Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g1464 ATGGGTTCTGGTAATGGGTTTTACTCGACTTGCGAATTCAATTTGGATGCCAAATGGCTGATCGATCCCAAGCATCTTTTTGTTGGCCCGAAGATTGGGGAAGGTGCTCATGCCAAGGTGTATGAGGGAAAGTACAAAAACCAGATTGTGGCTATCAAAATGGTGGGTAGAGGAGATACCCCTGAGAGGATGGCCAAGAGAGAAGCTCGGTTTGCCAGAGAGGTAGCAATGTTGTCCAGAGTGCAACACAAGAACTTAGTGAAGTTTATTGGCGCTTGCAAGGAACCTATGATGGTTATAGTGACTGAATTACTCACAGGTGGCACATTGCGCAAATACCTCTTGAATTTGAGGCCAAGTAGCCTGGAACTTCACGTGGCGATCGGGTTTGCGCTCGATATTGCTCGTGCAATGGAGTGTTTACACTCCCATGGAATAATTCACCGTGACCTTAAACCAGAGAACTTGATATTGACTGCAGACCATAAAACTGTTAAGCTTGCTGACTTTGGTTTGGCAAGAGAAGAGTCAGTAACAGAGATGATGACTGCAGAAACAGGAACATATAGGTGGATGGCTCCAGAGCTCTATAGCACAGTAACTCTAAAACATGGAGATAAAAAGCATTATAATCATAAGGTTGATGCCTACAGCTTCGCCATTGTATTGTGGGAACTCATCCTTAATAGGTTGCCTTTCGAAGGCATGTCGAATTTACAGGCAGCCTACGCAGCTGCTTTTAAGAACATGAGGCCAAGTGCTGAAAATCTTCCAGAGGATTTAGCTTTAATAGTGACATCATGCTGGAGAGAAGATCCAAATACAAGGCCAAACTTCAGCCAGATCATACAGATGCTCCTACAGTCTCTCTCCCGAATATCGCCACGAGCACCCGTTATCCCAACTCGGATATGTGCTTCAGAAAACGTTGTGATGCCACCAGAATCGCCTGGTACAAACTCCTTGATGGCTGTCAGGCATGGCTCGGAGGAACCCTCGCACAGCATGATCGAAGAAACCCCGAGAAGCTCCTTCTTCTGCTTTAACAAGTGTTACTGA 1059 45.7 MGSGNGFYSTCEFNLDAKWLIDPKHLFVGPKIGEGAHAKVYEGKYKNQIVAIKMVGRGDTPERMAKREARFAREVAMLSRVQHKNLVKFIGACKEPMMVIVTELLTGGTLRKYLLNLRPSSLELHVAIGFALDIARAMECLHSHGIIHRDLKPENLILTADHKTVKLADFGLAREESVTEMMTAETGTYRWMAPELYSTVTLKHGDKKHYNHKVDAYSFAIVLWELILNRLPFEGMSNLQAAYAAAFKNMRPSAENLPEDLALIVTSCWREDPNTRPNFSQIIQMLLQSLSRISPRAPVIPTRICASENVVMPPESPGTNSLMAVRHGSEEPSHSMIEETPRSSFFCFNKCY 352
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 10974363 10978747 - MC08g1264 Mch8g1464 695085
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g1464 352 CDD STKc_MAP3K-like 32 286 - -
Mch8g1464 352 ProSitePatterns Protein kinases ATP-binding region signature. 32 53 IPR017441 GO:0005524(InterPro)
Mch8g1464 352 Gene3D Phosphorylase Kinase; domain 1 14 105 - -
Mch8g1464 352 Gene3D Transferase(Phosphotransferase) domain 1 106 298 - -
Mch8g1464 352 Pfam Protein tyrosine and serine/threonine kinase 30 286 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch8g1464 352 SMART serkin_6 26 290 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g1464 352 ProSiteProfiles Protein kinase domain profile. 26 290 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g1464 352 ProSitePatterns Serine/Threonine protein kinases active-site signature. 146 158 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch8g1464 352 SUPERFAMILY Protein kinase-like (PK-like) 17 310 IPR011009 -
Mch8g1464 352 PANTHER SERINE-THREONINE PROTEIN KINASE 20 290 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Mch8g1464 352 PRINTS Tyrosine kinase catalytic domain signature 140 158 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch8g1464 352 PRINTS Tyrosine kinase catalytic domain signature 102 115 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch8g1464 352 PRINTS Tyrosine kinase catalytic domain signature 214 236 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch8g1464 352 PRINTS Tyrosine kinase catalytic domain signature 257 279 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch8g1464 352 FunFam Kinase suppressor of Ras 1 15 105 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch8g1464 Mch-Chr8:10974363 Mch8g2582 Mch-Chr8:28960626 3.17E-71 dispersed
Mch1g1485 Mch-Chr1:16374469 Mch8g1464 Mch-Chr8:10974363 3.22E-98 transposed
Mch5g1998 Mch-Chr5:19693486 Mch8g1464 Mch-Chr8:10974363 3.73E-142 transposed
Mch4g2191 Mch-Chr4:23652879 Mch8g1464 Mch-Chr8:10974363 6.17E-193 wgd
Mch6g0114 Mch-Chr6:665767 Mch8g1464 Mch-Chr8:10974363 2.20E-153 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77609 PF07714 PK_Tyr_Ser-Thr 4.90E-57 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g1464 - - - 0.0