Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g2045 ATGAGTTGCTTTTCTTGTATTAATCCTCGAACTACAGACGGTAGCCGGGTCGAAATTGATAATGGTGTTCGAATTGATTCCGATAATGGCGTTCGAATTGATTCCGGGTGTTCTGTTAATTCCTCAGGTTCAGGTTCGGGTTCAGGGAGGGGAAAAGAAGCGCCTCGGAACAACAGTGGAATCACTCCGAAGGGTGAGCGAGCTCGTAGTTTCACGTTCCGTGAACTCGCCACAGCCACAAGAGGTTTCAAGGAAGTGAATTTGCTTGGAGAGGGTGGTTTTGGACGCGTTTACAAAGGACGTCTGGAAACAGGAGAAATTGTTGCAGTTAAACAGCTTAATCGTGAAGGGCTTCAGGGTTTTCAGGAATTCATTGTGGAGGTTCTCATGTTAAGCTTGTTACACCATCCCAATCTCGTCACCTTGACTGGTTACTGCACTGATGGAGATCAAAGGCTTTTGGTTTATGAGTACATGCCTATGGGAAGCCTTGAAGATCATCTTTTTGATTTGGGTCCTGACGTAGAGCCACTGAGTTGGAATACAAGGATTAAGATTGCAGTTTCTGCTGCCCGAGGCCTTGAGTATCTCCACTGTAGAGCAAATCCTCCAGTCATATACCGTGACTTGAAATCAGCAAATATCTTACTGGACAATGACTTTAATCCAAAGCTTTCAGATTTTGGACTAGCTAAACTGGGACCTGTTGGTGACAATACTCACGTTTCAACCAGAGTAATGGGAACATATGGATATTGTGCTCCAGAGTACGCCATGAGTGGCAAATTAACCCTTAAATCTGATATTTACAGCTTTGGTGTGGTTCTGCTTGAGATTATTACAGGGCGCAAGGCAATTGATATGACAAGGAAACCAGGGGAGCAGAATTTAGTTGTTTGGGTTATGGGCTGGGCCGGGCCGTTACTGACGAGCAAGAAAAAGATAAAGAAACTAATGGACCCGAGGCTGGGGGAGGACTACTCGCCCAAAGGAGCGTGGGCTGCAGCCGAATTGGCGTTAAAATGTTTGCAATCTGACCCTAGAAAGCGGCCTTCCATGGAAGAAGTTCTGGAGAATCTAGAAAAAGTCAGTACCTACAGAGACAGACCCAAGGAGCCC 1119 45.93 MSCFSCINPRTTDGSRVEIDNGVRIDSDNGVRIDSGCSVNSSGSGSGSGRGKEAPRNNSGITPKGERARSFTFRELATATRGFKEVNLLGEGGFGRVYKGRLETGEIVAVKQLNREGLQGFQEFIVEVLMLSLLHHPNLVTLTGYCTDGDQRLLVYEYMPMGSLEDHLFDLGPDVEPLSWNTRIKIAVSAARGLEYLHCRANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLEIITGRKAIDMTRKPGEQNLVVWVMGWAGPLLTSKKKIKKLMDPRLGEDYSPKGAWAAAELALKCLQSDPRKRPSMEEVLENLEKVSTYRDRPKEP 373
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 23342933 23378468 + MC08g1578 Mch8g2045 695666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g2045 373 CDD STKc_IRAK 89 362 - -
Mch8g2045 373 PIRSF ILK 42 371 - -
Mch8g2045 373 FunFam Serine/threonine-protein kinase PBS1 159 373 - -
Mch8g2045 373 Gene3D Transferase(Phosphotransferase) domain 1 159 371 - -
Mch8g2045 373 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch8g2045 373 SMART serkin_6 83 364 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g2045 373 MobiDBLite consensus disorder prediction 35 65 - -
Mch8g2045 373 MobiDBLite consensus disorder prediction 35 55 - -
Mch8g2045 373 ProSiteProfiles Protein kinase domain profile. 83 363 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g2045 373 Pfam Protein kinase domain 84 358 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g2045 373 SUPERFAMILY Protein kinase-like (PK-like) 62 361 IPR011009 -
Mch8g2045 373 PANTHER OS07G0668900 PROTEIN 64 365 - -
Mch8g2045 373 FunFam probable serine/threonine-protein kinase RLCKVII 55 158 - -
Mch8g2045 373 Gene3D Phosphorylase Kinase; domain 1 56 158 - -
Mch8g2045 373 ProSitePatterns Protein kinases ATP-binding region signature. 89 111 IPR017441 GO:0005524(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0054 Mch-Chr11:338613 Mch8g2045 Mch-Chr8:23342933 1.98E-164 dispersed
Mch5g1135 Mch-Chr5:10013589 Mch8g2045 Mch-Chr8:23342933 3.26E-93 dispersed
Mch8g2045 Mch-Chr8:23342933 Mch9g1622 Mch-Chr9:18385833 6.50E-138 dispersed
Mch8g2045 Mch-Chr8:23342933 Mch8g2046 Mch-Chr8:23390728 2.35E-101 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77617 PF00069 Pkinase 3.50E-50 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g2045 - - - 0.0