Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g1481 ATGGCGGGTCTTGAGGAACTAAAGAAGAAGCTTACTCCCTTGTTTGACGCTGAAAAGGGGCTTTCTATGGATTCCACTGTGGACCCTTCTGATTCCTATACGTTTTCAGATACTGGGACTGTGAATCTGCTGAGCCGATCGTATGGGGTTTACAATATTAATGAGCTAGGGTTACAAAAATGCACATCTAGTGAGAGGACGTATCGATGTGCTTCCCATGAAATGAGAATATTTGGAGCCATTGGTAGTGGTGCTAGCAGTGTTGTTCAGAGAGCTATCCACATTCCTGCTCATCGAATCATGGCATTGAAGAAGATCAATATCTTTGAAAAGGAGAAAAGACAGCAGCTTCTTACCGAGATAAGGACATTATGTGAAGCCCCATGTTCGGAGGGTCTGGTGGAATTTCATGGTGCGTTTTATACCCCTGACTCTGGCCAAATAAGCATAGCTTTGGAGTACATGGATGGAGGGTCGTTAGCAGATGTCCTGCGTTTGAAGAAATGTATACCTGAGCCTGTCCTTTCGTCTATGTTTCAAAAACTTCTTCATGGACTAAATTACCTACATGGAGTAAGACATTTGGTTCACAGAGATATAAAGCCAGCTAATTTACTCGTAAATCTAAAGGGTGAAGCAAAAATTACAGATTTTGGCATAAGTGCTGGCTTAGAGAATTCAATGGCAATGTGTGCTACTTTTGTTGGAACTGTCACATACATGTCACCCGAGCGAATTCGAAATGAGAACTATTCTTATCCAGCTGATATTTGGAGCCTTGGGCTTGCACTCTTTGAGTGTGGTACTGGTGAATTTCCATATTCAGCTACTGAAGGCCTAGTGAATCTTATGTTGCAGATTTTGGATGACCCATCTCCGTCGCCATCAAAACAGAAATTTTCACCAGAGTTTTGTTCATTCGTCGATGCCTGCTTGCAGAAAGATGCAGATGCTAGGCCAACGGCAGAGCAGCTGCTTTCACACCCATTTATCAAGAAATATGAGGATGAACAAGTAGACTTGGCAGCATTTGTACAGAGTGTGTTTGATCCAATACAGAGGATGAAGGACTTGGCAGATATGTTGACAATTCATTATTACTTGCTTTTTGATGGACCTGATGAATTCTGGCACCATTCAAAAGCTTTGTACAATGAAAGCTCAACTTTGAGTTTTTCAGGGAAGCAATTTTCTGGTCCAAATGACATCTTTTCCACTCTATCAGACATTCGAAATACGTTAGCCGGGGACTGGCCTCTCGAAAAACTAGTTCATGTCGTTGAAAAACTCCAATGTCGAGCTCACGGTCGAGATGGAATCGCCATAAGGGTGTCAGGATCCTTCATCATCGGTAACCAGTTCCTCATATGTGGAGACGGAGTACAAGTCGAGGGACTGCCAAATTTCAAGGATCTCTCCATCGACGTTTCGAGTAAAAGAATGGGATCCTTCCGGGAGCAGTTCATCATCGAACCGAGCAACCTCATCGGTCGATACTACATAGCCAAACAAGAGCTTTATATAATTCAATAA 1533 42.79 MAGLEELKKKLTPLFDAEKGLSMDSTVDPSDSYTFSDTGTVNLLSRSYGVYNINELGLQKCTSSERTYRCASHEMRIFGAIGSGASSVVQRAIHIPAHRIMALKKINIFEKEKRQQLLTEIRTLCEAPCSEGLVEFHGAFYTPDSGQISIALEYMDGGSLADVLRLKKCIPEPVLSSMFQKLLHGLNYLHGVRHLVHRDIKPANLLVNLKGEAKITDFGISAGLENSMAMCATFVGTVTYMSPERIRNENYSYPADIWSLGLALFECGTGEFPYSATEGLVNLMLQILDDPSPSPSKQKFSPEFCSFVDACLQKDADARPTAEQLLSHPFIKKYEDEQVDLAAFVQSVFDPIQRMKDLADMLTIHYYLLFDGPDEFWHHSKALYNESSTLSFSGKQFSGPNDIFSTLSDIRNTLAGDWPLEKLVHVVEKLQCRAHGRDGIAIRVSGSFIIGNQFLICGDGVQVEGLPNFKDLSIDVSSKRMGSFREQFIIEPSNLIGRYYIAKQELYIIQ 510
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 11163807 11172651 - MC08g1276 Mch8g1481 695102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g1481 510 SMART serkin_6 75 331 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g1481 510 FunFam Mitogen-activated protein kinase kinase 3 355 509 - -
Mch8g1481 510 ProSitePatterns Serine/Threonine protein kinases active-site signature. 195 207 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch8g1481 510 ProSitePatterns Protein kinases ATP-binding region signature. 81 104 IPR017441 GO:0005524(InterPro)
Mch8g1481 510 Gene3D Phosphorylase Kinase; domain 1 54 156 - -
Mch8g1481 510 ProSiteProfiles Nuclear transport factor 2 domain profile. 358 508 IPR018222 -
Mch8g1481 510 FunFam mitogen-activated protein kinase kinase 3 157 353 - -
Mch8g1481 510 SUPERFAMILY NTF2-like 356 508 IPR032710 -
Mch8g1481 510 FunFam mitogen-activated protein kinase kinase 3 49 156 - -
Mch8g1481 510 SUPERFAMILY Protein kinase-like (PK-like) 77 369 IPR011009 -
Mch8g1481 510 Pfam Protein kinase domain 79 331 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g1481 510 Gene3D - 358 508 - -
Mch8g1481 510 CDD PKc_MAPKK_plant_like 76 335 - -
Mch8g1481 510 PANTHER DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED 55 364 - GO:0000165(PANTHER)|GO:0004708(PANTHER)
Mch8g1481 510 Gene3D Transferase(Phosphotransferase) domain 1 157 357 - -
Mch8g1481 510 ProSiteProfiles Protein kinase domain profile. 75 331 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch8g1018 Mch-Chr8:7204547 Mch8g1481 Mch-Chr8:11163807 1.36E-43 dispersed
Mch8g1481 Mch-Chr8:11163807 Mch8g3186 Mch-Chr8:34037596 1.98E-78 dispersed
Mch8g1481 Mch-Chr8:11163807 Mch8g3227 Mch-Chr8:34329790 9.30E-76 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77611 PF00069 Pkinase 6.30E-60 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g1481 K20607 - csv:101217978 958.362