Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g2109 ATGGAGGAAACTTTTGTTCCTCTTCGTGGAATCAAGAATGACCTGAAAGGCAGATTAGTGTGCTATACACAGGACTGGACTGGTGGATTGAGAGCTGGTTATAGGATTTTGGCTCCCACCACTTACATATTTTTTGCCTCTGCCATTCCTGTCATTTCATTTGGAGAACAATTGGAGAGAAGTACTGATGGGGTGCTGACAGCAGTTCAAACCTTAGCTTCCACAGCTCTTTGTGGGATCATACACTCCATTGTTGGAGGTCAACCTTTGCTCATATTAGGAGTTGCTGAGCCTACCGTCATTATGTACACCTTCATGTTTAATTTTGCAAAGGAACGACCCGAGTTGGGACGGAATCTGTTTCTAGCATGGAGTGGATGGGTGTGTGTTTGGACTGCAGCCTTGCTGTTCTTGATGGCTATATTGGGAGCTTGCTCCATCATCAATAGGTTCACACGTCTGGCCGGTGAATTGTTTGGTTTGCTCATCGCAATGCTTTTTATGCAGCAAGCGATCAAAGGACTTGTGGATGAGTTTCGCATCCCGGAACGAGAGAATCCGAAGTTGATTGAGTTTATACCTTCTTGGAGGTTTGCCAATGGGATGTTTGCTTTGGTACTGTCATTTGGCCTTCTACTCACTGCCTTACGGAGTCGAAAAGCACGGTCATGGCGATATGGATCTGGTTGGCTCAGAAGCTTGATTGCAGACTATGGAGTCCCGCTCATGGTTCTTGTCTGGACAGGTATTTCGTATATACCTTCACAAAGTGTCCCACATGGTATCCCAAGGCGACTCTTCAGCCCGAACCCATGGTCTCCCGGTGCATACGAAAATTGGACTGTTGTTAAGGATATGCTTGATGTTCCAGTTCTTTATATCTGTGGAGCTTTCATCCCGGCCACGATGATTGCAGTGCTCTACTATTTCGACCACAGCGTTGCATCTCAACTTGCTCAGCAGAAAGAGTTCAATTTGAGGAAACCATCTTCATACCATTATGATTTACTTCTATTGGGATTCTTGACCTTATTATGTGGTCTTCTTGGAATCCCTCCATCTAATGGAGTCATCCCACAATCTCCAATGCATACAAAGAGCCTAGCAACTCTCAAGCACCAGTTGTTACGGAATAAACTTGTCGAAACGGCACGGAGTAGTATGAGAAAGAATGCTAGCTTGGGACAGTTGTATGGAAATATGCAAGAAGCTTATCAACAAATGCAGACCCCCCTTATCTACCAACAGCCCTCAGTTCGTGGACTGAATGAGCTAAAAGAAACAACCATTCAAGCAGCTTCGAGTATGGGCAGTTTCGATGCTCCAGTCGACGAGACAATATTTGACATCGAGAAGGAAATTGATGATCTCTTGCCTGTTGAGGTGAAAGAACAGCGTGTCAGTAATCTGCTTCAAGCTGCGATGGTGGGGGGATGCGTTGCAGCCATGCCGGTCCTGAAGAAGATCCCGACCTCGGTTCTGTGGGGTTACTTCGCATTCATGGCAATCGAAAGCTTGCCTGGTAACCAGTTTTGGGAAAGAATCTTGTTGCTCTTTACTGCACCCAGCAGAAGATACAAAGTTCTTGAGGATTACCACGCAACTTTCGTCGAAACCGTGCCGTTTAAGTCGATTGCACTATTTACCATTTTCCAAACTGTATACTTGTTCATATGTTTTGGACTAACATGGGTTCCGATTGCCGGGGTCATGTTTCCTCTGATGATCATGCTCCTCGTCCCAGTAAGACAGTACCTTCTTCCCAAGTTTTTCAAAGGTGCACATCTTCAAGATCTCGATGCTGCTGAGTATGAAGAAGCACCGGCTTTACCATTCAATCTCGCAATGGAAGCCGAGCTGGGTTCTGGAGCCTCTTTCGGTGGAGACGGGGAGATTTTAGATGAGGTTATCACCCGAAGCCGTGGCGAGTTTAGGCATATTAGCAGTCCTAAGATCACAAGCTCCACAGCAACCCCAACAGGTGACCGAAAGAGTTTAGACAGCCTTCGCTCTTTCAGCCCTCGGTTGAGCGAGCTAAGAGGAGAGCACAGTCCTCGAGCAGGCGGACGAGGGACACCGGGACAGAGAAGTGCAGAAGCTAAACCATCCAGTCTGGGAAAGAGCCCTCTTAATAACACAGCATCAAAGTAG 