Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g1386 GAAGAAGTATCAATCGATAATCCGATCATGGGGGAGAACAAACCGGCGGAAATCAAAGATTTCCAAATAGCGATTGCGGAGAAAGAAGAGGGCAAAAAGCAGTTGCCCCCAAAGCGAAGCTCCAACAAGGACCGCCACACCAAAGTGGAGGGCCGCGGCCGGAGAATTCGGATGCCGGCTCTGTGCGCCGCCAGAATCTTCCAATTGACCAGAGAATTGGGTCATAAATCCGACGGAGAAACCATCCAGTGGCTGCTGCAGCAGGCGGAGCCCTCGATCATCGCCGCCACTGGCACCGGCACGATTCCTGCCTCTGCCCTCGCCGCCGCCGCCGCCGGGGTGTCCGTTTCCCAGCAGGCGGCGTCTCTCTCCGCCGGATTGCATCAGAAATTGGAGGAATTAGGAGGGGGCGGGTCCAGTAGGGCCAATTGGGGGAATTTTGGGAGACCCCATTTGGCGACCACTCCCCCAGGGGTTTGGCCCTCCTCTGTTTCTGCCGCCTTTGGCTTTCACTCATCATCAACATCATCCTCTTCTTCCCCTCCATCAACCACAAATTTAGCCACTGAAACTTCTAATTACTTTCACAAACTTGGGTTCCCCCCCTTTGACTTGCCCCCCACCAATATGGGTCCTATGAGTTTCACCTCCATTTTAGGAGCCAACACCCACCAACAGCTCCCTGGTTTGGAGCTGGGTTTGTCCCAAGATGGCCATATTGGGGTCCTAAATCCTCAGATATTGAACCAAGTTTACCACCAAATGGGTCAGCCCAGAGTTCCTCACCATCACCATCACCAACAACAACCTTCTGCTAAGGATGATTCTCAGGACTCAGGG 840 54.52 EEVSIDNPIMGENKPAEIKDFQIAIAEKEEGKKQLPPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASALAAAAAGVSVSQQAASLSAGLHQKLEELGGGGSSRANWGNFGRPHLATTPPGVWPSSVSAAFGFHSSSTSSSSSPPSTTNLATETSNYFHKLGFPPFDLPPTNMGPMSFTSILGANTHQQLPGLELGLSQDGHIGVLNPQILNQVYHQMGQPRVPHHHHHQQQPSAKDDSQDSG 280
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 10294117 10294956 - MC08g1198 Mch8g1386 695007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g1386 280 MobiDBLite consensus disorder prediction 257 280 - -
Mch8g1386 280 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 35 271 IPR005333 GO:0003700(InterPro)|GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0043565(PANTHER)
Mch8g1386 280 Pfam TCP family transcription factor 41 120 IPR017887 -
Mch8g1386 280 ProSiteProfiles TCP domain profile. 42 96 IPR017887 -
Mch8g1386 280 MobiDBLite consensus disorder prediction 28 53 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch1g0831 Mch-Chr1:11806107 Mch8g1386 Mch-Chr8:10294117 1.75E-32 dispersed
Mch7g0736 Mch-Chr7:11961125 Mch8g1386 Mch-Chr8:10294117 4.30E-35 dispersed
Mch8g1386 Mch-Chr8:10294117 Mch9g2143 Mch-Chr9:22181244 1.44E-36 dispersed
Mch10g1328 Mch-Chr10:11505887 Mch8g1386 Mch-Chr8:10294117 2.02E-11 transposed
Mch7g0051 Mch-Chr7:506676 Mch8g1386 Mch-Chr8:10294117 1.20E-54 wgd
Mch8g1386 Mch-Chr8:10294117 Mch9g2397 Mch-Chr9:23740892 9.86E-32 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
43867 PF03634 TCP 1.20E-30 No_clan Mch TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g1386 - - - 0.0