Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g1491 ATGAGGAACAAAATAGAGTGGCGGCAAACAATCTATAGACGGAGAGGAGAGAATTTTTTAGTCAAAAATATGAGTTTCATTCATTTTTCAAACCAAGCTCAAAGCTATGGAGTTTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCCGTTTCTCTGTCCGATCCACGAATCTCTGAATCTGGAACCTACTGTGGAACCTCGAAGGCGCCGCCCAAATCCAGATTCATCCCCACCTTCATCGCAGAAATGGAAGCCATGTCCGAGCTTCTCACAACTCGCAATTGGACCACTCACTTCGTCAACTCCACGCCTCCCATGTTCGCCCTCTCTCAATGCTTCCACGACCTCTCCCACACCGATTGCCTCCTCTGCTACGCCGCCAGCCGCACCACCCTCCCCCGCTGCCTCCCCGCCCTCTCCGCCCGCATCTTCCTCGACGGCTGCTTCCTCCGCTACGACAACTACAGTTTCTACAAGGAATCCACCGATCCGATTGCGGATTCCCTCAATTGCACCTCCGGAGTTGGCGAGATCGTCGACGGAACTCAGAGGGTAGGGTTTGTGAGGAATGTAGGGCTGTCTGTTGGCGCTGTGACGAGGGCGGCCATGGCGGACGGCGGATTTGGAATTGGTGAGGTCAATGGAGTGTATGCCTTGGCGCAGTGTTGGGGGAGCGTTGAGCCTGCGGGGTGCAGGGATTGCTTGGACAAGGCGAGGAGGAGCATTAGAAACTGCTTGCCGAGTACAGAAGGGAGGGCTATGAATGCTGGGTGTTATCTGAGGTATTCGACTGTGAAATTCTATAATGATGGGCAAGAACAACCGGATGATGATGATGATGGATTTTCTGGAAGAAGAGCTGTTGTTGCCATTGTCTTAGCTTCAGCTGCCTCCTTGATCATCTCCCTTTCAGCTGTTTTTGCATGCTATACAAGAATATCAAAGTTCAAGAAAGAGAAGAAAAAACAATCCCTTATTCCAACTTCCTTCAAGGATTCCAATTTGAATTTCAAGTATGAAACGCTTGAAAAGGCAACAGATTACTTCAACCCATCAAGTAAGATAGGCCAAGGTGGAGCTGGTTCTGTATATAAAGGAACTCTTCCAAACGGGCAGATTGTTGCTGTGAAGAGATTGGTTTTTCATACCAGGCAATGGGTGGATGAGTTCTTCAACGAGGTGAATTTGATCCGCGGAATCCAACACAAAAACCTCGTCACGCTTTTAGGTTGCAGCATCGAAGGGCCCGAAAGTCTGTTGGTATACGAGTATATCACGAATAGGAGCCTCGATCACTTCATTTTCGATAAGAACAAGGTTCAGATTCTAAATTGGAAGCAGCGTTTCGACATTATTGTGGGAGCAGCTGAGGGGCTTGCACATCTTCATGAAGGTTGTAAAATAAGAATAATCCATAGAGACATAAAGAGCAGCAATGTTCTGCTGGATGAAAACTTCACTCCAAAGATTGCTGACTTCGGCCTCGCTCGGCATTTTGCTGCCGATCAGACTCATCTTAGCACTGGAATTGCTGGGACGCTTGGTTACATGGCTCCCGAGTATCTCGTTCGAGGACAACTTACGGAGAAAGCAGATGTCTATAGTTTTGGAGTTCTGATACTCGAGATCGTTTGCGGCAGAAGAAACAGTTCATTTGTGGAGAACTCTACCCCACTCCTCCAAGCAGTTTGGGAACTGTACAAATCAGGGAGAATAGCTGAAGCCATTGACCCTTGCCTGAATAATGATTTCCCTGCAAGAGAAGCCATGGATGTTCTGCAAATAGGGCTGTTATGCACCCAAGCCCAAGCTTCTTTGAGACCGTCAATGGTGGCGATAGCGAAACTGCTAACCAGTGAAGGAGAAAGGGAGGTTGAGATCCCAAAACAGCCTCCATTTTTGAATCCATGTGGACCCTCAAGAAGGTCTTGCAGAATTAGCAGCTTGGTATCTCATGCAGTTTCCAAACTGGAAATTTCTTCTGCCACATCAACAACAGACTCAGGTTCTTCCTCTAACTTGCCTTCAAGAAGTGGAGATTTTGCTGATTTGAATTCAAATTGA 2067 47.41 MRNKIEWRQTIYRRRGENFLVKNMSFIHFSNQAQSYGVSFFFFFFFFFFSVSLSDPRISESGTYCGTSKAPPKSRFIPTFIAEMEAMSELLTTRNWTTHFVNSTPPMFALSQCFHDLSHTDCLLCYAASRTTLPRCLPALSARIFLDGCFLRYDNYSFYKESTDPIADSLNCTSGVGEIVDGTQRVGFVRNVGLSVGAVTRAAMADGGFGIGEVNGVYALAQCWGSVEPAGCRDCLDKARRSIRNCLPSTEGRAMNAGCYLRYSTVKFYNDGQEQPDDDDDGFSGRRAVVAIVLASAASLIISLSAVFACYTRISKFKKEKKKQSLIPTSFKDSNLNFKYETLEKATDYFNPSSKIGQGGAGSVYKGTLPNGQIVAVKRLVFHTRQWVDEFFNEVNLIRGIQHKNLVTLLGCSIEGPESLLVYEYITNRSLDHFIFDKNKVQILNWKQRFDIIVGAAEGLAHLHEGCKIRIIHRDIKSSNVLLDENFTPKIADFGLARHFAADQTHLSTGIAGTLGYMAPEYLVRGQLTEKADVYSFGVLILEIVCGRRNSSFVENSTPLLQAVWELYKSGRIAEAIDPCLNNDFPAREAMDVLQIGLLCTQAQASLRPSMVAIAKLLTSEGEREVEIPKQPPFLNPCGPSRRSCRISSLVSHAVSKLEISSATSTTDSGSSSNLPSRSGDFADLNSN 688
