Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g1517 ATGAAAGAGAAGAGTGAAACCGGAGGTGGGTATGTGAGGGCGGATCAGATAGATCTGAAGAGCTTAGACGAGCAGTTGCAGAGACATTTGAGCAAGGCATGGACCATGGAGAAGAACAAGAGGAGGGAGGACGAGGAGGGAGGCGGCGGCGGCGGCGGAGGAGGACGAGGAGGAGGAGGAGGAGGCGGAAGGCCGGCGATCACGAGGCAGGAGTGGGAGATTGACCCTTCTAAACTCATCATCAAGAGCGTTATAGCTCGGGGCACTTTTGGAACTGTTCATCGCGGGATTTATGACGGCCAAGACGTTGCCGTTAAACTTCTTGACTGGGGGGAGGAGGGTCATAGGTCAGAGGCGGAAATCGCTTCTCTTAGAGCAGCTTTTACGCAAGAAGTTGCTGTCTGGCACAAGCTTGACCATCCTAATGTTACAAAGTTTATAGGAGCAACAATAGGCTCCTCAGATCTACATATACAAACGGAAAATGGCCAAATTGGCATGCCGAGCAATATTTGTTGTGTCGTCGTGGAATATTGTCCTGGAGGTGCTCTGAAAACGTACCTTATAAAGAATCGGAGGAAAAAGCTGGCATTCAAAGTAGTCGTACAGCTAGCATTAGACCTTGCGAGAGGGTTGAGCTATCTTCATTCGCAGAAGATTGTTCACAGAGATGTCAAAACCGAAAATATGCTTCTTGACAAAACGAGAACAGTTAAAATTGCAGACTTTGGTGTTGCTCGTGTTGAGGCCTCAAACCCCAACGATATGACTGGCGAGACCGGAACCCTTGGTTATATGGCTCCAGAGGTTCTCAATGGCAATCCATATAATAGGAAATGTGATGTCTACAGCTTTGGCATCTGTTTGTGGGAAATATACTGCTGCGATATGCCGTATCCCGACCTTAGCTTCTCAGAAGTGACATCAGCTGTTGTCCGACAGAATCTGAGACCAGAGATACCTCGGTGTTGCCCGAGCTCGCTTGCAAATGTAATGAAGCGATGTTGGGACGCTAACCCGGACAAGCGTCCTGAGATGGACGAGGTGGTAACCATGTTGGAAGCGATTGACACATCGAAGGGCGGAGGCATGATCCCCCTCGATCAGTCTCAAGGCTGTTTTTGCTTCCGCAGGTACCGGGGGCCTTGA 1149 49.78 MKEKSETGGGYVRADQIDLKSLDEQLQRHLSKAWTMEKNKRREDEEGGGGGGGGGRGGGGGGGRPAITRQEWEIDPSKLIIKSVIARGTFGTVHRGIYDGQDVAVKLLDWGEEGHRSEAEIASLRAAFTQEVAVWHKLDHPNVTKFIGATIGSSDLHIQTENGQIGMPSNICCVVVEYCPGGALKTYLIKNRRKKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKTRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVTMLEAIDTSKGGGMIPLDQSQGCFCFRRYRGP 382
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 11697831 11702067 + MC08g1308 Mch8g1517 695138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g1517 382 PRINTS Tyrosine kinase catalytic domain signature 280 302 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch8g1517 382 PRINTS Tyrosine kinase catalytic domain signature 214 232 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch8g1517 382 PRINTS Tyrosine kinase catalytic domain signature 324 346 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch8g1517 382 PRINTS Tyrosine kinase catalytic domain signature 176 189 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch8g1517 382 SUPERFAMILY Protein kinase-like (PK-like) 66 353 IPR011009 -
Mch8g1517 382 CDD STKc_MAP3K-like 85 353 - -
Mch8g1517 382 ProSitePatterns Serine/Threonine protein kinases active-site signature. 220 232 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch8g1517 382 FunFam Serine/threonine-protein kinase HT1 179 364 - -
Mch8g1517 382 MobiDBLite consensus disorder prediction 30 67 - -
Mch8g1517 382 SMART serkin_6 79 356 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g1517 382 Gene3D Transferase(Phosphotransferase) domain 1 179 369 - -
Mch8g1517 382 MobiDBLite consensus disorder prediction 30 49 - -
Mch8g1517 382 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 58 354 IPR051681 GO:0004674(PANTHER)|GO:0005886(PANTHER)
Mch8g1517 382 Pfam Protein tyrosine and serine/threonine kinase 81 353 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch8g1517 382 Gene3D Phosphorylase Kinase; domain 1 66 163 - -
Mch8g1517 382 ProSiteProfiles Protein kinase domain profile. 79 356 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g1517 382 FunFam Kinase suppressor of Ras 1 68 163 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch5g0567 Mch-Chr5:3851478 Mch8g1517 Mch-Chr8:11697831 1.03E-189 dispersed
Mch8g1517 Mch-Chr8:11697831 Mch9g0894 Mch-Chr9:6914541 2.24E-187 dispersed
Mch6g0159 Mch-Chr6:1063651 Mch8g1517 Mch-Chr8:11697831 2.86E-237 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77615 PF07714 PK_Tyr_Ser-Thr 2.00E-64 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g1517 - - - 0.0