Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch8g1482 | ATGGCTTCTTCCACCTACTCCAATTCTCCCTGCGCAGCCTGCAAGTTCCTCCGGCGAAAATGCCTACCGGACTGCGTTTTTGCCCCGTACTTCCCGCCCGAGGAGCCGCAGAAGTTTGCCAACGTCCACAAGATCTTCGGCGCCAGCAATGTCAGCAAGCTGCTGAACGAAGTCCAGCCACACCAACGCGAGGACGCCGTGAACTCGCTCGCCTACGAGGCCGAGGCAAGGATGAAAGACCCCGTCTACGGCTGCGTAGGCGCCATCTCCATCCTCCAGAGGCAAGTCATCAAGCTCCAGAAAGAACTCGACGCCACCAATGCGAATCTCATCCGCTATGCCTGCAATGAAATCCCTGCTCCGTCCCCGTCCCCGTCGTCGTCCTCACAATACGCTCGGAGGTCGTCGTCTACGAACCATGAGGGAAGCTCCTCCACCTCTAGCTATGGCCACTACTATTCTGGTCTCTACTTTTCTCCATGGAGTAACAACAATGGCCCTTGTGGAGATGGCCATGACAAAGGAGGA | 528 | 57.01 | MASSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNANLIRYACNEIPAPSPSPSSSSQYARRSSSTNHEGSSSTSSYGHYYSGLYFSPWSNNNGPCGDGHDKGG | 176 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 11184109 | 11184636 | + | MC08g1277 | Mch8g1482 | 695103 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch8g1482 | 176 | MobiDBLite | consensus disorder prediction | 120 | 147 | - | - | |
Mch8g1482 | 176 | Coils | Coil | 89 | 109 | - | - | |
Mch8g1482 | 176 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 4-RELATED | 8 | 132 | - | - | |
Mch8g1482 | 176 | Pfam | Lateral organ boundaries (LOB) domain | 10 | 107 | IPR004883 | - | |
Mch8g1482 | 176 | ProSiteProfiles | LOB domain profile. | 9 | 110 | IPR004883 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch7g0754 | Mch-Chr7:12166732 | Mch8g1482 | Mch-Chr8:11184109 | 2.89E-38 | dispersed | |
Mch8g1482 | Mch-Chr8:11184109 | Mch8g2579 | Mch-Chr8:28931017 | 2.03E-58 | dispersed | |
Mch2g1427 | Mch-Chr2:10525986 | Mch8g1482 | Mch-Chr8:11184109 | 1.38E-49 | transposed | |
Mch4g2495 | Mch-Chr4:25700778 | Mch8g1482 | Mch-Chr8:11184109 | 4.20E-47 | transposed | |
Mch3g1425 | Mch-Chr3:16660368 | Mch8g1482 | Mch-Chr8:11184109 | 3.00E-59 | wgd | |
Mch4g2198 | Mch-Chr4:23699283 | Mch8g1482 | Mch-Chr8:11184109 | 1.38E-69 | wgd | |
Mch6g0126 | Mch-Chr6:743224 | Mch8g1482 | Mch-Chr8:11184109 | 2.35E-73 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
43872 | PF03195 | LOB | 2.40E-42 | No_clan | Mch | TF |
Pathway information
