Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g2084 ATGTCTCGCCAAGTTCCGACGACTGCGTTCCACAAGTCCAAGACGCTTGATAATAAATATATGCTTGGAGATGAGATTGGAAAAGGAGCATATGGGCGAGTTTATAAGGGTCTGGATTTGGAGAATGGGGACTTTGTTGCTATCAAACAAGTTTCCTTGGAGAATATTGCTCAAGAGGATCTCAACATTATCATGCAAGAGATTGACTTACTGAAGAATTTGAACCACAAAAACATTGTGAAGTATCTTGGATCTCTAAAAACAAAGACTCACCTTCACATAATACTCGAGTATGTGGAGAACGGATCACTTGCCAACATTATCAAGCCAAATAAATTTGGACCTTTTCCAGAATCATTGGTTGCTGTTTACATTTCTCAGGTTTTGGAAGGCTTGGTTTATCTACATGAGCAGGGTGTAATTCATCGGGATATCAAGGGTGCAAACATACTGACCACTAAAGAGGCAAGTTATTGCTATATTTACAAGCAGGGTCTTGTGAAGCTTGCTGATTTTGGTGTTGCAACGAAATTAACGGAGGCTGATGTCAATACGCATTCAGTCGTTGGAACACCTTATTGGATGGCTCCTGAGGTAATTGAAATGTCAGGAGTTTGTGCTGCTTCCGACATATGGAGTGTTGGCTGTACTGTGATTGAACTACTTACATGTGTACCTCCGTATTATGATCTACAGCCTATGCCTGCTCTTTTTCGCATTGTACAGGACAAGCATCCTCCAATTCCAGATAGCTTATCACCAGACATCACTGATTTCCTGCGCCAGTGCTTTAAGAAGGATGCTAGGCAAAGACCTGATGCGAAAACTTTGCTTTCTCATCCTTGGATACAGAACTGTCGACGGGCTTTGCAGTCTTCTCTTCGTCATAGTGGCACATTGAGAAACATTCAAGAAGATGGGTCGACAGAAGCAGAAATTTCTAATGGAGATAATCAGAACTCTCGTGAAAGCTCTTCGGTGGAGAAAAATGAAGTTGCTGATTCTGTGAGAGCTGATTCCAGGAAGGAGTTGTCATCAGATGTTGCCATTGATGCAAGCAAGTCCCAGAAAAATTTTGCTTCAGGTCCTAATTTTGTTGAGGAAAGAGAAAGCTTAGAAGAAGATACCCTACTGGATCAAGTTCCCACCTTATCCATTCATGAAAATTCATCTCTTCTGACTGGTTCTGGCAGACTTGCTACCTCTACGCCAATTGAATTTGACGAATCTCAAAATAGAGTCCGTGAAGAAGTGGTTATGAATGCTGAAGTGCCGCCCCCAGAATTAAGGAAAGATGTTTCTAGAAAACATGGAGAGAAAGAAACTTCTACATCTGGAAGTAGACCATTCGGTTTTGGACCTGAAAGTCAAGATAATAATTTTCAAAAGGCTTCAAAGATGTCGATTGCTTTGGGAGGAGGAAACGAACTGAGTAAATTTAGTGACACTCCTGGAGATGCGTCCTTGGATGATTTATTTCAACCTCTAGATAAACTCCCTGGTGATCAAGCTGCAGAGGCATCAACATCTGTATCTACCCCACAGTCAAACGTAGGTAATATGCCAGTGAATGATGTTGGGAAAAATGACCTGGCCACAAAGTTGAGGGCTACGATTGCTCAGAAACAAATGGAAAATGAAATGGGACAGGCAAATGGTGGGGGTGACCTGCTTCGACTAGTGATGGGTGTTTTAAAGGATGATGATATTGATATTGATGGTCTGGTTTTTGATGAGAAGTTGCCCGGAGAAAATCTTTTCCCCTTGCAGGCTGTTGAGTTCAGCAGATTAGTTGGGTCATTGAGACCTGATGAACCTGAAGATATAATTGTATCCACCTGTCAAAAACTGATTGCTTTCTTTCATCAAAGACCTGAGCAGAAAATTGTTTATGTTACACAGCATGGTCTGCTCCCTTTAACAGAGTTGCTTGAAGTTCCTAAAACACGTGTTATATGTTCCGTGCTCCAGCTTATAAATCAGATAGTTAAGGATAACAGCGACTTCCAAGAAAATGCCTGTCTTGTTGGTCTAATTCCTCTGGTAATGGGCTTTGCGGTTCCTGATCGTCCTCGAGAAGTTCGTATGGAAGCAGCTTCTTTCTTACAGCAGCTTTGTCAATCAAGCTCTTTGACATTGCAAATGTTCGTTGCATGCCGTGGAATACCTGTTTTAGTAGGCTTTTTAGAGGCTGATTATGCGAAGTACAGGGAAATGGTTCACCTAGCTATTGATGGAATGTGGCAGATCTTTAAGCTCCAGCGTTCCACCCCTAGAAATGATTTCTGCCGTATAGCAGCAAAAAATGGAATTCTGCTTAGGCTCATCAACACCCTCTACAGCTTGAATGAGGCAACTCGCTTAGCTTCCATTACAGTTGGGGCTGGATATCCAGTTGATGGCTTAACTCAACGGCCACGTTCAGGTCAACTAGATTCTAGCCACCCTATATTCACTCAGTATGAGGCCTCATTTCCTGCACCTGATCAGCCTGATATTTTGAAGGTCAGGCATGGAATAGTTGATCATCACCCATCTACTGGAACACCAGAACCTTCTAGGGCTTCAACTTCACATTCTCAAAGATCAGATGCCAATCAATCCGATCATCGACACTTTTCCATGGATGCTGATAGGCCTCAATCCAGCAATACCTTAAATGAAGCTTTGGGAACTCCTAAATCGTCAGACCTAGTATCATTAGAAAAAGTTGTAAATTTAGCAACCAAGGACCCGTCTAACAGGACTTCCACAGATAGGGCTCCAAAATTGGTGGAACCTGTGTCTAATGGATTTCCTACATCATTGGCTACTCAGCAAGAGCAAGTTCGGCCCCTTTTAAGTCTGTTGGACAAAGAACCTCCCTCTCGACATCTTTCCGGTCAGCTTGAGTACATGCGCCACCTTTCTGGGTTGGAGAGACATGAAACTATAATGCCTCTATTGCATGCATCTAATGAAAAGAAGACAAATAGCGAGCCTGATTTTTTAATGGCAGAATTCGCTGATGTTTCTCAACGTGGAAAAGACAATGCAAATCTTGACTCCACTTCTAAGGTTTCTCATAAAACGGTGACAAAGAAGGTAGGACCTCAGGTATTGAATGAAGGAGCTGCCTCCACATCTGGAATTGCTTCACAGACAGCATCTGGGGTACTTTCTGGTTCAGGCGTTTTAAATGCTAGACCAGGGAGTGCAACATCCTCTGGACTTCTTTCGCACATGGTTTCAACTCTGAACGCTGATGTTGCAAAGGAATACCTGGCAAAGGTGGCAGATCTTCTGCTTGAGTTTGCTCAGGCAGATACAACTGTGAAGTCATATATGTGTAGCCAAAGCTTGCTTAGTCGCCTTTTCCAGATGTTCAATAGGGTAGAACCCCCAATTCTCTTGAAGATACTGAAGTGTGTAAATCATCTATCAACAGATCCAAACTGCTTAGAAAATCTTCAGCGAGCAGATGCAATTAAATATTTGATCCCGAACCTTGAACTCAAAGAAGGGTCTCTGGTATCACAAATACATACTGAGGTCCTCAGTGCACTATTCAATTTGTGCAAGATAAATAAGAGGAGACAAGAACATGCAGCTGAAAATGGAATTATTCCACACTTAATGCATTTTATAATTTCAGACTCTCCTCTGAAACAATATGCATTGCCTCTACTGTGTGATATGGCCCATGCATCTCGTAATTCTAGGGAGCAGTTAAGAGCCCACGGTGGGTTGGATGTATATTTGAGCCTTCTTGAGGATGAGCTGTGGTCTGTCACAGCATTGGATTCCATTGCTGTTTGCTTGGCTCATGACAATGACAACCGAAAAGTTGAACAAGCTTTGCTGAAAAAGGATGCAGTTCAGAAATTGGTTAAGTTTTTCCAGTGCTGCCCAGAACAACATTTTGTGCATATATTGGAGCCTTTCTTGAAAATTATCACAAAATCGTCCCGAATAAATACGACATTGGCTGTCAATGGTTTGACACCATTGCTTATAGCAAGGCTGGATCATCAGGATGCAATTGCTCGGCTTAATCTGCTTAAACTGATAAAGGCTGTATATGAGCATCATCCACGACCCAAGCAATTGATTGTGGAGAATGATTTACCTCATAAACTTCAGAATTTGATTGAGGAACGCAGAGACGGGCAACGGTCTGGCGGGCAAGTGTTGGTGAAGCAAATGGCTACATCTCTGCTTAAAGCACTTCACATTAACACCGTTTTGTAA 4230 42.34 MSRQVPTTAFHKSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLGSLKTKTHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYISQVLEGLVYLHEQGVIHRDIKGANILTTKEASYCYIYKQGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYDLQPMPALFRIVQDKHPPIPDSLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQNCRRALQSSLRHSGTLRNIQEDGSTEAEISNGDNQNSRESSSVEKNEVADSVRADSRKELSSDVAIDASKSQKNFASGPNFVEERESLEEDTLLDQVPTLSIHENSSLLTGSGRLATSTPIEFDESQNRVREEVVMNAEVPPPELRKDVSRKHGEKETSTSGSRPFGFGPESQDNNFQKASKMSIALGGGNELSKFSDTPGDASLDDLFQPLDKLPGDQAAEASTSVSTPQSNVGNMPVNDVGKNDLATKLRATIAQKQMENEMGQANGGGDLLRLVMGVLKDDDIDIDGLVFDEKLPGENLFPLQAVEFSRLVGSLRPDEPEDIIVSTCQKLIAFFHQRPEQKIVYVTQHGLLPLTELLEVPKTRVICSVLQLINQIVKDNSDFQENACLVGLIPLVMGFAVPDRPREVRMEAASFLQQLCQSSSLTLQMFVACRGIPVLVGFLEADYAKYREMVHLAIDGMWQIFKLQRSTPRNDFCRIAAKNGILLRLINTLYSLNEATRLASITVGAGYPVDGLTQRPRSGQLDSSHPIFTQYEASFPAPDQPDILKVRHGIVDHHPSTGTPEPSRASTSHSQRSDANQSDHRHFSMDADRPQSSNTLNEALGTPKSSDLVSLEKVVNLATKDPSNRTSTDRAPKLVEPVSNGFPTSLATQQEQVRPLLSLLDKEPPSRHLSGQLEYMRHLSGLERHETIMPLLHASNEKKTNSEPDFLMAEFADVSQRGKDNANLDSTSKVSHKTVTKKVGPQVLNEGAASTSGIASQTASGVLSGSGVLNARPGSATSSGLLSHMVSTLNADVAKEYLAKVADLLLEFAQADTTVKSYMCSQSLLSRLFQMFNRVEPPILLKILKCVNHLSTDPNCLENLQRADAIKYLIPNLELKEGSLVSQIHTEVLSALFNLCKINKRRQEHAAENGIIPHLMHFIISDSPLKQYALPLLCDMAHASRNSREQLRAHGGLDVYLSLLEDELWSVTALDSIAVCLAHDNDNRKVEQALLKKDAVQKLVKFFQCCPEQHFVHILEPFLKIITKSSRINTTLAVNGLTPLLIARLDHQDAIARLNLLKLIKAVYEHHPRPKQLIVENDLPHKLQNLIEERRDGQRSGGQVLVKQMATSLLKALHINTVL 1409
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 23835410 23852715 - MC08g1608 Mch8g2084 695705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g2084 1409 MobiDBLite consensus disorder prediction 403 460 - -
Mch8g2084 1409 MobiDBLite consensus disorder prediction 849 863 - -
Mch8g2084 1409 SMART serkin_6 20 283 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g2084 1409 MobiDBLite consensus disorder prediction 505 523 - -
Mch8g2084 1409 CDD STKc_Cdc7_like 19 283 - -
Mch8g2084 1409 Gene3D - 585 793 IPR011989 -
Mch8g2084 1409 MobiDBLite consensus disorder prediction 878 894 - -
Mch8g2084 1409 PANTHER ARMADILLO REPEAT-CONTAINING PROTEIN 3 605 1409 IPR052441 -
Mch8g2084 1409 PRINTS Tyrosine kinase catalytic domain signature 96 109 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch8g2084 1409 PRINTS Tyrosine kinase catalytic domain signature 252 274 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch8g2084 1409 PRINTS Tyrosine kinase catalytic domain signature 209 231 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch8g2084 1409 PRINTS Tyrosine kinase catalytic domain signature 134 152 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch8g2084 1409 ProSiteProfiles Protein kinase domain profile. 20 283 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g2084 1409 FunFam MAP3K epsilon protein kinase 1 586 794 - -
