Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g2309 ATGAAGCGGGATCACAGGCATCGATCTGCAAATGCCGGCTACGGCGGGCCCGGCGAGGGGGCCGCCGCCGGTTCCAGCAAGGCCAAGATGTGGGCGGAGGAGGAGGAGGAGGAGGAAGAAGGCGGAGGAGGAGGGAAGCGGAATTCCGGCGGCGAGGACAAGCTTCTGGCGGCTTTGGGGTATAATGTCCGGTCGTCGGACATGGCGGATGTGGCTCTGAAGCTCGAGCAGCTGGAAATGGTGATGGGTTTGTCGGAGGAAGATGGGATTTCTCATCTCTCTTCCAATACTGTTCATTATAATCCCTCCGATGTCGCTGCTTGGGTTCAGAGCATGCTCGCCGAGCTCAATAGCCCCCTTCAATCCCAACAAATCGACGATCCTGTTCTCGCCATAGCCGAATCTTCAAAGCTCGATGCTCAATCCATGGTGTTCAGCGACGATTCTGAGTACGATCTGAGGGCAATTCCGGGGGTTGCAGCTTTTCCCCAAAACGATTCCGTTAACCCGCGGAAGCGGTTGAAGAAATCGATCGGATCGGATTCCGAAACCATGATTTTTTCCGCATCGTCTTCTTCCTCGTCCTCGTCGGAGCCGTCGCGGTCGGTGGTTCTCGTCGATTCGGCGGAGACCGGCGTCCGGCTGGTCCACACCCTCCTGGCCTGCGCCGATGCCGTCGAGAAGAACAATCCGAACCTCGCCAAGACTCTTCTGAAGCACATCGGAATCCTCGCGGCGGCGCAAGCCGGCGCCATGAGGAAAGTCGCCACCTACTTCGCCGAAGCCCTAGCTCGCCGGATTTACGAAATCCCGCCGCAGAAACCCTTCGATTCCTCTGCTTACACCGATCTTCTCCAGATGCATTTCTACGACTCCTGCCCTTACCTCAAATTCGCCCATTTCACTGCAAATCAAGCCATTCTCGAAGCCTTTGGAACCGCCGGGAGAGTCCACGTGATCGATTTCGGCCTCCAGCAAGGCCTCCAATGGCCGGCGCTTATGCAGGCGCTTGCCCTCCGCCCAGGCGGCCCGCCGGCGTTCCGTCTCACCGGGATCGGCCCCCCGCAGCCGGACGATTCCACCACAGACGGACTGCAGCAAGTGGGATGGAAATTAGCTCAATTAGCCGACAAAATCGGCGTCACGTTCGAATTCCGCGGCTTCTTCTGCAACAGCCTCGCCGATCTCGAGCCGGCGATGCTCGATTTACGTCCCCCGGAGGTGGAAACCGTCGCCGTGAACTCCATTTTCGAGCTCCACCGGCTTCTCTCCCGGCCAGGCGCGATCGAAAAGGTCCTCTCCTCGATCAAAGAACTAAACCCTAAAATCATGACCGTCGTGGAGCAGGTCGCCGATCACAACGGGCCGTCGTTTCTCGACCGGTTCACGGAGGCTCTGCATTACTACTCGAGCCTGTTTGATTCGTTAGAAGGTTCGCCGGCGGGGGAGGATCTGGAGATGTCGGAGCTGTACTTGGGGAAGCAAATCTGCAACGTGGTGGCGTACGAGGGAGCCGACCGAGTGGAGCGGCACGAGACGGTGACTCAGTGGCGGAATCGGATGGAATCGGTCGGGTTCGAACTGGTTCACCTCGGATCGAACGCGTTCAAGCAGGCGAGTACGCTGCTGGCGCTGTACGCCGGCGGGAACGGCTACAGAGTCGACGAGAGCAACGGAAGTTTGATGCTCGGATGGCATACGCGGCCGCTGATCGCCACGACGGCGTGGGCGGTGGCCGCCGGCGGGTCGGGATGA 1755 59.43 MKRDHRHRSANAGYGGPGEGAAAGSSKAKMWAEEEEEEEEGGGGGKRNSGGEDKLLAALGYNVRSSDMADVALKLEQLEMVMGLSEEDGISHLSSNTVHYNPSDVAAWVQSMLAELNSPLQSQQIDDPVLAIAESSKLDAQSMVFSDDSEYDLRAIPGVAAFPQNDSVNPRKRLKKSIGSDSETMIFSASSSSSSSSEPSRSVVLVDSAETGVRLVHTLLACADAVEKNNPNLAKTLLKHIGILAAAQAGAMRKVATYFAEALARRIYEIPPQKPFDSSAYTDLLQMHFYDSCPYLKFAHFTANQAILEAFGTAGRVHVIDFGLQQGLQWPALMQALALRPGGPPAFRLTGIGPPQPDDSTTDGLQQVGWKLAQLADKIGVTFEFRGFFCNSLADLEPAMLDLRPPEVETVAVNSIFELHRLLSRPGAIEKVLSSIKELNPKIMTVVEQVADHNGPSFLDRFTEALHYYSSLFDSLEGSPAGEDLEMSELYLGKQICNVVAYEGADRVERHETVTQWRNRMESVGFELVHLGSNAFKQASTLLALYAGGNGYRVDESNGSLMLGWHTRPLIATTAWAVAAGGSG 584
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 26277069 26279173 + MC08g1809 Mch8g2309 695930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g2309 584 ProSiteProfiles GRAS family profile. 206 577 IPR005202 -
Mch8g2309 584 FunFam DELLA protein GAI 51 116 - -
Mch8g2309 584 Pfam GRAS domain family 215 576 IPR005202 -
Mch8g2309 584 Pfam Transcriptional regulator DELLA protein N terminal 53 119 IPR021914 -
Mch8g2309 584 SMART DELLA_2 53 126 - -
Mch8g2309 584 Gene3D - 51 116 IPR038088 -
Mch8g2309 584 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 193 576 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0009723(PANTHER)|GO:0009737(PANTHER)|GO:0009863(PANTHER)|GO:0009867(PANTHER)|GO:0009938(PANTHER)|GO:0010187(PANTHER)|GO:0042538(PANTHER)|GO:0043565(PANTHER)|GO:2000033(PANTHER)|GO:2000377(PANTHER)
Mch8g2309 584 MobiDBLite consensus disorder prediction 1 51 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch4g1687 Mch-Chr4:20041674 Mch8g2309 Mch-Chr8:26277069 3.52E-244 dispersed
Mch5g1847 Mch-Chr5:18703155 Mch8g2309 Mch-Chr8:26277069 4.04E-49 dispersed
Mch6g0092 Mch-Chr6:575413 Mch8g2309 Mch-Chr8:26277069 2.33E-57 dispersed
Mch6g0766 Mch-Chr6:5285835 Mch8g2309 Mch-Chr8:26277069 5.65E-134 dispersed
Mch6g2436 Mch-Chr6:26265841 Mch8g2309 Mch-Chr8:26277069 1.12E-44 dispersed
Mch8g2309 Mch-Chr8:26277069 Mch9g1016 Mch-Chr9:8838642 5.23E-39 dispersed
Mch8g2309 Mch-Chr8:26277069 Mch1g1496 Mch-Chr1:16458092 7.20E-56 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
43908 PF03514 GRAS 2.70E-129 CL0063 Mch TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g2309 K14494 - csv:101203095 771.155