Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch8g1464 | ATGGGTTCTGGTAATGGGTTTTACTCGACTTGCGAATTCAATTTGGATGCCAAATGGCTGATCGATCCCAAGCATCTTTTTGTTGGCCCGAAGATTGGGGAAGGTGCTCATGCCAAGGTGTATGAGGGAAAGTACAAAAACCAGATTGTGGCTATCAAAATGGTGGGTAGAGGAGATACCCCTGAGAGGATGGCCAAGAGAGAAGCTCGGTTTGCCAGAGAGGTAGCAATGTTGTCCAGAGTGCAACACAAGAACTTAGTGAAGTTTATTGGCGCTTGCAAGGAACCTATGATGGTTATAGTGACTGAATTACTCACAGGTGGCACATTGCGCAAATACCTCTTGAATTTGAGGCCAAGTAGCCTGGAACTTCACGTGGCGATCGGGTTTGCGCTCGATATTGCTCGTGCAATGGAGTGTTTACACTCCCATGGAATAATTCACCGTGACCTTAAACCAGAGAACTTGATATTGACTGCAGACCATAAAACTGTTAAGCTTGCTGACTTTGGTTTGGCAAGAGAAGAGTCAGTAACAGAGATGATGACTGCAGAAACAGGAACATATAGGTGGATGGCTCCAGAGCTCTATAGCACAGTAACTCTAAAACATGGAGATAAAAAGCATTATAATCATAAGGTTGATGCCTACAGCTTCGCCATTGTATTGTGGGAACTCATCCTTAATAGGTTGCCTTTCGAAGGCATGTCGAATTTACAGGCAGCCTACGCAGCTGCTTTTAAGAACATGAGGCCAAGTGCTGAAAATCTTCCAGAGGATTTAGCTTTAATAGTGACATCATGCTGGAGAGAAGATCCAAATACAAGGCCAAACTTCAGCCAGATCATACAGATGCTCCTACAGTCTCTCTCCCGAATATCGCCACGAGCACCCGTTATCCCAACTCGGATATGTGCTTCAGAAAACGTTGTGATGCCACCAGAATCGCCTGGTACAAACTCCTTGATGGCTGTCAGGCATGGCTCGGAGGAACCCTCGCACAGCATGATCGAAGAAACCCCGAGAAGCTCCTTCTTCTGCTTTAACAAGTGTTACTGA | 1059 | 45.7 | MGSGNGFYSTCEFNLDAKWLIDPKHLFVGPKIGEGAHAKVYEGKYKNQIVAIKMVGRGDTPERMAKREARFAREVAMLSRVQHKNLVKFIGACKEPMMVIVTELLTGGTLRKYLLNLRPSSLELHVAIGFALDIARAMECLHSHGIIHRDLKPENLILTADHKTVKLADFGLAREESVTEMMTAETGTYRWMAPELYSTVTLKHGDKKHYNHKVDAYSFAIVLWELILNRLPFEGMSNLQAAYAAAFKNMRPSAENLPEDLALIVTSCWREDPNTRPNFSQIIQMLLQSLSRISPRAPVIPTRICASENVVMPPESPGTNSLMAVRHGSEEPSHSMIEETPRSSFFCFNKCY | 352 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 10974363 | 10978747 | - | MC08g1264 | Mch8g1464 | 695085 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch8g1464 | 352 | CDD | STKc_MAP3K-like | 32 | 286 | - | - | |
Mch8g1464 | 352 | ProSitePatterns | Protein kinases ATP-binding region signature. | 32 | 53 | IPR017441 | GO:0005524(InterPro) | |
Mch8g1464 | 352 | Gene3D | Phosphorylase Kinase; domain 1 | 14 | 105 | - | - | |
Mch8g1464 | 352 | Gene3D | Transferase(Phosphotransferase) domain 1 | 106 | 298 | - | - | |
Mch8g1464 | 352 | Pfam | Protein tyrosine and serine/threonine kinase | 30 | 286 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Mch8g1464 | 352 | SMART | serkin_6 | 26 | 290 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch8g1464 | 352 | ProSiteProfiles | Protein kinase domain profile. | 26 | 290 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch8g1464 | 352 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 146 | 158 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Mch8g1464 | 352 | SUPERFAMILY | Protein kinase-like (PK-like) | 17 | 310 | IPR011009 | - | |
Mch8g1464 | 352 | PANTHER | SERINE-THREONINE PROTEIN KINASE | 20 | 290 | IPR050167 | GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER) | |
Mch8g1464 | 352 | PRINTS | Tyrosine kinase catalytic domain signature | 140 | 158 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Mch8g1464 | 352 | PRINTS | Tyrosine kinase catalytic domain signature | 102 | 115 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Mch8g1464 | 352 | PRINTS | Tyrosine kinase catalytic domain signature | 214 | 236 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Mch8g1464 | 352 | PRINTS | Tyrosine kinase catalytic domain signature | 257 | 279 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Mch8g1464 | 352 | FunFam | Kinase suppressor of Ras 1 | 15 | 105 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch8g1464 | Mch-Chr8:10974363 | Mch8g2582 | Mch-Chr8:28960626 | 3.17E-71 | dispersed | |
Mch1g1485 | Mch-Chr1:16374469 | Mch8g1464 | Mch-Chr8:10974363 | 3.22E-98 | transposed | |
Mch5g1998 | Mch-Chr5:19693486 | Mch8g1464 | Mch-Chr8:10974363 | 3.73E-142 | transposed | |
Mch4g2191 | Mch-Chr4:23652879 | Mch8g1464 | Mch-Chr8:10974363 | 6.17E-193 | wgd | |
Mch6g0114 | Mch-Chr6:665767 | Mch8g1464 | Mch-Chr8:10974363 | 2.20E-153 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
77609 | PF07714 | PK_Tyr_Ser-Thr | 4.90E-57 | CL0016 | Mch | PK |
Pathway information
