Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g2180 ATGTTCCGGCGAATATTGATTCAGCGGCCCATTGATGTTCTGCAAGAAAAATCGATCCCCCTTGATTGGACTTGTGACTCAAAGTTGATTAAAATGGCATCATTAGCTAAAGAAAGTGGACAACAAATTTCTAGTAGTATTGAGATCGGCAAATGTGAGAGCTACTTAGTTTTTAGTGGCGAAACTTCCCTTGGGGAGTCATTTCGGATATTCCTATATTTTATGGGCCTTGCTTATTGTTTCATTGGATTGTCTGCTATTACTGCTCGATTTTTCCGGTCCATGGAGAATGTTGTGAAGCACTCAAGGAAGGTGGTAGAGATAGATCCATACACCAATACTGAAATTATTCGATATGAGAAGGTCTGGAATTTTACCATTGCAGATATCAGCTTACTGGCATTTGGCACTAGCTTTCCTCAAATATCATTAGCTACTATTGATGCTATTCGAAATATTGGCAACCTGTATGCTGGAGGTCTGGGACCTGGAACACTAGTTGGTTCTGCTGCTTTCGACCTTTTTCCCATTCATGCTGTTTGCGTTGTTGTGCCCAAGGCAGGAGAGTTGAAAAAGATATCTGACCTAGGAGTTTGGCTAGTTGAGCTCCTTTGGTCATTCTGGGCCTATATTTGGTTATACATTATTTTGGAGGTATGGACTCCAAATGTAATAACTCTTTGGGAAGCTTTGTTGACTGTGCTACAGTATGGATTACTGCTGACACATGCTTATGCTCAAGATAAGCGGTGGCCCTACTTGTCTCTTCCCTTTGCAAGAACTGAGAGGCCAGAGGAGTGGGTACCACCTGAGACTGCTACATGCAGACGGGAGAATATCTATGGAGAGATATTTCAAGCCCATGAGAATGAGATTATTGACATTTTCTCTGTTCATGATAAAAATGAAAGAGTTCCTGGACATGATGTTGCTGAATCCTCCTGTAGTAAATTTCCGGAGGAGACGGATGAGAATATAGACCACCCACATGTGCTTACAGTTTGGAAACAACAATTTGCGGATGCACTCTCGTTGGAAACTTTGGAATCAAGAAAGCTGAACAACATCCACTTACGACTTGCGAGAATATGCTGGCAGCTGCTTCTCGCTCCGTGGAGACTTCTGTTTGCAATTGTGCCTCCTTATCACATTGCTCATGGATGGCTTGCCTTTATTTGCTCTCTTATTTTCATCAGTGGGATAGCTTACATCGTCACTAAGCTCACAGATCTGATAAGCTGTGTCTCAGGAATAAATCCTTATGTCATAGCATTTACGGCCTTGGCAAGTGGAACTTCATGGCCAGATTTAGTGGCTAGTAAGATTGCTGCTGAGCGTCAGACAACTGCAGACTCGGCCATTGCAAACATTACATGCAGCAACTCAGTGAACATATACGTGGGAATTGGAGTTCCATGGCTGATTAGCACTGCCTACAATTTCGCAGCGTATCGAGAGCCCCTGAGGATAAAGGATGCAGCAGGCCTCAGCTTTTCTCTGCTGGTATTTTTCTCAACTTCTGTGGGTTGCATTGCTGTTCTTGTATTCAGGCGTGTGACATTAGGTGCAGAACTTGGAGGGCCAAGGCTGTGGGCTTGGGTTACGTGCATATTCTTCATGTTGCTTTGGCTTATTTTCATTGTGCTGTCTTCCCTCAAGGTTTCTCACATCATATGA 1677 43.35 MFRRILIQRPIDVLQEKSIPLDWTCDSKLIKMASLAKESGQQISSSIEIGKCESYLVFSGETSLGESFRIFLYFMGLAYCFIGLSAITARFFRSMENVVKHSRKVVEIDPYTNTEIIRYEKVWNFTIADISLLAFGTSFPQISLATIDAIRNIGNLYAGGLGPGTLVGSAAFDLFPIHAVCVVVPKAGELKKISDLGVWLVELLWSFWAYIWLYIILEVWTPNVITLWEALLTVLQYGLLLTHAYAQDKRWPYLSLPFARTERPEEWVPPETATCRRENIYGEIFQAHENEIIDIFSVHDKNERVPGHDVAESSCSKFPEETDENIDHPHVLTVWKQQFADALSLETLESRKLNNIHLRLARICWQLLLAPWRLLFAIVPPYHIAHGWLAFICSLIFISGIAYIVTKLTDLISCVSGINPYVIAFTALASGTSWPDLVASKIAAERQTTADSAIANITCSNSVNIYVGIGVPWLISTAYNFAAYREPLRIKDAAGLSFSLLVFFSTSVGCIAVLVFRRVTLGAELGGPRLWAWVTCIFFMLLWLIFIVLSSLKVSHII 558
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 24861296 24868669 - MC08g1692 Mch8g2180 695801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g2180 558 PANTHER SODIUM/CALCIUM EXCHANGER 313 558 IPR051171 GO:0015491(PANTHER)|GO:0016020(PANTHER)|GO:0030001(PANTHER)
Mch8g2180 558 Gene3D - 126 297 IPR044880 -
Mch8g2180 558 Gene3D - 348 552 IPR044880 -
Mch8g2180 558 Pfam Sodium/calcium exchanger protein 386 550 IPR004837 GO:0016020(InterPro)|GO:0055085(InterPro)
Mch8g2180 558 Pfam Sodium/calcium exchanger protein 73 244 IPR004837 GO:0016020(InterPro)|GO:0055085(InterPro)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g2180 K03452 - csv:101205540 897.501