Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g1566 CTTACGGCGGATTACTACCGGAAATCGTGTCCGAGATTCAGCCAGATTGTCCAAGAAACCATCACCAACAAGCAGATCACGAGCCCCTCCACCGCCGCCGGAACTCTCCGCCTCTTCCTCCACGATTGCCTCCCCAACGGCTGCGACGGCTCCGTCCTAATCTCCTCCACTCCCTTCAACAGAGCCGAGCGAGACGCCGACATTAACCTCTCCCTCCCCGGCGACGCCTTCGATGTCGTCGTTCGGGCCAAGACCGCTCTCGAGCTCGAATGCCCTAACACTGTCTCCTGCGCTGACATTCTCGCGGTTGCGACTCGCGACCTCGTCACCATGGTCGGCGGACCTTACTACAACGTTATGCTCGGTCGCAGGGATGGCCGTGTGTCCAAAGCTTCGACGATTCCTGGTGCTCTTCCGTTAGCTACCTCGCCGATTCCTCGGATAATTGATATTTTCAAGGCGCGGGGGTTTACTGTGCAGGAAATGGTAGCTCTGAGTGGTGCTCATACAATCGGATTCTCGCATTGTAAAGAATTCAGCTCTCAGATCTATAACTATAGCAAGTCGTCGTCTTTTGATACGCAGTATAACCCTAGATTCGCGCAAGGATTGCAGAGAGCTTGTTCTGGTTTTGAAAAGAATCCTACCTTATCGGTTTTCAATGACATTATGACTCCCAACAAATTTGATAACTCCTACTTCCAGAATCTGCCTAAGGGATTGGGGATCTTGAAGTCTGATCATGGACTGTACAACGATTTAAGGACGAGGCCATTCGTGGAGGCGTATGCAGCGGACGAGAACAAGTTCTTCAAGGATTTTGCTCGAGCGATGGAGAAACTGAGTAATTATAAAGTTATGACGGGCTATCAAGGGGAGATTCGTCACCGGTGC 894 51.68 LTADYYRKSCPRFSQIVQETITNKQITSPSTAAGTLRLFLHDCLPNGCDGSVLISSTPFNRAERDADINLSLPGDAFDVVVRAKTALELECPNTVSCADILAVATRDLVTMVGGPYYNVMLGRRDGRVSKASTIPGALPLATSPIPRIIDIFKARGFTVQEMVALSGAHTIGFSHCKEFSSQIYNYSKSSSFDTQYNPRFAQGLQRACSGFEKNPTLSVFNDIMTPNKFDNSYFQNLPKGLGILKSDHGLYNDLRTRPFVEAYAADENKFFKDFARAMEKLSNYKVMTGYQGEIRHRC 298
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 12443056 12443949 + MC08g1336 Mch8g1566 695187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g1566 298 ProSitePatterns Peroxidases proximal heme-ligand signature. 161 171 IPR019793 -
Mch8g1566 298 PRINTS Haem peroxidase superfamily signature 32 46 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch8g1566 298 PRINTS Haem peroxidase superfamily signature 113 125 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch8g1566 298 PRINTS Haem peroxidase superfamily signature 95 112 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch8g1566 298 PRINTS Haem peroxidase superfamily signature 161 176 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch8g1566 298 PRINTS Haem peroxidase superfamily signature 222 237 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch8g1566 298 PRINTS Plant peroxidase signature 10 29 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch8g1566 298 PRINTS Plant peroxidase signature 34 54 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch8g1566 298 PRINTS Plant peroxidase signature 75 88 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch8g1566 298 PRINTS Plant peroxidase signature 94 104 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch8g1566 298 PRINTS Plant peroxidase signature 220 235 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch8g1566 298 PRINTS Plant peroxidase signature 276 289 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch8g1566 298 PRINTS Plant peroxidase signature 236 253 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch8g1566 298 PRINTS Plant peroxidase signature 160 172 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch8g1566 298 PRINTS Plant peroxidase signature 113 128 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch8g1566 298 PANTHER - 1 298 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch8g1566 298 SUPERFAMILY Heme-dependent peroxidases 1 298 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch8g1566 298 FunFam Peroxidase 139 281 - -
Mch8g1566 298 CDD secretory_peroxidase 1 298 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Mch8g1566 298 Gene3D Peroxidase, domain 2 139 281 - -
Mch8g1566 298 ProSiteProfiles Plant heme peroxidase family profile. 1 298 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch8g1566 298 Gene3D - 4 298 - -
Mch8g1566 298 FunFam Peroxidase 4 142 - -
Mch8g1566 298 Pfam Peroxidase 17 266 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch6g0177 Mch-Chr6:1189685 Mch8g1566 Mch-Chr8:12443056 1.93E-125 dispersed
Mch8g1566 Mch-Chr8:12443056 Mch9g0620 Mch-Chr9:4637878 4.71E-69 dispersed
Mch4g2246 Mch-Chr4:23988966 Mch8g1566 Mch-Chr8:12443056 3.35E-166 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g1566 K00430 - csv:101219829 565.074