Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g2030 CCTCCCCCACCAGCACCCCTGCAAGCTAGAAAAAGGAGACCTCCACCACCTCCACCTGCAATGGCAGGGGGAAATCCAGGACAATCTTTAGTAGGTAATGATCAGGCTAGATTGAAGCCATTGCATTGGGATAAGGTTAATACCAATGTAGATCACGCAATGGTGTGGGACAAGATTGATGGCGGTTCTTTCAGGTTTAATGGCGACCTTATGGAAGCTCTGTTCGGGTACGTGGCCACAAACAAGAAATCACCACCAAAGCGCTGTACCAAGCGTAAGCAAAAAGAATCAACAAGCCACAACAAAGGCGGACGAGCACAAATCTCCATTCTCGATTCCAGAAGGTCGAGAAACATTGCAATAATTCTTAAATCCCTAACCATTTCTCGACAAGAACTCCTTGATGCTCTCATGGAGGGACGGGGGCTCGATCCAGACACACTCGAGAAGCTTGTCAGGATCACTCCGAACCAAGAACAACAATCCCAAATCCTCGAATTCGATGGCGACCCATTAAGGCTTGGCGATGCAGAATCTTTCATTTTCCATCTTCTCAAGGCTGTTCCAACAGCCTTCACTCGTCTAAACGCCATGCTTTTCAGATCAAACTTCAAGTCAGAGCTCATGCGTATCAGGGACTTTTTACAAACACTTAGCGTGGGTTGCGAAGAGCTAAAGAGAAAGGGGCTTTTTACCAAACTGTTAGAAGCAACTCTCAAATCTGGGAATCGATTGAATTCAGGAACCACAAGAGGAGACGCACAGGCTTTCAATCTCAATTCACTATTAAAACTCTCAGATGTGAAGATCACAGACGGAAAAACCACATTGCTTCACTTCGTCGTGGAAGAAGTCATCAGATCCGAAGGGAAGAAGCAATTCTCAAACTCAAATTCAAAGAATCACATATCGGGAAAGGAAAGGGAGAATGAATACACCTTACTTGGATTATCGGCGCTAGAATCCCTCACCTGGGAGCTCTCCAATGTCAAGAAAGCATCCACAATCGACTACAAAACCTTCATTGCCAGTTGCCCTACTCTCTCGATCCACATTTCAGAAATACGAAAGCTTCTGTCGAACGAAGGAGGTGAATATAAGAGCAACATGATGCATTTTGTCAAATCCGCTGAAGAAGAAATAGAGACGGCGAGGAAAGAACAAACAAGGGTGCTGGAGATTGTGAAGAAGACGAATGAATACTATGAAACAGGGGATAGAGAAAATCCACTAGGGTTATTTGTGATAGTAAATGATTTCGTAGGCATGGTGAATCAGGTGTGTACAGAGATTGGTCGGAATTTAAGGGGGAAGAGTAACGAAATGAATTTAGATCCATGTCCGCCATTGAAGAGCTCTGCGAGCTTGAAGTTTCCACGTTTGGCGGATGATTTCATGTGTAGCATTTCAAGCGATTCTACAGATGATGGCTTC 1434 44.7 PPPPAPLQARKRRPPPPPPAMAGGNPGQSLVGNDQARLKPLHWDKVNTNVDHAMVWDKIDGGSFRFNGDLMEALFGYVATNKKSPPKRCTKRKQKESTSHNKGGRAQISILDSRRSRNIAIILKSLTISRQELLDALMEGRGLDPDTLEKLVRITPNQEQQSQILEFDGDPLRLGDAESFIFHLLKAVPTAFTRLNAMLFRSNFKSELMRIRDFLQTLSVGCEELKRKGLFTKLLEATLKSGNRLNSGTTRGDAQAFNLNSLLKLSDVKITDGKTTLLHFVVEEVIRSEGKKQFSNSNSKNHISGKERENEYTLLGLSALESLTWELSNVKKASTIDYKTFIASCPTLSIHISEIRKLLSNEGGEYKSNMMHFVKSAEEEIETARKEQTRVLEIVKKTNEYYETGDRENPLGLFVIVNDFVGMVNQVCTEIGRNLRGKSNEMNLDPCPPLKSSASLKFPRLADDFMCSISSDSTDDGF 478
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 22748501 22750028 - MC08g1566 Mch8g2030 695651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g2030 478 MobiDBLite consensus disorder prediction 82 106 - -
Mch8g2030 478 MobiDBLite consensus disorder prediction 1 33 - -
Mch8g2030 478 Coils Coil 374 394 - -
Mch8g2030 478 Gene3D Formin, FH2 domain 31 434 IPR042201 -
Mch8g2030 478 PANTHER FORMIN-RELATED 2 448 IPR027643 GO:0003779(InterPro)|GO:0030036(InterPro)|GO:0045010(InterPro)|GO:0051015(InterPro)
Mch8g2030 478 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1 434 - -
Mch8g2030 478 MobiDBLite consensus disorder prediction 1 23 - -
Mch8g2030 478 SMART it6_source 28 439 IPR015425 -
Mch8g2030 478 Pfam Formin Homology 2 Domain 34 424 IPR015425 -
Mch8g2030 478 ProSiteProfiles Formin homology-2 (FH2) domain profile. 28 450 IPR015425 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch8g2030 Mch-Chr8:22748501 Mch9g2201 Mch-Chr9:22560713 3.03E-144 dispersed
Mch8g2030 Mch-Chr8:22748501 Mch11g1148 Mch-Chr11:8056654 4.59E-84 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g2030 K28090 - csv:101217450 704.516