Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g1510 GTTTCTCTACTTCTCGATAGAGCATTGTTAATCTACAATCACACACCAATCCAATCAAACAATCCACGTGTCCCCTTAATTGTACGAAATGACGAATTTACTCTCTCTCTGGACCATAATTCGCTAATACAACAGGCGTACCACCTGAATTCATGGTCGCCCACGCAGATGAATAGAAAAAAAAAGAAAAAAGAAAAAAAGAGTAATAAAAATAATAAATATCCTCGTGAGTGGGACCCACCTATGTTCCACGTTAATCGTCTTTGCAAATTTCCGATTCTCACAAAACCGATTTGGGATTTCGATCTTCAGTCTTGTGAGGAGTGGAATTTGAGTTCGAAAATGGCGGTTCTGCAGCTTCCTTGTACGCGGACTATTGATAGTTCTTCTTCGCCATTGTTGAGAGGTAGTAGCTCCTCGTTGTTTTGGGGAAGAAATTTTATACTGGCTGGTCCGAGGGTGAAAGCTCGATTCAATGGTCGAGTTGTTAAGGTTTTCGCGATGACGGATGGCTCTTCTTCTTCTTCTTCTTCTTCTTCATTTAAGATGAACCTCAATGAGTACATGGTTACTCTTGAGAAACCGCTCGGCATTCGGTTCGCGATTTCTGTCGATGGAAGAATCTTTGTTCATGCGCTCAAGAAAGGGGGTAATGCTGAAAAGTCAAGAATAATCATGGTGGGGGACACTTTAAAGAAGGCAAGCGATTCATCAGGCGTCAAGCTTATAGAGATCAAAGACTTTGGTGATACACAGATGATGCTGAAGGAGAAAGCAGGGTCTTTTAGTCTGGTTCTTGAAAGACCTTTCACGCCATTTCCGATTCAACAACTGCTGCTTTCAGACGATCTAGATATTCTATTTAACAGAGGTAGAGTACCTATTGCTACTTGGAAGAAAGAAGTTTTGGCATCAAATTTACAAGCATCAGATGCAAGCAGTGGGAGTTCTGGCTTTACGACTTTCTCCTCTAAGTTCTCAACATCACAAGGTTGGAAATTTCTTAATTATCAAAATGGAGATGTAAAATCACATATGCAGAGAAAAATTCTCACGCCTCAAATCAGCCAAATTGTTGGTATATTTACTGAAGAGGAGCCTGGAGATGGAGAATGGGCTCATGGGAGCTTCCCTCTAGATGAATACGTAAAGGCGTTAGAACGGTCGAAAGGGGAGCTATATTATGATCACTCTCGTGGTATGAGCTACAGTAAGATCACAGAGCAAATTTATGTGGGGTCATGTATACAGACTGAAGCAGAAGTGGAGACTTTGTCAAATAGCGTGGGAGTCACTGCTGTACTGAATTTTCAAAGTGCAACTGAGGCAGGAAACTGGGGAATTAATTCCAAGTTAATCAATGAGTCATGCCAAAAATTTGATATTCTCATGATCAACTACCCCATCAGGGAGGGAGATTCTTATGATTTGAGGAAAAAACTTCCATTCTGTGTGGGCCTACTTCTACGATTGTTGAAAAAGAAGCACCGAGTTTTTGTAACTTGTACCACTGGTTTTGATCGATCTCCAGCAAGTGTGATTGCATATCTACACTGGATGACCGATACTTCTCTTCATGCAGCTTATAACTTTATCACCAGTTTGCACTCCTGCAAACCTGACAGGCCAGCAATCGCTTGGGCTACATGGGATCTGATAGCAATGGTGGAAAATGGAAGACATGATGGACCCCCCACTCATGCTGTTACCTTCGTATGGAATGGACAAGAGGGGGAGGATGTAAATTTGGTTGGAGATTTTACTGGTAACTGGAAAGAACCGGTCAAGGCAAGTCACAAGGGTGGGCCCAGATATGAAGTAGAAATGAAACTTCCTCAGGGAAAGTACTACTACAAGTACATCACAAATGGCCAGTGGAGGCACTCAACAACTTCACCTGCTGAAAGGGATGATAGAGGGAATGTCAACAACGTAATAGTCATTGGTGATACAGCCAGTGTTAGGCCTTCAGTTCAACCGCAAATAAAAGATGCAAATACTGTGAAGGTAATTGAAAGACCGCTGACAGAAAATGAGCGGTTTACGCTGGCGAAAGCGGCTCGTTGTGTTGCATTTTCTGTATGTCCAATTAGACTAACTCCCAAGTAG 