Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g1338 ATGGAGCAAGGATCTGGGTTTTCCACTCCTTCTCAGCTTTCACGGGTGTATCTCTCTAGGAATCTATTACTTGCATACCAAAGTTTTGGAGTAGTGTATGGAGATTTGAGCACTTCGCCCCTCTATGTTTACTCCAGCACATTTGCAGGGAAGTTACAGAAACATAGAACTGAGGACGTAGTATTTGGTGCATTCTCCTTGATATTCTGGACTTTTACACTGATTCCATTACTGAAGTATGTCTTCATTGTATTGAGCGCAGATGACAATGGTGAAGGAGGAACATTTGCTCTTTACTCTCTGCTTTGCCGACATGCTAAGTTGAGTTTACTTCCTAACCAACAAGCAGCTGATGAGGAACTCTCATCTTACAAATATGGCCCGTCTTCTCATGCAGTAGCCTCTTCTCAGCTAAAAAGGTTTTTGGAAAGGCATAAAACACTTAGGACGGTCTTACTTCTTGTCGTATTATTTGGTGCTTGCATGGTCATTGGTGATGGTGTGCTAACTCCTGCAATTTCAGTTCTGTCGTCAGTTTCAGGGTTACAAGTTACTGAAGCTAAATTGACCAGTGGGACACTCCTTTTGATTGCTTGTGCCATATTGATTGGCCTGTTTGCTCTGCAGCATTGTGGCACCCATAAGGTTGCCTTTATGTTTGCTCCACTAGTTATTATCTGGTTGTTATCAATTTTCTCCATTGGTATGTACAACATAATACATTGGAACCCAAGTATTATTCGTGCACTGTCCCCTCATTATGTTATCAAGTTTTTAAGCATCACTGGTAAAGATGGTTGGCTTTCTCTCGGAGGGATTCTTCTGTCCATAACTGGTACTGAAGCGATGTTTGCAGATCTTGGTCATTTCACTGCTTTGTCGATAAGGCTTGCATTTGCATTTGTTATCTACCCTTGTTTGGTAGTACAATACATGGGTCAAGCTGCTTTTCTGTCTAAGAACCTTGATTTGTTTCCAAACAGCTTTTATGACTCAATACCTAAACCTGTATTTTGGCCTGTTTTTATTATTGCCACCCTTGCAGCTATTGTAGGGAGCCAGGCTGTCATTACTGCTACTTTCTCCATTGTCAAACAATGCCATGCCCTTGGTTGCTTTCCAAGAGTGAAAGTTGTCCACACCTCTAAACACATATATGGCCAGATCTACATCCCAGAAATAAACTGGATATTAATGGTCCTCACTCTTTCCATTACAATAGGGTTTCGAGATACGACAATGATTGGAAATGCTTATGGACTTGCCTGCATGACGGTTATGTTCACGACGACATTTCTTATGGCACTTGTCATAGTATTCGTTTGGCAAAAAAGTATCCTGCTGGCTGCACCTTTTCTCATCTTCTTCTGGTCCATTGAGGGTGCCTACTTATCAGCAGCAATCATAAAAGTGCCTCAAGGAGGCTGGGTCCCTCTGGTGTTGTCAGCCATTTTTATGATCGTTATGTTTGTATGGCATTATGGCACTCGCAAGAAGTACAACTTTGATCTACACAATAAAGTTTCACTGAAGTGGTTGCTTGGCCTTGGCCCTAGCCTCGGTATAGTTCGTGTGCCGGGTATAGGTCTCATATACTCGGAATTGGCAACTGGGGTTCCCTCAATATTTTCTCACTTTGTGACCAATCTCCCTGCGTTTCACAAAGTTTTAGTCTTTGTTTGTGTGAAGTCTGTTCCTGTTCCATATGTCTCGCCCGAAGAACGTTTTCTCGTCGGGAGAGTTTGTCCTAGACCTTATCGCATGTATCGGTGCATAGTAAGGTATGGCTACAAGGACATTCAGAGGGATGATGGGGACTTTGAGAACCAGCTGATGCTAAACATAGCAGAATTTATTCAAATGGAGGCAGAGGAACCACAATTCTCGAACTCTGAAAGTTCTTCAATTGATGGGAGGATGGCTGTAATAAGCACTCGAAGCATTCAATCAAGCTTGAGCTTAATAGTATCGGGGCAGGAAGAAGTTGGTACAAGCAACTCCATCCATAGCAGCAAATCTTCAACGCTCCAGAGTTTACGATCTGTGTATGAGGATGAGAATCCGCAACTAAGAAGGCGCCAAGTAAGGTTTCAGCTGTCTCCCAGCCCTTCAATGGCTCCTCGAGTTAGGGAAGAATTGATGGACTTGATCCAAGCAAAAGAGGCAGGTGTTGCATATATAATGGGACACTCATATGTGAAGGCAAGAAGATCTTCGTCGTACTTGAAAAAGCTCGTAATCGATATCGGCTACTCATTTCTGCGAAAGAACTGCAGAGGCCCGTCTGTTGCACTCAACATTCCTCACATCAGTCTAATTGAAGTGGGGATGATATACTATGTTTAG 