Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g2096 ATGAGCTGCTTTAGCTGCTGTGAGGAAGATGAAATTCAGAAAGCAGCTGAGAATGGAGGCATCTATGCAGCAAAAAATACAACAGGAAATAATGAAGGTTATCAGAAATCTGAAGCTGCACCAGCAGTCACTCGAGCAGTGAAAATGCAACCAATATTAGTACCTACCATCCCTGTGGATGAACTATCGGAAGTAACAGACAATTTTGGAAATGAAGCTTTGATTGGAGAGGGGTCGTACGGGAGAGTATACTATGGTGTACTTAAAAGCGGGCAGCCTGCTGCAATCAAGAAGTTAGATACCAGCAAACAGCCTGATGACGAGTTTTTAGCACAGGTTTCCATGGTCTCAAGGCTGAAGCATGAAAATTTTGTTCAATTGCTTGGTTATTGCATTGATGGGAATTCCCGTATACTAGCTTATGAGTTCGCATCTAATGGATCACTTCATGATATTCTTCATGGAAGAAAAGGAGTGAAAGGAGCGCAGCCTGGTCCCGTGCTATCATGGGCGCAACGTGTGAAAATTGCTGTAGGGGCTGCTAGAGGACTTGAGTATTTGCATGAAAAGTCTGATTCCCACATTATTCATCGCGATATTAAGTCCAGCAATGTGCTAATCTTTGATGATGATGTTGCTAAAATTGCTGACTTTGATCTGTCCAATCAAGCTCCTGATATGGCTGCTCGCCTTCATTCTACACGTGTCCTTGGAACTTTTGGCTATCATGCTCCTGAATATGCCATGACTGGTCAATTGAATGCCAAGAGCGACGTATACAGCTTCGGCGTAGTCTTGCTTGAACTTTTGACAGGGAGAAAACCTGTAGATCCTACGCTGCCACGAGGACAACAAAGTCTCGTTACTTGGGCTACACCAAAACTGAGTGAAGATAAAGTTAGGCAATGTGTCGATGGAAGGCTTGGTGGAGAGTACCCCCCAAAGGCAGTAGCAAAGTTGGCCGCTGTTGCCGCCTTGTGTGTGCAGTACGAGGCAGATTTCCGGCCAAACATGAGCATTGTTGTCAAAGCCCTTCAGCATCTGTTAAATGCCCGACCTGGTCCTTCTGGCGACGCATCAAACTCGTGA 1089 45.27 MSCFSCCEEDEIQKAAENGGIYAAKNTTGNNEGYQKSEAAPAVTRAVKMQPILVPTIPVDELSEVTDNFGNEALIGEGSYGRVYYGVLKSGQPAAIKKLDTSKQPDDEFLAQVSMVSRLKHENFVQLLGYCIDGNSRILAYEFASNGSLHDILHGRKGVKGAQPGPVLSWAQRVKIAVGAARGLEYLHEKSDSHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDPTLPRGQQSLVTWATPKLSEDKVRQCVDGRLGGEYPPKAVAKLAAVAALCVQYEADFRPNMSIVVKALQHLLNARPGPSGDASNS 362
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 23979286 23983639 - MC08g1616 Mch8g2096 695717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g2096 362 ProSitePatterns Serine/Threonine protein kinases active-site signature. 195 207 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch8g2096 362 Pfam Protein tyrosine and serine/threonine kinase 74 345 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch8g2096 362 FunFam pto-interacting protein 1 145 356 - -
Mch8g2096 362 CDD STKc_IRAK 75 348 - -
Mch8g2096 362 ProSiteProfiles Protein kinase domain profile. 69 349 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g2096 362 Gene3D Phosphorylase Kinase; domain 1 29 143 - -
Mch8g2096 362 SUPERFAMILY Protein kinase-like (PK-like) 50 345 IPR011009 -
Mch8g2096 362 ProSitePatterns Protein kinases ATP-binding region signature. 75 98 IPR017441 GO:0005524(InterPro)
Mch8g2096 362 SMART serkin_6 69 349 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g2096 362 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 3 351 IPR052101 -
Mch8g2096 362 FunFam PTI1-like tyrosine-protein kinase 3 33 143 - -
Mch8g2096 362 Gene3D Transferase(Phosphotransferase) domain 1 144 354 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch8g2096 Mch-Chr8:23979286 Mch8g2131 Mch-Chr8:24431334 1.36E-88 dispersed
Mch5g0902 Mch-Chr5:6639490 Mch8g2096 Mch-Chr8:23979286 3.63E-170 transposed
Mch5g1458 Mch-Chr5:15649284 Mch8g2096 Mch-Chr8:23979286 1.64E-168 transposed
Mch7g0189 Mch-Chr7:2338368 Mch8g2096 Mch-Chr8:23979286 3.74E-172 transposed
Mch2g0405 Mch-Chr2:2955716 Mch8g2096 Mch-Chr8:23979286 2.79E-53 wgd
Mch8g2096 Mch-Chr8:23979286 Mch9g0612 Mch-Chr9:4570580 2.01E-216 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77621 PF07714 PK_Tyr_Ser-Thr 4.90E-46 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g2096 K13436 - csv:101223136 676.011