Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g1544 GTGGGAGGTCAGTTGTTGTCGTATAAAGGTCTCGAGTACAGTTCGCCGACGCTTGCTTCCGCCATTAGCAACCTCATTCCCGCTCTCACCTTCATCTTAGCTGTTCTGTTTCGGATGGAGAAACTAGCAATAAAAAGCTCAAGCAGCATAGCCAAAATCATTGGCTCGGTAGTATCCATATCAGGTGCACTAGTAGTGGTTCTTTATAAAGGTCCAGTCGTTCTATCAAACCCCTTTTCTGGGCCAACAAAATTGAATCTTCCTCCTCATCCTTTGGCCTCTTCTGAACCAAACTGGATCGGTGGCCTCTGCTTTTTTGCTCAGTACCTTCTCAACTCTTTATGGTACATTATTCTGACCCAAGCGGTGAAGATGTATCCAGATGAACTAGTTGTGGTGTGGTTGTTCTATGTTTTCGAGGCCATAATTGCTGCACCAATATGCCTATTGGCAGAGGGAAACTTGAATGCTTGGAAGCTAAAAAGCGGTCTGGAATTTGTTGCTGTTTTGAACATGGGATGTGTGGGCCAACTCTTAGTCTCTGCAATTCATACATGGGGTGTACATGTCAAAGGGCCTGTTTATGTATCAAGTTTTAGGCCACTCTCAATTGCCATTGCAGCTGCTACTGGTGTCATTTTCCTTGGGGATGATCTCTATCTTGGAAGTATTATTGGAGCAATAATAATAGCAAGTGGGTTTTACTCTATAATGTGGGGAAAAGTAAAAGAAGGAGACTTGATGGAACAGTGTGGGTTTTCAAGCTTGGAGTCTTCATCCAAAGATAAGACTCCATTGTTGCAAAGCTCTAAAGTCCAAAGTGAC 825 43.52 VGGQLLSYKGLEYSSPTLASAISNLIPALTFILAVLFRMEKLAIKSSSSIAKIIGSVVSISGALVVVLYKGPVVLSNPFSGPTKLNLPPHPLASSEPNWIGGLCFFAQYLLNSLWYIILTQAVKMYPDELVVVWLFYVFEAIIAAPICLLAEGNLNAWKLKSGLEFVAVLNMGCVGQLLVSAIHTWGVHVKGPVYVSSFRPLSIAIAAATGVIFLGDDLYLGSIIGAIIIASGFYSIMWGKVKEGDLMEQCGFSSLESSSKDKTPLLQSSKVQSD 275
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 12037432 12044761 + MC08g1326 Mch8g1544 695165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g1544 275 Pfam EamA-like transporter family 2 61 IPR000620 GO:0016020(InterPro)
Mch8g1544 275 PANTHER WAT1-RELATED PROTEIN 3 257 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Mch8g1544 275 SUPERFAMILY Multidrug resistance efflux transporter EmrE 2 69 - -
Mch8g1544 275 SUPERFAMILY Multidrug resistance efflux transporter EmrE 148 242 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch8g1544 Mch-Chr8:12037432 Mch8g1547 Mch-Chr8:12071984 3.56E-111 dispersed
Mch8g1544 Mch-Chr8:12037432 Mch8g1546 Mch-Chr8:12049630 1.18E-174 proximal
Mch4g2237 Mch-Chr4:23936295 Mch8g1544 Mch-Chr8:12037432 1.25E-56 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g1544 - - - 0.0