Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g1468 ATGGAATCACTTGTTGATGGTATGAGTTCTTTGTTGAAAACTCAGAACCTGACGTCTACATCGAGGATTCCCGATTTGTCTCGCCACCCTTCTCCTAAACAATCTAGGGATGAAGCAACTTCTTCGACATCCTACAGTGCTGCTTCTCAAAGTTGTGCCAAGAAACCCGTTCGTCATCCAAATGGTTCTTCTGTAGGTAATAAAAAGCATTCTTACAATTTGAACCATGATGTGCAGCTTGAAGGTTTAACTGATGTGAAAAAACATACATACATTTCCAATAAGGGGAAATCCGAGCTTTTAAACCCGACGGATATTGTATATAAATCAACTGAAAGTTCTTTTCAGAAGAAGGTTCCTTTCGAGGGAGGTGGAGAAAAACCTCTCGTGAAGCATATTGTTGATGATTCTAAGGATTGTTGTTCGAGTGGCTCGGTAGAATCTGGGAATCAAGTATTGAACACATCGAAAGGAGCTGCCACACAAATAAATGATAAACAAAAGTCTCAGCCAGCTGAAACATCTTGTCCAAGTCCTCAGAACAGCTTATATTCCACGACTTTATATGCAGAGGCCAAACAAAGTTTCTCGAACACGGAAGTCAGTGAATGTGCAAGCAGCATCGAAAAGTCTTGCGAAAGTGTCGACATCTCAAATTCCTATGATCTTGATAAGAGCAGGAAAACGAGTGTTTACCGAGGTAGCACGGGCAGTGATATCAGTGATGAGAGCAACTCTAGTAGTTTAAGCAATACCATGTACAAGCCCCATAAGGCAAATGATACAAGATGGGAAGCAATGCAAGTTGTGAGATCTCACGATGGGATGTTAGGTCTGAATCATTTCAGGTTGCTGCGGAGACTCGGATGTGGCGATATTGGTAGTGTCTATCTCTCAGAGTTAACTGGTACCAAAACTTACTTTGCTATGAAGGTTATGGATAAGGCTGCTTTGGCTAGTAGGAAGAAGCTTCTGAGGGCTCAGACCGAGCGCGAGATATTGCAATCCCTGGATCATCCATTCCTGCCAACTTTGTATACACACTTCGAGACAGAAAAGTTCTCTTGTTTGGTTATGGAGTTTTGCCCCGGGGGCGACTTGCATGCGCTTAGGCAAAGACAACCCGGAAAATACTTTCCAGAGCATGCTGCAAGATTCTATGTGGCTGAAGTTCTCCTTGCTTTGGAGTATCTGCACATGCTTGGGATAATCTACAGGGACCTAAAACCTGAAAATGTGTTAGTGAGAGATGATGGGCACATAATGCTATCTGATTTTGACCTCTCTCTTCGATGCGCCGTCTCCCCGACTCTTGTCAAATCATCGAACTCGGGTTTAGAAGCTAAAAGCTCAGGGTACTGTGTTCAGCCTGCTTGCATTGAGCCAACTTGCATAATGCAGCCAGATTGTATCCAGCCAGCATGTTTTACGCCCCGCTTCTTAAGTAGGCACAGGAAAGAAAAAAAGTCCAAACCAAAGAGTGAAGTATATCATCAAGTGAGCCCTCTACCGGAGCTCATTGCCGAACCCACAAGCGCGAGATCGATGTCCTTTGTTGGTACACACGAGTACCTGGCACCTGAAATCATAAAAGGTGAAGGCCATGGCAGTGCCGTGGACTGGTGGACTTTCGGGATCTTTCTCTACGAGCTTTTGTTTGGTAGAACTCCATTCAAGGGGGCTGGAAACCGTGCTACTTTGTTTAACGTGGTTGGTCAGCCATTGAGATTTCCAGAGTCTCCTTCTGTGAGCTTTGCAGCAAGGGACTTAATCAGAGGTTTGCTTGTGAAAGAACCACAGCATCGTCTCGCTTACAGGCGTGGAGCTACCGAAATCAAGCAACATCCATTCTTCCAGAGCGTGAACTGGGCGCTTATCCGCTGCGCCAACCCCCCGGAGGTGCCAAGAGTAGATGTCATTGACTTCTCTTCAAGAATGGAGACACCACATGCACCGGCAGGCGAAAAGATGCCCGGAGTTGATGTGAAGCCTTCAGACAGTCTGTTCAGGAAAAGATTATGCTACTTTCTCGTTGACAGCCAGGAGACAGTCTGTTTGGGAAAAAGTTCCATTCCTTTAGAGAAAGAAAGAGAGAAAAAGAATTGA 2106 45.06 MESLVDGMSSLLKTQNLTSTSRIPDLSRHPSPKQSRDEATSSTSYSAASQSCAKKPVRHPNGSSVGNKKHSYNLNHDVQLEGLTDVKKHTYISNKGKSELLNPTDIVYKSTESSFQKKVPFEGGGEKPLVKHIVDDSKDCCSSGSVESGNQVLNTSKGAATQINDKQKSQPAETSCPSPQNSLYSTTLYAEAKQSFSNTEVSECASSIEKSCESVDISNSYDLDKSRKTSVYRGSTGSDISDESNSSSLSNTMYKPHKANDTRWEAMQVVRSHDGMLGLNHFRLLRRLGCGDIGSVYLSELTGTKTYFAMKVMDKAALASRKKLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHALRQRQPGKYFPEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLVKSSNSGLEAKSSGYCVQPACIEPTCIMQPDCIQPACFTPRFLSRHRKEKKSKPKSEVYHQVSPLPELIAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGRTPFKGAGNRATLFNVVGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEIKQHPFFQSVNWALIRCANPPEVPRVDVIDFSSRMETPHAPAGEKMPGVDVKPSDSLFRKRLCYFLVDSQETVCLGKSSIPLEKEREKKN 701
