Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g1508 ATGGCAAAGATCATTCGGCGTGTTGCTTCAGGCCTTCCATGTTTGAAATCTGACCAAAAGAAACTGGTCATGGGTAGTGCACCAGCGAAGAAATATCCTGCGAACTCAAAAGATTATAAGTTATACGAAGAAGTTGGTGAGGGTGTTAGTGCAACCGTGTATAGGGCTCTTTGTGTCCCATTAAATGAGATTGTTGCTGTTAAGGTTCTTGACTTGGAGAGGTGCAATAATGACCTGGAAGGTACCCGTCGAGAGGTAAACACAATGTCCTTGGTTAATCATACCAACATATTGCGAGCACATTGTTCTTTCACAACTGGTTACAACCTTTGGATAGTGATGCCATACATGGGTGGAGGATCATGCCTTCATATAATGAAATTGGCCCATCCTGAAGGTCTCGAAGAGCCTGTTATTGCTATTTTGTTGCTTGAGGTTCTCAAAGCTCTTGTTTACCTCCACTCCCAAGGTCACATTCATAGAGATGTGAAGGCTGGGAATATTTTAATTGATTCAAATGGTGCAGTCAAGCTAGCTGATTTTGGAGTGTCAGCATGTATCTTTGACACTGGAGATAGACAACGTTCAAGAAATACTTTTGTGGGAACTCCTTGCTGGATGGCTCCTGAAGTTATGCAGCAATTTCATGGATATGACTTCAAGGCAGACATCTGGTCATTTGGAATAACAGCACTTGAACTTGCTCATGGACATGCCCCATTTTCCAAGTATCCACCTATGAAGGTTTTGCTGATGACCTTACAAAGTGCACCTCCTGGTCTTCATTATGAACGAGATAAGAGATTCTCAAAGTCATTTAAAGAAATGGTAGCTGCATGCTTAGTGAAGGATCCAAAAAAACGTCCCGAAGCAGAGAAGCTTCTGAAGCATCCATTTTTTAAACAAGGACACCCAAATGAATATCTTGTTCGAACTCTTCTTAGTGGTCTTCCTTCTCTAGAGGATCGCTTCAAGATGTTAAAGGCAAAAGAGGCTGAACTTCTTGGGCAGAACGAGACACTATATGGTGATAAAGAGCAACTGTCACAGAAAGAGTATGTTAGAGGAGTGAGTGCCTGGAACTTCAACCTTGATGATTTGAAAAGTCAGGCTGCTCTTCATATTCAGGATGATACAATTGTTAAGGAAAAGGACGTGGGAGTAAATGAAAGACAAGAAGATGAAAAGGAATTTGGTTTACATGCAGAAAGGACATCGGCGGAAAAACTGAGCTGTTCCAATCCTACACCCAGCTGTGAGGGTGTGAGTGATCTTCGTTCTTTAGAGAGTTTTCCTGCTTCGCTTCGTACCAGGCCTATTGGAGCGACAAATAATGGCGATGAAATTTTCGAGGAAGATATGAACAGAGCTAATCGAAGAAAGGACGATATAAACAGAACTAATCCAAGAGTGGTGGATCAAGAATTTAGAACCAAAGTAAATTATACATCAAATGGTGCTGCTGCTCAGCTAAAAGAACACTCTAAAGCTTCTTCAGCCGGACTTGGAAGAAAGGATCCTACGAGCAGCTTGTGTACTGCAGTTTCTGGAAGTTTGACCAGTCCATTCACCACAAACCTCTCAGCTTCCTCACTTATCCCATCACTGCACTGCATTTTGCAGCAGAATGAGTTGCAGAGGGAAGAAATTATAAAGTCAATCAAGTATCTGGAACAAATCTCTGGCATGTACAAAGAGTCAGCTGAAGAGAGTATGAACGACTTCATGCAGACACTTCCAACACCAGCATCCTCCAGAGAGAGAGAATTATGGTCTCAAGCGATTCATCTGCATCAGAGTGTCAGCACACTTGCGGAGGAATTATCTAAACAGAGGCTAAAAAATGCTCAGTTGGAAAGAAAATTGAATGCCTTGGCACGCAAAGAGGAAGTATTATGA 1899 42.13 