Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g1508 ATGGCAAAGATCATTCGGCGTGTTGCTTCAGGCCTTCCATGTTTGAAATCTGACCAAAAGAAACTGGTCATGGGTAGTGCACCAGCGAAGAAATATCCTGCGAACTCAAAAGATTATAAGTTATACGAAGAAGTTGGTGAGGGTGTTAGTGCAACCGTGTATAGGGCTCTTTGTGTCCCATTAAATGAGATTGTTGCTGTTAAGGTTCTTGACTTGGAGAGGTGCAATAATGACCTGGAAGGTACCCGTCGAGAGGTAAACACAATGTCCTTGGTTAATCATACCAACATATTGCGAGCACATTGTTCTTTCACAACTGGTTACAACCTTTGGATAGTGATGCCATACATGGGTGGAGGATCATGCCTTCATATAATGAAATTGGCCCATCCTGAAGGTCTCGAAGAGCCTGTTATTGCTATTTTGTTGCTTGAGGTTCTCAAAGCTCTTGTTTACCTCCACTCCCAAGGTCACATTCATAGAGATGTGAAGGCTGGGAATATTTTAATTGATTCAAATGGTGCAGTCAAGCTAGCTGATTTTGGAGTGTCAGCATGTATCTTTGACACTGGAGATAGACAACGTTCAAGAAATACTTTTGTGGGAACTCCTTGCTGGATGGCTCCTGAAGTTATGCAGCAATTTCATGGATATGACTTCAAGGCAGACATCTGGTCATTTGGAATAACAGCACTTGAACTTGCTCATGGACATGCCCCATTTTCCAAGTATCCACCTATGAAGGTTTTGCTGATGACCTTACAAAGTGCACCTCCTGGTCTTCATTATGAACGAGATAAGAGATTCTCAAAGTCATTTAAAGAAATGGTAGCTGCATGCTTAGTGAAGGATCCAAAAAAACGTCCCGAAGCAGAGAAGCTTCTGAAGCATCCATTTTTTAAACAAGGACACCCAAATGAATATCTTGTTCGAACTCTTCTTAGTGGTCTTCCTTCTCTAGAGGATCGCTTCAAGATGTTAAAGGCAAAAGAGGCTGAACTTCTTGGGCAGAACGAGACACTATATGGTGATAAAGAGCAACTGTCACAGAAAGAGTATGTTAGAGGAGTGAGTGCCTGGAACTTCAACCTTGATGATTTGAAAAGTCAGGCTGCTCTTCATATTCAGGATGATACAATTGTTAAGGAAAAGGACGTGGGAGTAAATGAAAGACAAGAAGATGAAAAGGAATTTGGTTTACATGCAGAAAGGACATCGGCGGAAAAACTGAGCTGTTCCAATCCTACACCCAGCTGTGAGGGTGTGAGTGATCTTCGTTCTTTAGAGAGTTTTCCTGCTTCGCTTCGTACCAGGCCTATTGGAGCGACAAATAATGGCGATGAAATTTTCGAGGAAGATATGAACAGAGCTAATCGAAGAAAGGACGATATAAACAGAACTAATCCAAGAGTGGTGGATCAAGAATTTAGAACCAAAGTAAATTATACATCAAATGGTGCTGCTGCTCAGCTAAAAGAACACTCTAAAGCTTCTTCAGCCGGACTTGGAAGAAAGGATCCTACGAGCAGCTTGTGTACTGCAGTTTCTGGAAGTTTGACCAGTCCATTCACCACAAACCTCTCAGCTTCCTCACTTATCCCATCACTGCACTGCATTTTGCAGCAGAATGAGTTGCAGAGGGAAGAAATTATAAAGTCAATCAAGTATCTGGAACAAATCTCTGGCATGTACAAAGAGTCAGCTGAAGAGAGTATGAACGACTTCATGCAGACACTTCCAACACCAGCATCCTCCAGAGAGAGAGAATTATGGTCTCAAGCGATTCATCTGCATCAGAGTGTCAGCACACTTGCGGAGGAATTATCTAAACAGAGGCTAAAAAATGCTCAGTTGGAAAGAAAATTGAATGCCTTGGCACGCAAAGAGGAAGTATTATGA 1899 42.13 MAKIIRRVASGLPCLKSDQKKLVMGSAPAKKYPANSKDYKLYEEVGEGVSATVYRALCVPLNEIVAVKVLDLERCNNDLEGTRREVNTMSLVNHTNILRAHCSFTTGYNLWIVMPYMGGGSCLHIMKLAHPEGLEEPVIAILLLEVLKALVYLHSQGHIHRDVKAGNILIDSNGAVKLADFGVSACIFDTGDRQRSRNTFVGTPCWMAPEVMQQFHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQSAPPGLHYERDKRFSKSFKEMVAACLVKDPKKRPEAEKLLKHPFFKQGHPNEYLVRTLLSGLPSLEDRFKMLKAKEAELLGQNETLYGDKEQLSQKEYVRGVSAWNFNLDDLKSQAALHIQDDTIVKEKDVGVNERQEDEKEFGLHAERTSAEKLSCSNPTPSCEGVSDLRSLESFPASLRTRPIGATNNGDEIFEEDMNRANRRKDDINRTNPRVVDQEFRTKVNYTSNGAAAQLKEHSKASSAGLGRKDPTSSLCTAVSGSLTSPFTTNLSASSLIPSLHCILQQNELQREEIIKSIKYLEQISGMYKESAEESMNDFMQTLPTPASSRERELWSQAIHLHQSVSTLAEELSKQRLKNAQLERKLNALARKEEVL 632
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 11515694 11526722 - MC08g1300 Mch8g1508 695129

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g1508 632 ProSiteProfiles Protein kinase domain profile. 39 300 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g1508 632 FunFam Serine/threonine-protein kinase BLUS1 28 116 - -
Mch8g1508 632 ProSitePatterns Protein kinases ATP-binding region signature. 45 68 IPR017441 GO:0005524(InterPro)
