Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g1792 ATGGAGGACGGCCGTGCTGTGAGCAAGGCCATGCTTGATTCAGAACCATCGGGTTCGTACAGAGACATCATTACTGTTGCTACTATCGCTACGGGTATTCAGTTTGGGTGGGCCCTCCAGCTGTCGTTGCTGACGCCGTACGTCCAGCAACTCGGCGTCCCTCACCCATGGTCCTCTTTCGTCTGGCTTTGTGGGCCCATCTCAGGCCTACTGGTCCAGCCCACCGTTGGGTACTTCAGCGACCGTTGCACCTCAAGGTTCGGTCGGCGCCGCCCCTTCATCATGTCAGGGTCGGGGTTTGTAGCGGTTGCAGTTTTTCTCATTGGGTTCGCTGCGGATCTTGGGCACGCAGCGGGTGATAAGCATTCGGATCCTGTAAAATCCAGGGCGGTGGCCATATATGTGGTCGGGTTCTGGGTGTTGGACGTGGCAAACAACATGCTGCAGGGTCCTTGCAGAGCCTTCTTGGCAGATATATCCTGTAAAAGCCAGAAGAAGATGAGAGTGGCGAACGCCTTATTCTCCTTCTTCATTGGCGTAGGGAACGTTTTAGGGTACGCAGCCGGATCTTACAGCAAACTCCACAAGATCCTCCCTTTCACACTCACTAAATCCTGCGATTCTTACTGCGCAAACCTGAAATCATGTTTCTTAGTACACATTGTCCTCCTGTTGGCAGTGACCTCGGTCACAGTGTTCTCGGTGGGGGAGAAGCAGTTGGAGCCCAGAGACGACATTGGCGAAGAGTCGACACCATTTTTCGGGAAGTTGTTCTCAGCACTGAAGCAGTTGAAGAAACCGATGTGGGTGTTGCTACTGGTGACGGCCGTGAATTGGGTGGGTTGGTTCCCGTTTTTGCTGTACGACACGGACTGGATGGGCGTGGAAGTGTACGGTGGAAAGGCGAATGGGAGTCCAGAAGAAGTGAGGTACTATGACCTTGGTGTTCGGGAAGGGGCGCTTGGGTTGATGGTGAACTCCTTCGTTCTGGGTTTTGCCGCTTTGGCGATAGAGCCCGTCAGCCGCATTCTTGGAGGTCTCAAGTGGTTATGGGGAGCTGTCAACATTATATTGGCACTTGCGATGGGATCCACCGTGGTTGTCACAAAGGTGGCTCAACGTTGGAGGGCAACTCATGGGTTGACAACTCCTCCCACCAATGTCAAAGCTGGAGCCTTTTCCATCTTTGCAGTCTTGGGTATTCCACTCTCGGTGAATTATAGTGTTCCTTATGCCCTAGCGTCAATCTTTTCTTCATCCTCCAGTGCGGGTCAAGGGCTATCTTTGGGAATTCTCAACCTGTTCATAGTGCTTCCGCAAATGTTTGTTTCAGCGGTTAGTGGGCCACTTGATTCAGTTTTTGGAGGAGGAAATTTACCGGCGTTCGTAATGGGTGCACTAGCAGCTTTTGCAAGCTCGATGTGCGCCATGTTCGTACTCCCCGATCCTCCATCTCAATCTGAGGTCTCGCTAACAATGGGCGGTGGCCACTGA 1494 52.74 MEDGRAVSKAMLDSEPSGSYRDIITVATIATGIQFGWALQLSLLTPYVQQLGVPHPWSSFVWLCGPISGLLVQPTVGYFSDRCTSRFGRRRPFIMSGSGFVAVAVFLIGFAADLGHAAGDKHSDPVKSRAVAIYVVGFWVLDVANNMLQGPCRAFLADISCKSQKKMRVANALFSFFIGVGNVLGYAAGSYSKLHKILPFTLTKSCDSYCANLKSCFLVHIVLLLAVTSVTVFSVGEKQLEPRDDIGEESTPFFGKLFSALKQLKKPMWVLLLVTAVNWVGWFPFLLYDTDWMGVEVYGGKANGSPEEVRYYDLGVREGALGLMVNSFVLGFAALAIEPVSRILGGLKWLWGAVNIILALAMGSTVVVTKVAQRWRATHGLTTPPTNVKAGAFSIFAVLGIPLSVNYSVPYALASIFSSSSSAGQGLSLGILNLFIVLPQMFVSAVSGPLDSVFGGGNLPAFVMGALAAFASSMCAMFVLPDPPSQSEVSLTMGGGH 497
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 17948316 17950316 - MC08g1448 Mch8g1792 695413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g1792 497 CDD MFS_SLC45_SUC 23 478 - -
Mch8g1792 497 PANTHER SUGAR TRANSPORTER 15 479 - GO:0005773(PANTHER)|GO:0005886(PANTHER)|GO:0008506(PANTHER)|GO:0016020(PANTHER)
Mch8g1792 497 Gene3D MFS general substrate transporter like domains 19 239 IPR036259 -
Mch8g1792 497 NCBIfam sucrose/proton symporter 20 484 IPR005989 GO:0005886(InterPro)|GO:0008515(InterPro)|GO:0015770(InterPro)
Mch8g1792 497 SUPERFAMILY MFS general substrate transporter 21 485 IPR036259 -
Mch8g1792 497 Pfam MFS/sugar transport protein 37 281 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch8g0303 Mch-Chr8:2116464 Mch8g1792 Mch-Chr8:17948316 6.22E-161 dispersed
Mch8g1792 Mch-Chr8:17948316 Mch8g1852 Mch-Chr8:19356282 2.18E-135 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g1792 K15378 - csv:116401998 781.941