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 10997803 11001952 - MC08g1268 Mch8g1468 695089
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g1468 701 MobiDBLite consensus disorder prediction 228 254 - -
Mch8g1468 701 MobiDBLite consensus disorder prediction 8 28 - -
Mch8g1468 701 Gene3D Transferase(Phosphotransferase) domain 1 513 636 - -
Mch8g1468 701 FunFam Serine/threonine-protein kinase D6PK-like 280 365 - -
Mch8g1468 701 Gene3D Transferase(Phosphotransferase) domain 1 366 433 - -
Mch8g1468 701 MobiDBLite consensus disorder prediction 36 51 - -
Mch8g1468 701 MobiDBLite consensus disorder prediction 161 180 - -
Mch8g1468 701 ProSitePatterns Serine/Threonine protein kinases active-site signature. 403 415 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch8g1468 701 FunFam serine/threonine-protein kinase D6PK-like 366 433 - -
Mch8g1468 701 SUPERFAMILY Protein kinase-like (PK-like) 255 645 IPR011009 -
Mch8g1468 701 CDD STKc_phototropin_like 281 641 - -
Mch8g1468 701 ProSiteProfiles Protein kinase domain profile. 282 618 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g1468 701 Gene3D Phosphorylase Kinase; domain 1 280 365 - -
Mch8g1468 701 PANTHER FLIPPASE KINASE 1-RELATED 156 638 - GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Mch8g1468 701 Pfam Protein kinase domain 283 432 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g1468 701 Pfam Protein kinase domain 515 618 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g1468 701 MobiDBLite consensus disorder prediction 1 73 - -
Mch8g1468 701 SMART serkin_6 282 618 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g1468 701 MobiDBLite consensus disorder prediction 230 254 - -
Mch8g1468 701 FunFam serine/threonine-protein kinase D6PK-like 513 636 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch1g0308 Mch-Chr1:6554127 Mch8g1468 Mch-Chr8:10997803 1.47E-181 dispersed
Mch1g1680 Mch-Chr1:17579827 Mch8g1468 Mch-Chr8:10997803 2.13E-224 dispersed
Mch2g0443 Mch-Chr2:3222422 Mch8g1468 Mch-Chr8:10997803 6.76E-109 dispersed
Mch4g0368 Mch-Chr4:2323977 Mch8g1468 Mch-Chr8:10997803 2.31E-99 dispersed
Mch5g0012 Mch-Chr5:79991 Mch8g1468 Mch-Chr8:10997803 2.31E-215 dispersed
Mch8g1468 Mch-Chr8:10997803 Mch8g3098 Mch-Chr8:33399904 4.63E-129 dispersed
Mch8g1468 Mch-Chr8:10997803 Mch3g0725 Mch-Chr3:11538666 6.41E-233 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77610 PF00069 Pkinase 9.90E-36 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g1468 K08286 - csv:101219962 1207.59