2109 42.2 VSLLLDRALLIYNHTPIQSNNPRVPLIVRNDEFTLSLDHNSLIQQAYHLNSWSPTQMNRKKKKKEKKSNKNNKYPREWDPPMFHVNRLCKFPILTKPIWDFDLQSCEEWNLSSKMAVLQLPCTRTIDSSSSPLLRGSSSSLFWGRNFILAGPRVKARFNGRVVKVFAMTDGSSSSSSSSSFKMNLNEYMVTLEKPLGIRFAISVDGRIFVHALKKGGNAEKSRIIMVGDTLKKASDSSGVKLIEIKDFGDTQMMLKEKAGSFSLVLERPFTPFPIQQLLLSDDLDILFNRGRVPIATWKKEVLASNLQASDASSGSSGFTTFSSKFSTSQGWKFLNYQNGDVKSHMQRKILTPQISQIVGIFTEEEPGDGEWAHGSFPLDEYVKALERSKGELYYDHSRGMSYSKITEQIYVGSCIQTEAEVETLSNSVGVTAVLNFQSATEAGNWGINSKLINESCQKFDILMINYPIREGDSYDLRKKLPFCVGLLLRLLKKKHRVFVTCTTGFDRSPASVIAYLHWMTDTSLHAAYNFITSLHSCKPDRPAIAWATWDLIAMVENGRHDGPPTHAVTFVWNGQEGEDVNLVGDFTGNWKEPVKASHKGGPRYEVEMKLPQGKYYYKYITNGQWRHSTTSPAERDDRGNVNNVIVIGDTASVRPSVQPQIKDANTVKVIERPLTENERFTLAKAARCVAFSVCPIRLTPK 702
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 11601998 11607924 + MC08g1302 Mch8g1510 695131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g1510 702 ProSiteProfiles PDZ domain profile. 189 270 IPR001478 GO:0005515(InterPro)
Mch8g1510 702 Pfam Dual specificity phosphatase, catalytic domain 420 534 IPR000340 GO:0016311(InterPro)
Mch8g1510 702 Pfam Glycogen recognition site of AMP-activated protein kinase 569 650 IPR032640 -
Mch8g1510 702 Gene3D Protein tyrosine phosphatase superfamily 395 666 IPR029021 -
Mch8g1510 702 PANTHER PHOSPHOGLUCAN PHOSPHATASE LSF1, CHLOROPLASTIC 166 696 - GO:0005983(PANTHER)|GO:0009507(PANTHER)|GO:0043036(PANTHER)
Mch8g1510 702 Gene3D Immunoglobulins 556 652 IPR013783 -
Mch8g1510 702 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 394 540 IPR029021 -
Mch8g1510 702 SUPERFAMILY E set domains 566 649 IPR014756 -
Mch8g1510 702 MobiDBLite consensus disorder prediction 54 76 - -
Mch8g1510 702 FunFam Phosphoglucan phosphatase LSF1, chloroplastic 556 652 - -
Mch8g1510 702 ProSiteProfiles Dual specificity protein phosphatase domain profile. 402 561 IPR020422 GO:0006470(InterPro)
Mch8g1510 702 CDD E_set_AMPKbeta_like_N 569 648 - -
Mch8g1510 702 CDD DSP_laforin-like 401 547 IPR045204 GO:0019203(InterPro)
Mch8g1510 702 SUPERFAMILY PDZ domain-like 171 275 IPR036034 GO:0005515(InterPro)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g1510 - - - 0.0