Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch8g1809 | GCGTGCTTGGTCTGGTCGTGGATCGCCGCCCACAGATGGAAGCAGAGGAAGAAGAAAGGCCCCAAAACGTGGCCGCTTGTGGGAGCTGCAATCGAGCAGCTGCTCAACTACCACAGAATGCACGACTGGCTTCTCGGTTACCTTAAGCTCTCCAAAACTGTTGTCGTCCCCATGCCTTTCACTACTTACACTTACATTGCCCACCCCGATAATGTTCACCACATTCTCAAGACCAACTTTGCTAATTATCCTAAGGGTGATGCATATCATTCGTACATGGAAGTGCTTCTTGGAGATGGGATATTCAACGTGGATGGAGAGCTATGGAGGAAGCAAAGGAAGACCGCCAGCTTTGAATTTGCTTCAAAGAATTTGAGGGATTTCAGTGCCTTGGTTTTCAGAGAGTACTCTCTCAAGCTCTCCTCTATTTTAACTTCGGCTTCTCTACACAACCAACAAGTTGACATGCAGGAATTGTTGATGAGAATGACTTTGGACTCCATATGCAAGGTTGGATTTGGCGTTGAAATTGGATCATTGGCTCCAAATTTGCCCGAAAATTGCTTCGCACAAGCCTTTGATACAGCAAACATCATCGTCACTCTTCGGTTCATCGATCCTTTGTGGAAAATTAAAAGATTTCTCAATTTGGGATCCGAAGCTCTCCTCGATAAGTCCATCAAAATCATCGATGATTTCACCTACTCTGTTATTGCCACTAGGAAGAAGGAGATCGAAGAAGCTCGAACCACGGGCAACGATGGCAAAAAGATAAAACACGACATATTGTCAAGATTTATAGAGTTAGGCGATGATCCGAACAACAATTTCACAAACAAGAGCCTAAGAGACGTCGTTCTAAACTTTGTGATCGCTGGACGTGACACAACCGCTGCCACTCTTTCGTGGGCCATTTATATGGTAATGACTCACTCCCATGTGGCTGACAAACTTTACTCCGAGCTCACTAGTTTTGAAGAAGCAAGAGCCAAAGAAGAAGGAATTTCATTGCTCAATCAGCATCACTCAACGGATCTTGAATCCTTTGAAAGAAGAGTGAAGCAATTTGCAGAGCTTCTCAATTACGACTCACTCGCTAGATTGCATTATTTGCATGCAATGATTACCGAGACACTTCGGCTATACCCTGCAGTCCCTCAGGACCCGAAGGGCATTTTGGAGGATGATGTGTTGCCAGATGGGACAAAGGTAAGAGCAGGAGGAATGGTGACATATGTTCCCTACTCGATGGGAAGAATGGAGTACAATTGGGGTTGTGATGCAGCTTCTTTCAACCCTGAAAGATGGCTCAAACAAGGCATTTTCCACAATGAATCCCCATTCAAGTTCACTGCTTTTCAGGCTGGACCAAGAATCTGCATGGGGAAAGACTCGGCATATCTGCAGATGAAGATGGCACTTGCGATTTTGTGCAGATTCTACAAATTTAAATTGGTGAGTGGTCATCAAGTGAAGTACAGGATGATGACAATTCTGTCCATGGCCAATGGCTTGAAAGTTACCGTTGACAGACGC | 1536 | 44.99 | ACLVWSWIAAHRWKQRKKKGPKTWPLVGAAIEQLLNYHRMHDWLLGYLKLSKTVVVPMPFTTYTYIAHPDNVHHILKTNFANYPKGDAYHSYMEVLLGDGIFNVDGELWRKQRKTASFEFASKNLRDFSALVFREYSLKLSSILTSASLHNQQVDMQELLMRMTLDSICKVGFGVEIGSLAPNLPENCFAQAFDTANIIVTLRFIDPLWKIKRFLNLGSEALLDKSIKIIDDFTYSVIATRKKEIEEARTTGNDGKKIKHDILSRFIELGDDPNNNFTNKSLRDVVLNFVIAGRDTTAATLSWAIYMVMTHSHVADKLYSELTSFEEARAKEEGISLLNQHHSTDLESFERRVKQFAELLNYDSLARLHYLHAMITETLRLYPAVPQDPKGILEDDVLPDGTKVRAGGMVTYVPYSMGRMEYNWGCDAASFNPERWLKQGIFHNESPFKFTAFQAGPRICMGKDSAYLQMKMALAILCRFYKFKLVSGHQVKYRMMTILSMANGLKVTVDRR | 512 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 18443489 | 18446600 | - | MC08g1457 | Mch8g1809 | 695430 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch8g1809 | 512 | PRINTS | E-class P450 group I signature | 372 | 390 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch8g1809 | 512 | PRINTS | E-class P450 group I signature | 460 | 483 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch8g1809 | 512 | PRINTS | E-class P450 group I signature | 301 | 327 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch8g1809 | 512 | PRINTS | E-class P450 group I signature | 450 | 460 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch8g1809 | 512 | PRINTS | E-class P450 group I signature | 281 | 298 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch8g1809 | 512 | PANTHER | CYTOCHROME P450 | 12 | 505 | - | - | |
| Mch8g1809 | 512 | PRINTS | P450 superfamily signature | 292 | 309 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch8g1809 | 512 | PRINTS | P450 superfamily signature | 460 | 471 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch8g1809 | 512 | PRINTS | P450 superfamily signature | 373 | 384 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch8g1809 | 512 | PRINTS | P450 superfamily signature | 451 | 460 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch8g1809 | 512 | CDD | CYP86A | 52 | 505 | - | - | |
| Mch8g1809 | 512 | SUPERFAMILY | Cytochrome P450 | 11 | 512 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch8g1809 | 512 | Gene3D | Cytochrome P450 | 3 | 512 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch8g1809 | 512 | Pfam | Cytochrome P450 | 20 | 506 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch8g1809 | 512 | FunFam | Alkane hydroxylase MAH1 | 14 | 512 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch5g0332 | Mch-Chr5:2254719 | Mch8g1809 | Mch-Chr8:18443489 | 3.56E-122 | dispersed | |
| Mch5g0335 | Mch-Chr5:2308973 | Mch8g1809 | Mch-Chr8:18443489 | 3.21E-126 | dispersed | |
| Mch8g1403 | Mch-Chr8:10441553 | Mch8g1809 | Mch-Chr8:18443489 | 8.40E-35 | dispersed | |
| Mch8g1809 | Mch-Chr8:18443489 | Mch9g0600 | Mch-Chr9:4444344 | 7.74E-112 | dispersed | |
| Mch8g1809 | Mch-Chr8:18443489 | Mch6g0068 | Mch-Chr6:397319 | 6.84E-96 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mch8g1809 | K20495 | - | csv:101222076 | 879.011 |