Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g2285 ATGCTAGTCAAACTAAAAACACTATATTTTATTCTTAAAGAGAGAAAAAAAGTAAATATATTTGAAGCTATAAATAAGAGGGGAGAGGGAGCCAAAACCCCAATCAATTTCACATTGCATTGGAAAAAAGGAAATTGGGTTTCTTCTTCCTGTGGTGCATCCGAAAGAAGGAAGAAGAAGACAATCGATAGCCCCACAGAAGAAGAAGAAGTTAAAATCACAGCGCAATTGGGCCTCTTCATCTTCATTTCAGAGCTTCGGAGAAATCAATTGAGGGGTTTGAAAGAAAAAATGGAGAATCTGATGGGTCTGCTCAGAATCCACGTCTACAGAGGGGTCAATCTCGCCGTAAGAGACGTTGTTAGCAGCGATCCTTACGTTATTTTCAAGATGGGCAAACAGAAGTTGAAGACTCGAGTGGTGAAACAAAACATCAATCCGGAGTGGAACGAAGATCTAACTCTATCGATCCAAGATCCAAATCTCCCCGTCTACGTGCTGGTATACGACAAGGACTTGTTCTCGTTGGACGACAAGATGGGCGATGCAGAGTTCGACGTTCGGCCATTCATGGAAGCGGTGAAGATGAGGCTGAACAACCTCCCAAGTGGAACCATCATAAGAAAGATTCAACCAAGCAGGGAGAATTGCTTGTCTGAAGAAAGTTGCATAGTTTGGGCAAATGGACAAGTTATTCAGAAGATGTTTCTAAGGCTAAGAAATGTGGAGTCTGGTGAAATTGAACTGCAGTTGCAATGGATTGATATTCCTGGTTCCAGGGGATTGTAA 789 42.08 MLVKLKTLYFILKERKKVNIFEAINKRGEGAKTPINFTLHWKKGNWVSSSCGASERRKKKTIDSPTEEEEVKITAQLGLFIFISELRRNQLRGLKEKMENLMGLLRIHVYRGVNLAVRDVVSSDPYVIFKMGKQKLKTRVVKQNINPEWNEDLTLSIQDPNLPVYVLVYDKDLFSLDDKMGDAEFDVRPFMEAVKMRLNNLPSGTIIRKIQPSRENCLSEESCIVWANGQVIQKMFLRLRNVESGEIELQLQWIDIPGSRGL 262
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 25933817 25935535 - MC08g1787 Mch8g2285 695906
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g2285 262 Gene3D C2 domain 101 257 IPR035892 -
Mch8g2285 262 CDD C2_ArfGAP 103 245 - -
Mch8g2285 262 SMART C2_3c 104 199 IPR000008 -
Mch8g2285 262 ProSiteProfiles C2 domain profile. 86 200 IPR000008 -
Mch8g2285 262 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 99 188 IPR035892 -
Mch8g2285 262 Pfam C2 domain 103 190 IPR000008 -
Mch8g2285 262 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 98 260 IPR044562 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch4g1416 Mch-Chr4:17631385 Mch8g2285 Mch-Chr8:25933817 3.07E-70 dispersed
Mch6g0426 Mch-Chr6:2834751 Mch8g2285 Mch-Chr8:25933817 1.04E-79 dispersed
Mch8g2285 Mch-Chr8:25933817 Mch9g1288 Mch-Chr9:14944469 3.83E-58 dispersed
Mch8g2285 Mch-Chr8:25933817 Mch3g1585 Mch-Chr3:17807303 2.99E-80 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g2285 - - - 0.0