2346 42.8 MEQGSGFSTPSQLSRVYLSRNLLLAYQSFGVVYGDLSTSPLYVYSSTFAGKLQKHRTEDVVFGAFSLIFWTFTLIPLLKYVFIVLSADDNGEGGTFALYSLLCRHAKLSLLPNQQAADEELSSYKYGPSSHAVASSQLKRFLERHKTLRTVLLLVVLFGACMVIGDGVLTPAISVLSSVSGLQVTEAKLTSGTLLLIACAILIGLFALQHCGTHKVAFMFAPLVIIWLLSIFSIGMYNIIHWNPSIIRALSPHYVIKFLSITGKDGWLSLGGILLSITGTEAMFADLGHFTALSIRLAFAFVIYPCLVVQYMGQAAFLSKNLDLFPNSFYDSIPKPVFWPVFIIATLAAIVGSQAVITATFSIVKQCHALGCFPRVKVVHTSKHIYGQIYIPEINWILMVLTLSITIGFRDTTMIGNAYGLACMTVMFTTTFLMALVIVFVWQKSILLAAPFLIFFWSIEGAYLSAAIIKVPQGGWVPLVLSAIFMIVMFVWHYGTRKKYNFDLHNKVSLKWLLGLGPSLGIVRVPGIGLIYSELATGVPSIFSHFVTNLPAFHKVLVFVCVKSVPVPYVSPEERFLVGRVCPRPYRMYRCIVRYGYKDIQRDDGDFENQLMLNIAEFIQMEAEEPQFSNSESSSIDGRMAVISTRSIQSSLSLIVSGQEEVGTSNSIHSSKSSTLQSLRSVYEDENPQLRRRQVRFQLSPSPSMAPRVREELMDLIQAKEAGVAYIMGHSYVKARRSSSYLKKLVIDIGYSFLRKNCRGPSVALNIPHISLIEVGMIYYV 781
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 9828015 9835743 - MC08g1163 Mch8g1338 694959
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g1338 781 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 19 781 IPR003855 GO:0006813(PANTHER)|GO:0015079(PANTHER)|GO:0015079(InterPro)|GO:0016020(PANTHER)|GO:0016020(InterPro)|GO:0071805(InterPro)
Mch8g1338 781 Pfam K+ potassium transporter integral membrane domain 24 513 IPR053951 -
Mch8g1338 781 NCBIfam potassium uptake protein 24 781 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Mch8g1338 781 Pfam K+ potassium transporter C-terminal domain 526 779 IPR053952 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch3g0086 Mch-Chr3:999555 Mch8g1338 Mch-Chr8:9828015 3.79E-294 dispersed
Mch3g1291 Mch-Chr3:15840278 Mch8g1338 Mch-Chr8:9828015 2.03E-262 dispersed
Mch3g1292 Mch-Chr3:15849077 Mch8g1338 Mch-Chr8:9828015 6.50E-258 dispersed
Mch8g1338 Mch-Chr8:9828015 Mch8g1541 Mch-Chr8:12004197 2.32E-301 dispersed
Mch8g1338 Mch-Chr8:9828015 Mch4g2231 Mch-Chr4:23901843 0.00E+00 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g1338 K03549 - csv:101208973 1432.54