Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g1541 ATGGATCTGGAGAGTGCTATTGGGCGCCACCCACTCAAGAAAGATTCATGGAGAGCGGTTTTAACTTTGGCTTACCAGAGCTTGGGGGTAGTTTATGGCGATTTGAGCACTTCCCCTTTGTATGTCTACAAAAGCACTTTCGCTGAGGATATTCAACACTCTGAAACCAACGAGGAGATTTATGGGGTTCTTTCTTTTGTCTTCTGGACCCTCACTCTCATTCCTCTGATTAAGTATGTTTTTATTGTGCTTCGAGCTGATGATAATGGCGAAGGGGGAACTTTCGCCTTATACTCATTGCTCTGCCGCCATGCCCGAGTTAGCTCCCTGCCCAATTGCCAGCTCGCAGATGAGGAACTCTCTGAATATACAAAAGATGGGGTCGATTTAACCACCAAGAACACTTGTGGATCGAGATTGAAATCGACATTAGAGAAGCACAGAGTGTTACAGAGGGTTTTGCTGGTTCTAGCTCTGATTGGGGCATGTATGGTGATTGGAGATGGAGTTCTTACACCTGCAATTTCTGTTTTCTCTGCGGTTTCTGGGCTGGAGCTTTCCATGGCTAAAGAGCACCATCGTTATATTGAAGTCCCAGTTGCGTGTGTCATATTGGTATTCCTGTTTGCGATTCAACATTACGGAACCCATCGAGTTGGATTTTTGTTTGCACCAGTTGTAATTACCTGGCTCCTGTGTATTAGTGCCATAGGCCTGTACAATATATTCTACTGGAATCCCCAAGTTTACCAAGCACTCTCCCCATATTACATGTACAAATTTTTGAAGAAGACCCAAAGGGGAGGTTGGATGGCCCTCGGCGGGATCCTGCTATGTATGACAGGTTCGGAAGCAATGTTTGCTGATCTCGGGCACTTCTCGCAGCTATCTATCAAGATTGCTTTCTCTTTTGTGGTTTATCCATCTTTGGTCCTGGCATACATGGGACAAGCTGCTTATCTTTCTCAACATCACAGCGTGGAAACCGACTATCGAATCGGATTTTATGTGTCTGTCCCTGAGAAAATAAGATGGCCCGTTCTTGTGATCGCCATTTTAGCCGCGGTGGTAGGAAGTCAAGCTGTCATTACCGGAACTTTCTCGATAATAAAACAGTGCTCTGCCTTAGGTTGCTTTCCGAGGGTCAAAATTGTACATACCTCCTCAAAGATCCACGGTCAGATTTATATACCGGAGATCAATTGGACGTTGATGCTCTTATGCTTGGCTATTACTGGTGGCTTTCGAGACACGAAACGAATGGGCAATGCATCAGGCTTAGCAGTTATAACTGTTATGTTGGTGACCACATGCCTAATGTCTGTAGTCATCATCTTGTGCTGGCACAAAAGTTTTCTCTTTGCCATTGCCTTCATACTTGTTTTCGGCTCCATTGAATCACTCTACTTCTCAGCATCCCTCATCAAGTTTCGAGAAGGGGCTTGGGTTCCCATCGCACTTTCGCTCATCTTCCTAATAGTCATGTACGTATGGCATTACGGAACACGCAAGAAATACGAATTCGACGTTCAAAACAAAGTTTCGATCAACTGGCTCCTTGGCCTAGGTCCCAGCTTAGGCATTGTTCGAGTACGTGGAATCGGCCTCATATACACCGAGCTTGTGACAGGAATCCCCGCCATCTTCTCCCACTTTGTAACAAACCTCCCCGCCTTCCACCAGGTCCTAGTCTTCCTCTGTGTCAAATCCGTCCCAGTCCCACACGTCAGACCTGGAGAGAGATTCCTAGTAGGAAGAGTCGGGCCAAAAGAGTATCGTCTCTACCGTTGCATAGCACGGTACGGCTACCGCGACATCCACAAGGACGACATGGAGTTCGAGAAGGACCTGATGTGCAGTATCGCAGAGTTCATCCGATCCGAGAAGCAAGAAACCAACGTCAAACTAGAAGATCTAGAAGAGAGCGAGAAAATGACAGTGGTGGGGACATCTTCAACACAAGTAGATGGAGTGAGAATGTGCGAGGATGAAGGAGAAACCGCGGAGACATCAGAGCTCAGGGAGATAAAATCTCCGCAAAAGGTGAGGAAAAGAGTGAGGTTCGTCGTACCAGAGAGCCCGCGAATGGAAGTAGAGGCAAGGAGGGAGCTTCAAGAGCTAATGGAGGCAAGAGAGGCAGGAATGGCTTTCATAATGGGGCATTCATATGTGAAGGCAAAGAGGGGATCAGGTTGGGTGAAGAAAGTGGTGATAAATTATGGGTATGATTTTTTGAGGAGGAACTCAAGAGGGCCAAGTTATGCTTGGAGTGTGCCTCATGCTTCTACTTTAGAAGTGGGGATGATCTACCAAGTTTGA 