Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g2099 ATGGAGGCTGGATATGAAGGTGAAGCTTGTCAATTGTACGGCGTGGGTTCTATGGACTTGAGGGCTGCTGTTGGGAAGCGGAGTCTGGAATGGGATTTGAATGATTGGAAATGGGATGGAGATCTCTTTATTGCTAGGCCTTTAAATACGATGGAATCTGATCATTTGAGTAGGCAACTTTTTCCAATCGTCTCTGGGATTCCCCTGACCGGAGGTTCTTCGAACAGTTCCTCGTCATGTTCTGATGAAGCTAATATGGGGATTGAGAAAGGGAAAAGGGAAGTGGAGAAGAGAAGGAGGGTTACTGTTATGGAAGATGAGAATCTTAATGATGAAGCACGTGCTTTGAGTTTAAAGGTCGGCGGAAATGGTTCTCAGATTGCTGAGAGAGAAGCAGGGAATTGGGAAGGAACCAGTGGGAAGAAGACTAAGTTGTCTGGTGGAAATTCGAATCGTGCAGTTTGCCAGGTAGAGGACTGTGGAGCAGATCTGAGCAATGCTAAAGATTATCACAGACGGCATAAAGTCTGCGAAATGCATTCTAAGGCAAGTAGGGCGCTTGTCGCTAACGTCATGCAGCGATTCTGTCAGCAATGTAGCAGGTTTCATGTTCTTCAAGAGTTTGATGAAGGGAAGCGAAGTTGTCGTAGGCGTTTGGCTGGCCATAATAAGCGCAGAAGAAAAATTAATCCAGATAATGTTGTTAATGGAAATTCCCCTCCTGATGAGCAGACTAGTAGTTATTTACTAATAACTCTATTACGAATACTTGCAAATTTGCACTCCAATGGATCAAATCAGACCACAGATCAGGATCTTCTTGCTCATCTTATAAGAAGCCTTGCCTGTCAATCTAGCGAGCATGGGGGAAAGAACCTATCTGGGATTCTTCATGATCCCCAGAATTTGCTGAACAATGGAGCATTAATTGGTAAATCAGACCTAGTTTCTACTTTTCTCTCAAATGGTCCTCAGGTACCTTTGAGACCTTCTAAACAACACGACACAGTACCAATATCTGAGAAACCGGTACAAGCCATTGCAAGGGGTGGAGATACACCAGCCATATCTTCTATAAAACCAAGCACTTCGAACAGCCCTCCAGCTTATTCAGAAATCAGGAACAGTACAGTTGGGCAATGCAAAATGATGAACTTTGATTTGAATGATGCTTATGTTGACTCAGACGATGGCATGGAAGATATTGAGAGACCAGCACTCCCTGCGCACATGGGAACAAGTTCTCTTGAATGTCCTTCTTGGGTGCAACAAGACTCTCATCAGTCAAGTCCCCCTCAAACTAGTGGAAATTCAGATTCAGCATCTGCTCAGTCGCCTTCTAGCTCTGCTGGAGACGCTCAGAGCCGCACAGATCGCATAATTTTGAAATTGTTTGGGAAAGCTCCAAATGATTTTCCTCACGTTTTACGAGCTCAGGTTCTTGATTGGCTATCACACAGTCCCACGGAGATAGAGAGCTATATCAGGCCTGGTTGTGTTATTCTAACGATATACTTACGTCAGACCGAGGCTGCTTGGGATGATCTTTGCCATGACCTCAGTACCAGTTTGAATAGGCTTCTTGAAGTTCCGGATGATTCTTTCTGGAGAACCGGATGGGTTTATGTTCGGGTTCAGCACCAAATAGCTTTTGTTTATCATGGTCAGGTTGTAGTTGACACGTCATTGCCACTTAGAAACAAGAATTACTGTAGAATCACAAGTATAAATCCGGTTGCCGTTTCTGCATCCAAGAAGGCAATATTTTCAGTTAAAGGAATAAACTTGACCCGACCTACGACAAGGTTACTCTGTGCAATTGAAGGGAAATATCTGACTCAGGAAGCTTCAGATGAGTCATCAGAAAGCGGTGATAACTTGAAGACGCAAGATGACAGCGAATGCGTTACTTTTTCATGCTCTATTCCTGATGTATATGGAAGGGGATTCATTGAGGTGGAAGATCATGGTTTTAGCAGCAGTTCCATTCCTTTCATAGTTGCAGAGGAGGATGTTTGTTCTGAGATCTGTACGCTTCAGACTGCATTAGAATTTACCGAAACGTGTTCAAATTCCGGGGAAGCCACAGAGATGGAAGGAAGGAGTAGCGCGATGGAGTTTATTCATGAAATTGGTTGGCTGTTTCATAGAAGTCAATTGAAGTCTAGATTAGGTCACTTGGATCCTAATGAAAATCTCTTTTCGCTGACACGGTTTAAGTGGCTCATGGAGTTCTCCATGGACCATGACTGGTGTGCTGTGGTTAAAAAGCTGTTAGATGTTGTTCTCGATGGGACCGTGGATGCTGGAGAGCATGCATCCTTGAATCTTGCATTGACCGAAATGAGTCTTCTTCACCGAGCAGTGAGAAAAAACAATCGGTCACTGGTGGAACTCCTTTTGAGATACCCTTCAAGAGTAAATGATGCATCGAGTTCTGAAGACAATGCATCCGTTGATGTAGGGACTGATAGCTTCCTGTTTAGACCCGACGTCATTGGCCCGGCTGGTTTGACCCCTCTTCACATTGCAGCTGGTAAAGATGATTCCGAGGATGTTCTTGATGCATTAACTAATGACCCGGGAATGGTGGGAGTTGAGGCTTGGAAGAATGCTCGAGACAGCACGGGCTCGACCCCTGAGGATTATGCCCGTTTGCGCGGCCATTACTCGTATATTCGCCTTGTCCAGAGGAAAATCAACAAGAGATCTGCAGCTGGGCATGTGGTGCTGGACATTCCTAGTACTCTCTCAGACGGTAGCTGGAATCAAAAACAGAACACTGATTTGACCTCCTCCAGGTTTGAGATTGGTAGAACAGACATGAAACCTACTCAGCTGCAGCATTGCAGGCTTTGTGTCAGGAAACCACTCGGTTGTGGAGCGTCGTCGTCTAGTGCGTCTCTGGTCTACAGGCCCGCAATGCTCTCGATGGTGGCCATTGCAGCTGTCTGTGTGTGCGTTGCGCTCCTATTCAAGAGCTCGCCCGAGGTCCTCTATGTCTTCCGCCCCTTCCGATGGGAACTATTAGATTACGGTACTAGT 3045 45.35 MEAGYEGEACQLYGVGSMDLRAAVGKRSLEWDLNDWKWDGDLFIARPLNTMESDHLSRQLFPIVSGIPLTGGSSNSSSSCSDEANMGIEKGKREVEKRRRVTVMEDENLNDEARALSLKVGGNGSQIAEREAGNWEGTSGKKTKLSGGNSNRAVCQVEDCGADLSNAKDYHRRHKVCEMHSKASRALVANVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKINPDNVVNGNSPPDEQTSSYLLITLLRILANLHSNGSNQTTDQDLLAHLIRSLACQSSEHGGKNLSGILHDPQNLLNNGALIGKSDLVSTFLSNGPQVPLRPSKQHDTVPISEKPVQAIARGGDTPAISSIKPSTSNSPPAYSEIRNSTVGQCKMMNFDLNDAYVDSDDGMEDIERPALPAHMGTSSLECPSWVQQDSHQSSPPQTSGNSDSASAQSPSSSAGDAQSRTDRIILKLFGKAPNDFPHVLRAQVLDWLSHSPTEIESYIRPGCVILTIYLRQTEAAWDDLCHDLSTSLNRLLEVPDDSFWRTGWVYVRVQHQIAFVYHGQVVVDTSLPLRNKNYCRITSINPVAVSASKKAIFSVKGINLTRPTTRLLCAIEGKYLTQEASDESSESGDNLKTQDDSECVTFSCSIPDVYGRGFIEVEDHGFSSSSIPFIVAEEDVCSEICTLQTALEFTETCSNSGEATEMEGRSSAMEFIHEIGWLFHRSQLKSRLGHLDPNENLFSLTRFKWLMEFSMDHDWCAVVKKLLDVVLDGTVDAGEHASLNLALTEMSLLHRAVRKNNRSLVELLLRYPSRVNDASSSEDNASVDVGTDSFLFRPDVIGPAGLTPLHIAAGKDDSEDVLDALTNDPGMVGVEAWKNARDSTGSTPEDYARLRGHYSYIRLVQRKINKRSAAGHVVLDIPSTLSDGSWNQKQNTDLTSSRFEIGRTDMKPTQLQHCRLCVRKPLGCGASSSSASLVYRPAMLSMVAIAAVCVCVALLFKSSPEVLYVFRPFRWELLDYGTS 1015
