Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch8g2271 | ATGGCGTCGAAGATCGATGGAGTCGAAGAGGATAAAATCTCACGGCTGGAAGAAGGTACGATCGCCGTCCGCGTCGCCCGTCTCTGTCCCGCATCTATCGTCGCATGCATCCAAAAGTTTATGGCGGAGGTGATCGGAACTTACTTCGTGATCTTCGCCGGATGCGGATCGGTGGCGGTGAACAAGATCTACGGAGGATCGGTGACTTTTCCGGGAATATGTGTGGTTTGGGGATTGATTGTTATGGTTATGATTTACACAGTGGGACACATCTCTGGAGCGCACTTCAACCCCTCAGTTACCATCACACTCGCCATTTTTCGTGGCTTCCCCTGGTGGCAGGTTCCAATTTACATAGTAGCTCAAGTATCAGGGTCACTTCTTGCAAGCTGCACATTGGATCTAGTGTTTGATGTGACCGTTGAAGCATTCTACGGGACTGTGCCTGCTGGATCTAATGTTCAGTCGTTTGTTCTTGAAATCATCATCACCTTCCTCTTGCTGTTTGTTGTTTTTGCCACCTCCAATAACACCGGTGTAGGAGAATTGGGTGGAGTTATTGTTGGCATGACCATTCTCTTAAACGTTTTTGTTGCCGGGCCGATTTCTGGAGCGTCAATGAATCCAGCGAGGACCCTTGGACCCGCGATAGTGAGGCATGAATTCAGAGGACTATGGGCTTACATTGCGGGGCCGTTGATCGGAGCACTCGCCGGAGGATTCGTATTTGACCTAGTGAAGCCAAGGGAGCTGACCAGAAGCAGCTCCTGCCTCACCGGCAGCCGGAAAACG | 792 | 50.88 | MASKIDGVEEDKISRLEEGTIAVRVARLCPASIVACIQKFMAEVIGTYFVIFAGCGSVAVNKIYGGSVTFPGICVVWGLIVMVMIYTVGHISGAHFNPSVTITLAIFRGFPWWQVPIYIVAQVSGSLLASCTLDLVFDVTVEAFYGTVPAGSNVQSFVLEIIITFLLLFVVFATSNNTGVGELGGVIVGMTILLNVFVAGPISGASMNPARTLGPAIVRHEFRGLWAYIAGPLIGALAGGFVFDLVKPRELTRSSSCLTGSRKT | 264 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 25844295 | 25847342 | - | MC08g1775 | Mch8g2271 | 695892 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch8g2271 | 264 | ProSitePatterns | MIP family signature. | 95 | 103 | IPR022357 | - | |
Mch8g2271 | 264 | PRINTS | Major intrinsic protein family signature | 114 | 133 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Mch8g2271 | 264 | PRINTS | Major intrinsic protein family signature | 226 | 246 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Mch8g2271 | 264 | PRINTS | Major intrinsic protein family signature | 159 | 177 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Mch8g2271 | 264 | PRINTS | Major intrinsic protein family signature | 77 | 101 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Mch8g2271 | 264 | PRINTS | Major intrinsic protein family signature | 189 | 211 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Mch8g2271 | 264 | PRINTS | Major intrinsic protein family signature | 38 | 57 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Mch8g2271 | 264 | NCBIfam | MIP family channel protein | 42 | 243 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Mch8g2271 | 264 | Gene3D | Glycerol uptake facilitator protein. | 7 | 255 | IPR023271 | - | |
Mch8g2271 | 264 | SUPERFAMILY | Aquaporin-like | 35 | 251 | IPR023271 | - | |
Mch8g2271 | 264 | Pfam | Major intrinsic protein | 34 | 243 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Mch8g2271 | 264 | PANTHER | AQUAPORIN NIP2-1 | 34 | 249 | IPR034294 | - | |
Mch8g2271 | 264 | CDD | MIP | 38 | 246 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch1g1967 | Mch-Chr1:19361161 | Mch8g2271 | Mch-Chr8:25844295 | 4.60E-89 | dispersed | |
Mch1g1968 | Mch-Chr1:19364976 | Mch8g2271 | Mch-Chr8:25844295 | 5.01E-83 | dispersed | |
Mch7g0541 | Mch-Chr7:9331309 | Mch8g2271 | Mch-Chr8:25844295 | 4.73E-07 | dispersed | |
Mch8g1676 | Mch-Chr8:14723573 | Mch8g2271 | Mch-Chr8:25844295 | 5.70E-54 | dispersed | |
Mch8g2271 | Mch-Chr8:25844295 | Mch9g1489 | Mch-Chr9:17287242 | 2.59E-16 | dispersed | |
Mch8g2271 | Mch-Chr8:25844295 | Mch5g1710 | Mch-Chr5:17824641 | 1.34E-31 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch8g2271 | K09874 | - | csv:101215315 | 384.03 |