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 11300880 11304974 - MC08g1285 Mch8g1491 695112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g1491 688 ProSiteProfiles Protein kinase domain profile. 350 598 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g1491 688 FunFam Cysteine-rich receptor-like protein kinase 42 84 158 - -
Mch8g1491 688 FunFam Cysteine-rich receptor-like protein kinase 2 317 425 - -
Mch8g1491 688 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 204 656 IPR052059 GO:0004674(PANTHER)|GO:0006468(PANTHER)
Mch8g1491 688 ProSiteProfiles Gnk2-homologous domain profile. 58 158 IPR002902 -
Mch8g1491 688 SUPERFAMILY Protein kinase-like (PK-like) 325 618 IPR011009 -
Mch8g1491 688 Gene3D Phosphorylase Kinase; domain 1 310 425 - -
Mch8g1491 688 CDD STKc_IRAK 356 619 - -
Mch8g1491 688 ProSiteProfiles Gnk2-homologous domain profile. 167 268 IPR002902 -
Mch8g1491 688 FunFam Cysteine-rich receptor-like protein kinase 2 426 626 - -
Mch8g1491 688 FunFam Cysteine-rich receptor-like protein kinase 3 172 268 - -
Mch8g1491 688 MobiDBLite consensus disorder prediction 662 688 - -
Mch8g1491 688 Gene3D - 187 268 IPR038408 -
Mch8g1491 688 Gene3D - 60 158 IPR038408 -
Mch8g1491 688 Gene3D Transferase(Phosphotransferase) domain 1 426 630 - -
Mch8g1491 688 SMART serkin_6 350 599 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g1491 688 ProSitePatterns Serine/Threonine protein kinases active-site signature. 471 483 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch8g1491 688 Pfam Protein kinase domain 352 575 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g1491 688 Pfam Salt stress response/antifungal 82 156 IPR002902 -
Mch8g1491 688 Pfam Salt stress response/antifungal 208 265 IPR002902 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch5g1926 Mch-Chr5:19192939 Mch8g1491 Mch-Chr8:11300880 4.66E-85 dispersed
Mch6g0470 Mch-Chr6:3119654 Mch8g1491 Mch-Chr8:11300880 1.24E-70 dispersed
Mch8g1491 Mch-Chr8:11300880 Mch9g2261 Mch-Chr9:22937256 9.81E-183 dispersed
Mch8g1491 Mch-Chr8:11300880 Mch3g1208 Mch-Chr3:15262262 2.90E-92 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77612 PF00069 Pkinase 3.10E-44 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g1491 - - - 0.0