVGREEFHEYMRRLGRLTHQNLLPLVAYYYRKEEKLLISDFVDNGSLASHLHGNHNDEETGLEWATRLKIIKGIARGLSYLYTSLPSIVAPHGHLKSSNVLLDDSFEPLLTDYGLLPVANIEHGQTLMMAYKSPEYAHLGRITKKTDVWSFGIVILEMLTGRFPENYLTRNHDTKSDLATWVNNMIKEKKTALVFDAELGRARESNKGEMLKMLKIGLSCCEEDWERRLDLNEVVTKIEELNDDEDLSDGIGDI 642
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 9634757 9637114 - MC08g1148 Mch8g1318 694939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g1318 642 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 96 192 - -
Mch8g1318 642 Pfam Protein tyrosine and serine/threonine kinase 359 625 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch8g1318 642 FunFam Pollen receptor-like kinase 1 430 638 - -
Mch8g1318 642 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 25 - -
Mch8g1318 642 SUPERFAMILY Protein kinase-like (PK-like) 359 629 IPR011009 -
Mch8g1318 642 ProSiteProfiles Protein kinase domain profile. 355 629 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g1318 642 Gene3D Phosphorylase Kinase; domain 1 317 429 - -
Mch8g1318 642 SUPERFAMILY L domain-like 60 221 - -
Mch8g1318 642 Pfam Leucine Rich Repeat 128 146 IPR001611 GO:0005515(InterPro)
Mch8g1318 642 Pfam Leucine Rich Repeat 200 221 IPR001611 GO:0005515(InterPro)
Mch8g1318 642 Gene3D Ribonuclease Inhibitor 32 253 IPR032675 -
Mch8g1318 642 FunFam pollen receptor-like kinase 1 324 429 - -
Mch8g1318 642 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 30 631 IPR046959 -
Mch8g1318 642 Pfam Leucine rich repeat N-terminal domain 34 75 IPR013210 -
Mch8g1318 642 Gene3D Transferase(Phosphotransferase) domain 1 430 638 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0639 Mch-Chr11:4132046 Mch8g1318 Mch-Chr8:9634757 1.90E-116 dispersed
Mch8g1318 Mch-Chr8:9634757 Mch8g3250 Mch-Chr8:34456642 7.30E-99 dispersed
Mch8g1318 Mch-Chr8:9634757 Mch6g0451 Mch-Chr6:3004373 2.04E-122 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77608 PF07714 PK_Tyr_Ser-Thr 1.60E-28 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g1318 K28077 - csv:101203276 961.444