Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch8g1531 | TTGTCGTTGGCTATTACACCACCAGTTGGCCGCTCCCCCATTTTGCTAGCACCACCAATTATATCCCCTTTTTCCTCCAAAACTTCTCATGTTCTTCTTTGTTCTTCCTCTCTCCATCAACCCTCTGTCTCTCATTTCTCGCCGGGGAACTCGACAAAACCCCGGAATCCGCCATGGAAGATGAATAGAATCATCCAATCGCCGGCGTCCAAGTTCCGCCCCTTTCGGCGACAATTACTCGGGCCCTCGTCCGATTCCGCCCCCGCCGCCACCGCCGCCGCCGATGAACACCCGAATTACATCCTCCTCCGGTACCAGATCCTCGATCCTGACAGCGACATCGTCGCGCAATGGAACCGCGTGTTTCTGGTGACATCCCTAATCGCCCTGTTCATCGATCCTCTGTTCTTCTACACGTCGTCGGTGGGGGGGCCGGCGTGCCTGACGACGGAGACGGGGCTGGGAGTGGCGATCACGTGCTTCCGGACGGTGACGGACCTGTTCTTCTTGCTGCACATGGTGCTGAAGTTTCGGACGGCGTATGTGGCTCCGAGCTCTAGGGTTTTTGGAAGAGGAGAACTGGTTATGGATGCCAGAGCCATTGCTACGCGCTATTTGAAGTCTGATTTTGTGATTGATCTCGCCGCTACCCTCCCCCTCCCACAGATAGTGATATGGTTGGTGATTCCAGCCACAAGACACTCAAGGGTGGATCACGCCAACAACGCAGTAGCTCTCCTAGTTCTGTTCCAATATGTTCCAAGGCTGTTCGTCATCTTCCCTCTAAACCAAAGAATCATCAAAACCACTGGTGTCATTGTCAAAACTGCCTGGGCTGGTGCTGCCTACAATCTCATCCTTTACATGCTTGCTAGCCATGTGTTGGGATCTACGTGGTATCTTCTAGCCATAGGGCGACAGTTCTCTTGTTGGAAATCAATATGTGCGAAGGAAAATGCATCAAAAGTTCTATCTTGCTTCCCCAGTTACTTGGATTGTAACAGTTTGGATCGACCCGAACGACAATACTGGCTCAACGTCACCCATGTCACTGCCAACTGCGATCCGAGGAACGAAAATGTAAAGTTCAAGTTCGGAATGTTTTCCGATGCTTTTACCAATGATGTTGCCTCCTCACACTTCATTGCAAAGTACTTCTATTGTCTTTGGTGGGGTCTCAGGAATTTGAGTTCATATGGGCAAACTTTGGATACGACGACGTATATAGGCGAGACTTTATTTTGCATATCAACCTGCATATTTGGCTTGATATTATTTTCACAACTCATTGGCAACATGCAGACATGTCTGCAATCAATGACATTAAGACTTGAAGAATGGAGGATAAAGCGAAGAGACACTGAAGAATGGATGAGACGTCGACAATTGCCTCCTGATTTGCAAGAACGAGTTCGTCGATTCGTTCAATATAAATGGCAAGCTACGAGAGGAGTTAATGAAGAATCCATATTGCGTTCATTGCCTATAGACCTTCGTCGAGAGATTCAACAACATTTGTGTTTGTCACTTGTTCGCCGTGTTCCTTTCTTCTCACAAATGGACGATCAGCTTCTGGATGCCATATGTGAACGTCTCATCTCATCTTTGTGTACCCAAGGAACCTATATAGTGCGAGAGGATGACCCAGTTAACGAAATGTTATTTATTATAAGAGGCCAACTCGAGAGCTCCACAACAAATGGCGGTCGATCTGGGTTCTTCAACTCCATCACACTAAAACCAGGTGACTTTTGTGGTGAAGAACTATTGACATGGGCCTTGATGCCAAGTTCCAGTCTAAACATGCCTTCTTCTACTCGAACCGTCCGAGCACTCACCGAAGTCGAAGCTTTCGCCCTTCGAGCAGAGGACCTCAAGTTTGTCGCCAGTCAATTCAAGCGCTTACATAGCAAGAAACTGCAACATGCCTTTAGGTATTATTCTCATCAATGGAGGACATGGGGTGCTTGCTTAATTCAAGTAGCTTGGAGGAGGCTGCAGAAGAGAAAATTGGCAAAGACATTGGCAATGAGAGAGAGCTTATGCTATTTAGATTCCATAGAAGAAGATCACGACTACGATATCGAGCTAGCCGAAGAAAATTACGACGACGACGATATGTCTTCTGCAGACTACCCGAACAAAACTCAACATCTTGGGGCCACAATTTTGGCTTCAAAGTTTGCTGCCAACACTAGAAAAGGAGTTAATCACAAAGGCCAATCATCCAAACCTTCAAGTTTGAAAATGCCAAAGTTGTTTAAACCAGATGAACCTGATTTTTCTATGTAG | 2292 | 47.08 | LSLAITPPVGRSPILLAPPIISPFSSKTSHVLLCSSSLHQPSVSHFSPGNSTKPRNPPWKMNRIIQSPASKFRPFRRQLLGPSSDSAPAATAAADEHPNYILLRYQILDPDSDIVAQWNRVFLVTSLIALFIDPLFFYTSSVGGPACLTTETGLGVAITCFRTVTDLFFLLHMVLKFRTAYVAPSSRVFGRGELVMDARAIATRYLKSDFVIDLAATLPLPQIVIWLVIPATRHSRVDHANNAVALLVLFQYVPRLFVIFPLNQRIIKTTGVIVKTAWAGAAYNLILYMLASHVLGSTWYLLAIGRQFSCWKSICAKENASKVLSCFPSYLDCNSLDRPERQYWLNVTHVTANCDPRNENVKFKFGMFSDAFTNDVASSHFIAKYFYCLWWGLRNLSSYGQTLDTTTYIGETLFCISTCIFGLILFSQLIGNMQTCLQSMTLRLEEWRIKRRDTEEWMRRRQLPPDLQERVRRFVQYKWQATRGVNEESILRSLPIDLRREIQQHLCLSLVRRVPFFSQMDDQLLDAICERLISSLCTQGTYIVREDDPVNEMLFIIRGQLESSTTNGGRSGFFNSITLKPGDFCGEELLTWALMPSSSLNMPSSTRTVRALTEVEAFALRAEDLKFVASQFKRLHSKKLQHAFRYYSHQWRTWGACLIQVAWRRLQKRKLAKTLAMRESLCYLDSIEEDHDYDIELAEENYDDDDMSSADYPNKTQHLGATILASKFAANTRKGVNHKGQSSKPSSLKMPKLFKPDEPDFSM | 763 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 11952081 | 11957099 | - | MC08g1316 | Mch8g1531 | 695152 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch8g1531 | 763 | Gene3D | Helix hairpin bin | 444 | 507 | - | - | |
Mch8g1531 | 763 | Pfam | Cyclic nucleotide-binding domain | 539 | 628 | IPR000595 | - | |
Mch8g1531 | 763 | SUPERFAMILY | Voltage-gated potassium channels | 109 | 438 | - | - | |
Mch8g1531 | 763 | Gene3D | - | 121 | 441 | - | - | |
Mch8g1531 | 763 | CDD | CAP_ED | 516 | 647 | IPR000595 | - | |
Mch8g1531 | 763 | SMART | cnmp_10 | 516 | 647 | IPR000595 | - | |
Mch8g1531 | 763 | MobiDBLite | consensus disorder prediction | 41 | 57 | - | - | |
Mch8g1531 | 763 | SUPERFAMILY | cAMP-binding domain-like | 446 | 641 | IPR018490 | - | |
Mch8g1531 | 763 | ProSiteProfiles | cAMP/cGMP binding motif profile. | 516 | 646 | IPR000595 | - | |
Mch8g1531 | 763 | Gene3D | Jelly Rolls | 514 | 634 | IPR014710 | - | |
Mch8g1531 | 763 | MobiDBLite | consensus disorder prediction | 41 | 60 | - | - | |
Mch8g1531 | 763 | FunFam | Cyclic nucleotide-gated ion channel 1 | 514 | 632 | - | - | |
Mch8g1531 | 763 | Pfam | Ion transport protein | 119 | 443 | IPR005821 | GO:0005216(InterPro)|GO:0006811(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Mch8g1531 | 763 | PANTHER | CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED | 102 | 742 | - | - | |
Mch8g1531 | 763 | FunFam | Cyclic nucleotide-gated ion channel 1 | 443 | 507 | - | - | |
Mch8g1531 | 763 | MobiDBLite | consensus disorder prediction | 732 | 763 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch6g1858 | Mch-Chr6:21088339 | Mch8g1531 | Mch-Chr8:11952081 | 3.89E-212 | dispersed | |
Mch8g1531 | Mch-Chr8:11952081 | Mch8g2727 | Mch-Chr8:30492069 | 1.65E-230 | dispersed | |
Mch11g0634 | Mch-Chr11:4089781 | Mch8g1531 | Mch-Chr8:11952081 | 7.40E-300 | transposed | |
Mch4g2352 | Mch-Chr4:24784532 | Mch8g1531 | Mch-Chr8:11952081 | 3.21E-121 | transposed | |
Mch6g0569 | Mch-Chr6:3847913 | Mch8g1531 | Mch-Chr8:11952081 | 2.12E-302 | transposed | |
Mch9g0659 | Mch-Chr9:4957895 | Mch8g1531 | Mch-Chr8:11952081 | 0 | transposed | |
Mch6g0161 | Mch-Chr6:1077001 | Mch8g1531 | Mch-Chr8:11952081 | 2.49E-17 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch8g1531 | K05391 | - | csv:101216651 | 1281.93 |