Mch8g1508 632 Pfam Protein kinase domain 39 300 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g1508 632 Coils Coil 601 628 - -
Mch8g1508 632 CDD STKc_OSR1_SPAK 37 300 - -
Mch8g1508 632 FunFam serine/threonine-protein kinase BLUS1 isoform X1 120 353 - -
Mch8g1508 632 Gene3D Transferase(Phosphotransferase) domain 1 120 343 - -
Mch8g1508 632 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 30 618 IPR047173 GO:0043539(InterPro)
Mch8g1508 632 SMART serkin_6 39 300 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g1508 632 Gene3D Phosphorylase Kinase; domain 1 28 115 - -
Mch8g1508 632 MobiDBLite consensus disorder prediction 483 507 - -
Mch8g1508 632 SUPERFAMILY Protein kinase-like (PK-like) 37 324 IPR011009 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g1508 K08835 - - mdm:103429120 685.641
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g1743 Mch-Chr10:17343255 Mch8g1508 Mch-Chr8:11515694 2.35E-159 dispersed
Mch5g0066 Mch-Chr5:447074 Mch8g1508 Mch-Chr8:11515694 4.52E-105 dispersed
Mch7g0995 Mch-Chr7:14165140 Mch8g1508 Mch-Chr8:11515694 4.00E-58 dispersed
Mch8g1055 Mch-Chr8:7413828 Mch8g1508 Mch-Chr8:11515694 3.69E-176 dispersed
Mch8g1508 Mch-Chr8:11515694 Mch9g2066 Mch-Chr9:21755076 3.23E-55 dispersed
Mch4g2219 Mch-Chr4:23817061 Mch8g1508 Mch-Chr8:11515694 8.58E-249 wgd
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Mch11g1051 . 1 686 MAP Kinase Kinase Kinase Kinase AT1G53165 62.2 6.8e-216 747.3
Mch11g1051 . 1 686 MAP Kinase Kinase Kinase Kinase AT3G15220 63.0 1.7e-222 769.2
Mch9g2066 . 268 533 MAP Kinase Kinase Kinase Kinase AT3G15220 51.3 4.3e-69 259.6
Mch9g2066 . 1 845 MAP Kinase Kinase Kinase Kinase AT1G69220 57.6 7.7e-243 837.0
Mch11g1051 . 23 267 MAP Kinase Kinase Kinase Kinase AT1G69220 52.0 6.2e-67 252.7
Mch4g2219 . 1 659 MAP Kinase Kinase Kinase Kinase AT5G14720 67.1 7.6e-252 866.7
Mch8g1508 . 24 630 MAP Kinase Kinase Kinase Kinase AT5G14720 55.1 7.2e-194 674.1
Mch10g1743 . 9 726 MAP Kinase Kinase Kinase Kinase AT4G24100 63.6 1.3e-241 832.8
Mch10g1743 . 11 727 MAP Kinase Kinase Kinase Kinase AT4G10730 63.9 6.0e-244 840.5
Mch8g1055 . 4 494 MAP Kinase Kinase Kinase Kinase AT1G70430 51.9 3.7e-133 472.2
Mch10g1743 . 5 353 MAP Kinase Kinase Kinase Kinase AT1G70430 59.0 9.8e-118 421.0
Mch8g1055 . 1 696 MAP Kinase Kinase Kinase Kinase AT1G79640 59.1 6.2e-214 740.7
Mch8g1508 . 30 377 MAP Kinase Kinase Kinase Kinase AT1G79640 67.8 1.5e-143 506.9
Mch4g2219 . 1 328 MAP Kinase Kinase Kinase Kinase AT1G23700 59.8 1.7e-104 376.7
Mch8g1508 . 24 350 MAP Kinase Kinase Kinase Kinase AT1G23700 56.1 1.3e-96 350.5
Mch8g1055 . 6 324 MAP Kinase Kinase Kinase Kinase AT1G23700 52.5 1.0e-88 324.3
Mch10g1743 . 15 306 MAP Kinase Kinase Kinase Kinase AT1G23700 50.8 6.3e-75 278.5
Mch5g0066 . 19 500 MAP Kinase Kinase Kinase Kinase AT4G14480 55.5 3.9e-141 498.4
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0017912 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 1 2 1 0 6
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77614 PF00069 Pkinase 6.20E-59 CL0016 Mch PK