2319 46.61 MDLESAIGRHPLKKDSWRAVLTLAYQSLGVVYGDLSTSPLYVYKSTFAEDIQHSETNEEIYGVLSFVFWTLTLIPLIKYVFIVLRADDNGEGGTFALYSLLCRHARVSSLPNCQLADEELSEYTKDGVDLTTKNTCGSRLKSTLEKHRVLQRVLLVLALIGACMVIGDGVLTPAISVFSAVSGLELSMAKEHHRYIEVPVACVILVFLFAIQHYGTHRVGFLFAPVVITWLLCISAIGLYNIFYWNPQVYQALSPYYMYKFLKKTQRGGWMALGGILLCMTGSEAMFADLGHFSQLSIKIAFSFVVYPSLVLAYMGQAAYLSQHHSVETDYRIGFYVSVPEKIRWPVLVIAILAAVVGSQAVITGTFSIIKQCSALGCFPRVKIVHTSSKIHGQIYIPEINWTLMLLCLAITGGFRDTKRMGNASGLAVITVMLVTTCLMSVVIILCWHKSFLFAIAFILVFGSIESLYFSASLIKFREGAWVPIALSLIFLIVMYVWHYGTRKKYEFDVQNKVSINWLLGLGPSLGIVRVRGIGLIYTELVTGIPAIFSHFVTNLPAFHQVLVFLCVKSVPVPHVRPGERFLVGRVGPKEYRLYRCIARYGYRDIHKDDMEFEKDLMCSIAEFIRSEKQETNVKLEDLEESEKMTVVGTSSTQVDGVRMCEDEGETAETSELREIKSPQKVRKRVRFVVPESPRMEVEARRELQELMEAREAGMAFIMGHSYVKAKRGSGWVKKVVINYGYDFLRRNSRGPSYAWSVPHASTLEVGMIYQV 772
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 12004197 12010366 + MC08g1323 Mch8g1541 695162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g1541 772 Coils Coil 622 642 - -
Mch8g1541 772 Pfam K+ potassium transporter integral membrane domain 23 519 IPR053951 -
Mch8g1541 772 NCBIfam potassium uptake protein 23 772 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Mch8g1541 772 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 14 772 IPR003855 GO:0006813(PANTHER)|GO:0015079(PANTHER)|GO:0015079(InterPro)|GO:0016020(PANTHER)|GO:0016020(InterPro)|GO:0071805(InterPro)
Mch8g1541 772 Pfam K+ potassium transporter C-terminal domain 533 771 IPR053952 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch8g0003 Mch-Chr8:16589 Mch8g1541 Mch-Chr8:12004197 0 dispersed
Mch8g1338 Mch-Chr8:9828015 Mch8g1541 Mch-Chr8:12004197 2.32E-301 dispersed
Mch8g1541 Mch-Chr8:12004197 Mch9g2225 Mch-Chr9:22729277 0 dispersed
Mch4g2231 Mch-Chr4:23901843 Mch8g1541 Mch-Chr8:12004197 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g1541 K03549 - csv:101211664 1453.73