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 24026372 24033498 + MC08g1617 Mch8g2099 695720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g2099 1015 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 34 1013 IPR044817 GO:0003677(InterPro)
Mch8g2099 1015 MobiDBLite consensus disorder prediction 419 454 - -
Mch8g2099 1015 FunFam Squamosa promoter-binding-like protein 14 146 216 - -
Mch8g2099 1015 MobiDBLite consensus disorder prediction 349 373 - -
Mch8g2099 1015 SUPERFAMILY Ankyrin repeat 780 897 IPR036770 -
Mch8g2099 1015 ProSiteProfiles Zinc finger SBP-type profile. 152 229 IPR004333 GO:0003677(InterPro)
Mch8g2099 1015 MobiDBLite consensus disorder prediction 356 373 - -
Mch8g2099 1015 Pfam SBP domain 155 228 IPR004333 GO:0003677(InterPro)
Mch8g2099 1015 Gene3D - 146 216 IPR036893 GO:0003677(InterPro)|GO:0005634(InterPro)
Mch8g2099 1015 Gene3D - 724 902 IPR036770 -
Mch8g2099 1015 SUPERFAMILY SBT domain 153 234 IPR036893 GO:0003677(InterPro)|GO:0005634(InterPro)
Mch8g2099 1015 SMART ANK_2a 780 809 IPR002110 GO:0005515(InterPro)
Mch8g2099 1015 SMART ANK_2a 876 905 IPR002110 GO:0005515(InterPro)
Mch8g2099 1015 SMART ANK_2a 836 866 IPR002110 GO:0005515(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0015 Mch-Chr11:129531 Mch8g2099 Mch-Chr8:24026372 6.10E-121 dispersed
Mch4g0143 Mch-Chr4:960427 Mch8g2099 Mch-Chr8:24026372 2.76E-31 dispersed
Mch7g0067 Mch-Chr7:649973 Mch8g2099 Mch-Chr8:24026372 1.35E-30 dispersed
Mch8g1392 Mch-Chr8:10364197 Mch8g2099 Mch-Chr8:24026372 2.13E-29 dispersed
Mch8g2099 Mch-Chr8:24026372 Mch9g2377 Mch-Chr9:23647717 8.93E-26 dispersed
Mch8g2099 Mch-Chr8:24026372 Mch6g0308 Mch-Chr6:2036245 9.79E-30 transposed
Mch8g2099 Mch-Chr8:24026372 Mch3g1679 Mch-Chr3:18429392 1.25E-29 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
43891 PF03110 SBP 1.50E-29 No_clan Mch TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g2099 - - - 0.0