MAKIIRRVASGLPCLKSDQKKLVMGSAPAKKYPANSKDYKLYEEVGEGVSATVYRALCVPLNEIVAVKVLDLERCNNDLEGTRREVNTMSLVNHTNILRAHCSFTTGYNLWIVMPYMGGGSCLHIMKLAHPEGLEEPVIAILLLEVLKALVYLHSQGHIHRDVKAGNILIDSNGAVKLADFGVSACIFDTGDRQRSRNTFVGTPCWMAPEVMQQFHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQSAPPGLHYERDKRFSKSFKEMVAACLVKDPKKRPEAEKLLKHPFFKQGHPNEYLVRTLLSGLPSLEDRFKMLKAKEAELLGQNETLYGDKEQLSQKEYVRGVSAWNFNLDDLKSQAALHIQDDTIVKEKDVGVNERQEDEKEFGLHAERTSAEKLSCSNPTPSCEGVSDLRSLESFPASLRTRPIGATNNGDEIFEEDMNRANRRKDDINRTNPRVVDQEFRTKVNYTSNGAAAQLKEHSKASSAGLGRKDPTSSLCTAVSGSLTSPFTTNLSASSLIPSLHCILQQNELQREEIIKSIKYLEQISGMYKESAEESMNDFMQTLPTPASSRERELWSQAIHLHQSVSTLAEELSKQRLKNAQLERKLNALARKEEVL 632
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 11515694 11526722 - MC08g1300 Mch8g1508 695129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g1508 632 ProSiteProfiles Protein kinase domain profile. 39 300 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g1508 632 FunFam Serine/threonine-protein kinase BLUS1 28 116 - -
Mch8g1508 632 ProSitePatterns Protein kinases ATP-binding region signature. 45 68 IPR017441 GO:0005524(InterPro)
Mch8g1508 632 Pfam Protein kinase domain 39 300 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g1508 632 Coils Coil 601 628 - -
Mch8g1508 632 CDD STKc_OSR1_SPAK 37 300 - -
Mch8g1508 632 FunFam serine/threonine-protein kinase BLUS1 isoform X1 120 353 - -
Mch8g1508 632 Gene3D Transferase(Phosphotransferase) domain 1 120 343 - -
Mch8g1508 632 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 30 618 IPR047173 GO:0043539(InterPro)
Mch8g1508 632 SMART serkin_6 39 300 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g1508 632 Gene3D Phosphorylase Kinase; domain 1 28 115 - -
Mch8g1508 632 MobiDBLite consensus disorder prediction 483 507 - -
Mch8g1508 632 SUPERFAMILY Protein kinase-like (PK-like) 37 324 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g1743 Mch-Chr10:17343255 Mch8g1508 Mch-Chr8:11515694 2.35E-159 dispersed
Mch5g0066 Mch-Chr5:447074 Mch8g1508 Mch-Chr8:11515694 4.52E-105 dispersed
Mch7g0995 Mch-Chr7:14165140 Mch8g1508 Mch-Chr8:11515694 4.00E-58 dispersed
Mch8g1055 Mch-Chr8:7413828 Mch8g1508 Mch-Chr8:11515694 3.69E-176 dispersed
Mch8g1508 Mch-Chr8:11515694 Mch9g2066 Mch-Chr9:21755076 3.23E-55 dispersed
Mch4g2219 Mch-Chr4:23817061 Mch8g1508 Mch-Chr8:11515694 8.58E-249 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77614 PF00069 Pkinase 6.20E-59 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g1508 K08835 - mdm:103429120 685.641