Mch8g2084 1409 FunFam MAP3K epsilon protein kinase 1-like 1058 1404 - -
Mch8g2084 1409 MobiDBLite consensus disorder prediction 444 460 - -
Mch8g2084 1409 ProSitePatterns Protein kinases ATP-binding region signature. 26 49 IPR017441 GO:0005524(InterPro)
Mch8g2084 1409 MobiDBLite consensus disorder prediction 302 349 - -
Mch8g2084 1409 SUPERFAMILY ARM repeat 597 1294 IPR016024 -
Mch8g2084 1409 MobiDBLite consensus disorder prediction 475 527 - -
Mch8g2084 1409 MobiDBLite consensus disorder prediction 841 897 - -
Mch8g2084 1409 Gene3D - 1057 1404 IPR011989 -
Mch8g2084 1409 MobiDBLite consensus disorder prediction 909 932 - -
Mch8g2084 1409 Gene3D Transferase(Phosphotransferase) domain 1 17 327 - -
Mch8g2084 1409 MobiDBLite consensus disorder prediction 428 443 - -
Mch8g2084 1409 MobiDBLite consensus disorder prediction 302 326 - -
Mch8g2084 1409 SMART arm_5 1189 1228 IPR000225 GO:0005515(InterPro)
Mch8g2084 1409 SMART arm_5 624 664 IPR000225 GO:0005515(InterPro)
Mch8g2084 1409 SMART arm_5 1143 1187 IPR000225 GO:0005515(InterPro)
Mch8g2084 1409 SMART arm_5 709 752 IPR000225 GO:0005515(InterPro)
Mch8g2084 1409 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch8g2084 1409 FunFam MAP3K epsilon protein kinase 1 17 315 - -
Mch8g2084 1409 Pfam Protein kinase domain 20 283 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g2084 1409 SUPERFAMILY Protein kinase-like (PK-like) 17 284 IPR011009 -
Mch8g2084 1409 MobiDBLite consensus disorder prediction 327 348 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch4g1741 Mch-Chr4:20515992 Mch8g2084 Mch-Chr8:23835410 1.90E-15 dispersed
Mch8g2084 Mch-Chr8:23835410 Mch8g2856 Mch-Chr8:31430138 2.78E-63 dispersed
Mch9g0766 Mch-Chr9:5724608 Mch8g2084 Mch-Chr8:23835410 1.41E-12 dispersed
Mch8g2084 Mch-Chr8:23835410 Mch7g1086 Mch-Chr7:14888068 5.78E-66 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77620 PF00069 Pkinase 7.20E-71 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g2084 - - - 0.0