Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch8g1569 | ATGGCCGCCGGCGGAGGAACAGAGGCTTTCCCCGATCTCGGCCGCCACTGCCAGCGCTCCGATTGCCACCAGCTCGATTTCCTTCCCTTCACCTGCGACGGCTGCCAAAAGGTGTTCTGTTTGGAGCATCGGGGTTTCAAATCCCACGACTGCCCTAAGTCCGATCGGAACAGCAGAAAAGTGGTGGTGTGCGAGATCTGTTCGACGTCGATCGAGACCACCGGGAAGGACGGCGGCGACGAGAGGGTCATTCTGGAAAGGCACGAGAAATCAGGGGACTGCGATCCGAGGAAGAAGAAGAAGCCGACGTGCGCGGCGAGGCGCTGCCGGGAGATTCTGACGTTTTCCAATACATGTGTGTGTAAAACCTGCCAGTTGAAGGTGTGTTTGAAGCACCGGTTCCCGGCGGAACATGGCTGTGGACGGCCGGTGAAGGCGGCGCCGGCGCCAGCGCCAGAGCCAGCGGGAGGTGAGATGCGGTGGAACGAGAAGTTTATGGCGGCTTTGGGTTTGAGGAGCGGCGGCGGTGGCGATTGTGGGAAGATTGAGCGTCCGGCGGCCAAGGCTTCTCCGAGTTCCCCATCTGTTAAAGCTTGTTGA | 600 | 60.17 | MAAGGGTEAFPDLGRHCQRSDCHQLDFLPFTCDGCQKVFCLEHRGFKSHDCPKSDRNSRKVVVCEICSTSIETTGKDGGDERVILERHEKSGDCDPRKKKKPTCAARRCREILTFSNTCVCKTCQLKVCLKHRFPAEHGCGRPVKAAPAPAPEPAGGEMRWNEKFMAALGLRSGGGGDCGKIERPAAKASPSSPSVKAC | 199 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 12495236 | 12497162 | + | MC08g1337 | Mch8g1569 | 695190 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch8g1569 | 199 | PANTHER | ARSENITE INDUCUBLE RNA ASSOCIATED PROTEIN AIP-1-RELATED | 9 | 171 | - | GO:0005737(PANTHER) | |
| Mch8g1569 | 199 | Pfam | AN1-like Zinc finger | 17 | 55 | IPR000058 | GO:0008270(InterPro) | |
| Mch8g1569 | 199 | Pfam | AN1-like Zinc finger | 104 | 142 | IPR000058 | GO:0008270(InterPro) | |
| Mch8g1569 | 199 | SMART | AN1_Zf_4 | 104 | 145 | IPR000058 | GO:0008270(InterPro) | |
| Mch8g1569 | 199 | SMART | AN1_Zf_4 | 17 | 56 | IPR000058 | GO:0008270(InterPro) | |
| Mch8g1569 | 199 | MobiDBLite | consensus disorder prediction | 180 | 199 | - | - | |
| Mch8g1569 | 199 | ProSiteProfiles | Zinc finger AN1-type profile. | 11 | 59 | IPR000058 | GO:0008270(InterPro) | |
| Mch8g1569 | 199 | ProSiteProfiles | Zinc finger AN1-type profile. | 98 | 148 | IPR000058 | GO:0008270(InterPro) | |
| Mch8g1569 | 199 | Gene3D | - | 83 | 155 | IPR035896 | - | |
| Mch8g1569 | 199 | SUPERFAMILY | AN1-like Zinc finger | 10 | 58 | IPR035896 | - | |
| Mch8g1569 | 199 | Gene3D | - | 2 | 70 | IPR035896 | - | |
| Mch8g1569 | 199 | FunFam | AN1-type zinc finger protein 2B isoform X1 | 7 | 68 | - | - | |
| Mch8g1569 | 199 | SUPERFAMILY | AN1-like Zinc finger | 64 | 148 | IPR035896 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch1g0384 | Mch-Chr1:7882326 | Mch8g1569 | Mch-Chr8:12495236 | 3.21E-45 | dispersed |
Pathway information