2151 46.68 MEETFVPLRGIKNDLKGRLVCYTQDWTGGLRAGYRILAPTTYIFFASAIPVISFGEQLERSTDGVLTAVQTLASTALCGIIHSIVGGQPLLILGVAEPTVIMYTFMFNFAKERPELGRNLFLAWSGWVCVWTAALLFLMAILGACSIINRFTRLAGELFGLLIAMLFMQQAIKGLVDEFRIPERENPKLIEFIPSWRFANGMFALVLSFGLLLTALRSRKARSWRYGSGWLRSLIADYGVPLMVLVWTGISYIPSQSVPHGIPRRLFSPNPWSPGAYENWTVVKDMLDVPVLYICGAFIPATMIAVLYYFDHSVASQLAQQKEFNLRKPSSYHYDLLLLGFLTLLCGLLGIPPSNGVIPQSPMHTKSLATLKHQLLRNKLVETARSSMRKNASLGQLYGNMQEAYQQMQTPLIYQQPSVRGLNELKETTIQAASSMGSFDAPVDETIFDIEKEIDDLLPVEVKEQRVSNLLQAAMVGGCVAAMPVLKKIPTSVLWGYFAFMAIESLPGNQFWERILLLFTAPSRRYKVLEDYHATFVETVPFKSIALFTIFQTVYLFICFGLTWVPIAGVMFPLMIMLLVPVRQYLLPKFFKGAHLQDLDAAEYEEAPALPFNLAMEAELGSGASFGGDGEILDEVITRSRGEFRHISSPKITSSTATPTGDRKSLDSLRSFSPRLSELRGEHSPRAGGRGTPGQRSAEAKPSSLGKSPLNNTASK 716
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 24148031 24152710 - MC08g1625 Mch8g2109 695730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g2109 716 MobiDBLite consensus disorder prediction 697 716 - -
Mch8g2109 716 MobiDBLite consensus disorder prediction 648 716 - -
Mch8g2109 716 MobiDBLite consensus disorder prediction 648 672 - -
Mch8g2109 716 Pfam HCO3- transporter integral membrane domain 8 180 IPR011531 GO:0006820(InterPro)|GO:0016020(InterPro)
Mch8g2109 716 Pfam HCO3- transporter integral membrane domain 201 373 IPR011531 GO:0006820(InterPro)|GO:0016020(InterPro)
Mch8g2109 716 Pfam HCO3- transporter integral membrane domain 460 602 IPR011531 GO:0006820(InterPro)|GO:0016020(InterPro)
Mch8g2109 716 Gene3D Helical hairpin bin 18 60 - -
Mch8g2109 716 PANTHER ANION EXCHANGE PROTEIN 5 639 IPR003020 GO:0005452(InterPro)|GO:0005886(PANTHER)|GO:0006820(InterPro)|GO:0016020(InterPro)|GO:0022857(PANTHER)|GO:0046715(PANTHER)|GO:0050801(PANTHER)|GO:0055085(PANTHER)
Mch8g2109 716 FunFam probable boron transporter 2 18 60 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch3g1443 Mch-Chr3:16766892 Mch8g2109 Mch-Chr8:24148031 0 dispersed
Mch8g0425 Mch-Chr8:3041196 Mch8g2109 Mch-Chr8:24148031 4.13E-271 dispersed
Mch8g2109 Mch-Chr8:24148031 Mch8g1149 Mch-Chr8:8182561 3.31E-276 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g2109 K24194 - csv:101205388 1367.06