Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch8g1324 | ATGGCAGATGGTCAAGAATCAGATAAGAACATCGAGATATGGAAAATCAAGAAACTTATCAAGGCATTGGAATCTGCACGAGGCAATGGTACCAGCATGATATCTCTTATAATGCCTCCCCGTGATCAAATATCACGAGTTACCAAGATGCTCGGTGATGAGTTTGGAACTGCTTCGAACATCAAAAGTAGGGTCAACCGCCAGTCAGTTTTGGGTGCCATTACTTCTGCTCAACAAAGGCTGAAGCTTTATAATAAAGTTCCTCCTAATGGATTAGTTCTTTATACAGGAACTATTGTTACCGAAGATGGCAAGGAAAAGAAGGTTACAATTGATTTTGAACCTTTCAAACCTATAAATGCATCACTGTACCTATGTGATAACAAGTTCCACACTGAAGCTCTCAATGAACTGTTAGAATCCGATCAAAAATTTGGTTTCATTGTTATGGATGGAAATGGCACACTTTTTGGGACATTAAGTGGAAACACGAGGGAGGTGCTTCATAAATTTTCAGTTGATTTACCAAAGAAGCATGGAAGGGGTGGGCAATCAGCTCTTCGATTTGCTCGTCTCAGGATGGAAAAGCGGCACAACTATGTAAGGAAGACTGCAGAACTTGCCACCCAGTTCTTCATTAATCCTGCTACCAGTCAGCCTAATGTTGCTGGGCTAATACTTGCTGGTTCAGCGGACTTCAAGACTGAGCTAAGCCAATCTGATATGTTTGATCCCCGTCTACAAGCAAAAATATTGAACGTGGTTGATGTTTCTTATGGGGGAGAAAATGGATTCAACCAGGCCATAGAGCTTTCATCAGAAATTCTATCAAATGTGAAGTTCATACAGGAGAAGCGACTGATTGGTAAATACTTTGAGGAAATCAGCCAGGATACTGGAAAATATGTCTTCGGGGTGGATGATACTTTGAAGGCTTTGGAAATGGGAGCTGTGGAAACCCTCATTGTGTGGGAAAATTTAGATATTAACCGATATGTACTGAAAAATGGTGTGACGGGTGATATTGTTGTTAAGCATTTGAACAAGGAACAAGATGCTGATCAGAGCAACTTCCGAGATGCGACCACCGCGGCTGAGTTGGAGGTTCAGGAGAAAATGCCCCTACTGGAGTGGTTTGCGAACGAGTACAAGAGATTCGGCTGCACGCTTGAATTTGTCACCAACAAATCCCAGGAGGGGTCTCAATTCTGCAGAGGGTTTGGTGGAATTGGAGGCATTCTTCGCTACCAGCTCGACATTAGATCATTTGATGAGCTATCTGACGATGGAAATGAATACGAGGATTCCGATTAG | 1314 | 42.47 | MADGQESDKNIEIWKIKKLIKALESARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFKPINASLYLCDNKFHTEALNELLESDQKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVAGLILAGSADFKTELSQSDMFDPRLQAKILNVVDVSYGGENGFNQAIELSSEILSNVKFIQEKRLIGKYFEEISQDTGKYVFGVDDTLKALEMGAVETLIVWENLDINRYVLKNGVTGDIVVKHLNKEQDADQSNFRDATTAAELEVQEKMPLLEWFANEYKRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDIRSFDELSDDGNEYEDSD | 437 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 9750051 | 9751730 | + | MC08g1152 | Mch8g1324 | 694945 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch8g1324 | 437 | PANTHER | PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1 | 3 | 429 | IPR004403 | GO:0002184(PANTHER)|GO:0003747(InterPro)|GO:0005829(PANTHER)|GO:0006415(InterPro)|GO:0016149(PANTHER)|GO:0018444(PANTHER)|GO:1990825(PANTHER) | |
Mch8g1324 | 437 | Pfam | eRF1 domain 2 | 144 | 277 | IPR005141 | - | |
Mch8g1324 | 437 | SUPERFAMILY | Translational machinery components | 142 | 276 | - | - | |
Mch8g1324 | 437 | FunFam | Peptide chain release factor subunit 1 | 279 | 437 | - | - | |
Mch8g1324 | 437 | NCBIfam | peptide chain release factor aRF-1 | 12 | 417 | IPR004403 | GO:0003747(InterPro)|GO:0006415(InterPro) | |
Mch8g1324 | 437 | Gene3D | eRF1 domain 2 | 136 | 277 | IPR042226 | - | |
Mch8g1324 | 437 | Gene3D | - | 279 | 437 | IPR029064 | - | |
Mch8g1324 | 437 | SUPERFAMILY | N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 | 6 | 140 | IPR024049 | - | |
Mch8g1324 | 437 | Gene3D | eRF1 domain 1 | 2 | 135 | IPR024049 | - | |
Mch8g1324 | 437 | SMART | eRF1_1_2 | 4 | 140 | IPR005140 | - | |
Mch8g1324 | 437 | SUPERFAMILY | L30e-like | 278 | 420 | IPR029064 | - | |
Mch8g1324 | 437 | Pfam | eRF1 domain 3 | 281 | 418 | IPR005142 | - | |
Mch8g1324 | 437 | Pfam | eRF1 domain 1 | 17 | 139 | IPR005140 | - | |
Mch8g1324 | 437 | FunFam | Eukaryotic peptide chain release factor subunit 1 | 136 | 277 | - | - | |
Mch8g1324 | 437 | FunFam | Eukaryotic peptide chain release factor subunit 1 | 2 | 135 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch7g0008 | Mch-Chr7:86940 | Mch8g1324 | Mch-Chr8:9750051 | 3.48E-301 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch8g1324 | K03265 | - | gmx:100786788 | 837.025 |