Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g2335 AAAATTCTAGTAAATTGTAACTCCGCTGTCATTTTCTCACTCTCCTTCTTCCCCATCGAAACCCTAGTCCCCAAAACTCCGTCACTTACGTCGCAAGCCCTAGCCTCCGGATTCTCCATTTTCTGCGCAATGGTTCAGCCAACAAATCCTTCCAAATTGCGATGGGGGGAGCTAGATGACGACGATAGTGATCTTGATTTTCTCCTTCCACCGAAGAAAGTTATTGGGCCAGACGAAAACGGGTTGAAGAAAACTGTTGAGTATCAGTTTAACGAAGATGGTAATAAGGTCAAGATCACAACGACCTCTCGGACTCGCAAGCTTGCGCATGCTCGCCTGAGCAAACATGCCGTGGAGCGCCGATCTTGGGCCAAGTTCGGCGATGCTGTGCATGAAGATGTCGGCAGTAGGCTCACTATGGTCTCCACTGAGGAGATTCTTCTGGAGCGCCCTCGTGCTCCTGGTAGCAAACCAGAGGAGCCAAAGGTTGCAGGAGACCCTTTAGCTCAATTGGGAAAGGGTGGTGCTGTTCTTATGGTCTGTCGTACTTGTGGTAAAAAGGGTGACCATTGGACCTCAAGGTGCCCTTACAAGGACCTGGCACCACAAGCTGATGGATTGGATAAGGCTGTTGCACCAGAGGCTACCACCGCTGCTCCTGGTGCAACAAAGGGAACGTATGTTCCTCCTGGTTTGAGACCCGGGGCAGAGAGGACTGGAACTGACATGAGACGTAGGAATGATGAAAACTCTGTTCGTGTGACCAACCTTTCAGAGGACACTAGAGAGCCTGACTTGCTTGAGCTTTTCCGACCTTTCGGTGCTGTTAGCCGAGTTTATGTTGCTGTTGATCAAAAGACTAGCATGAGTAGAGGATTTGGTTTTGTGAACTTTGTGAACCGTGAGGATGCCCAAAGATCAATTAACAAACTCAATGGATATGGTTATGATAATCTCATCCTTCGAGTTGAGTGGGCCACTCCAAGGGCGACTTAA 996 49.1 KILVNCNSAVIFSLSFFPIETLVPKTPSLTSQALASGFSIFCAMVQPTNPSKLRWGELDDDDSDLDFLLPPKKVIGPDENGLKKTVEYQFNEDGNKVKITTTSRTRKLAHARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKVAGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAPQADGLDKAVAPEATTAAPGATKGTYVPPGLRPGAERTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTSMSRGFGFVNFVNREDAQRSINKLNGYGYDNLILRVEWATPRAT 331
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 26486463 26488992 - MC08g1832 Mch8g2335 695956
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g2335 331 Pfam Eukaryotic translation initiation factor 3 subunit G 73 200 IPR024675 -
Mch8g2335 331 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G 85 326 - -
Mch8g2335 331 CDD RRM_eIF3G_like 251 326 IPR034240 -
Mch8g2335 331 MobiDBLite consensus disorder prediction 219 249 - -
Mch8g2335 331 CDD eIF3G 80 199 IPR024675 -
Mch8g2335 331 Pfam RNA recognition motif 252 318 IPR000504 GO:0003723(InterPro)
Mch8g2335 331 PIRSF Transl_init_eIF-3_RNA-bind 44 331 IPR017334 GO:0003743(InterPro)|GO:0005737(InterPro)|GO:0005852(InterPro)
Mch8g2335 331 FunFam Eukaryotic translation initiation factor 3 subunit G 215 331 - -
Mch8g2335 331 SMART rrm1_1 251 324 IPR000504 GO:0003723(InterPro)
Mch8g2335 331 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 250 328 IPR000504 GO:0003723(InterPro)
Mch8g2335 331 Gene3D - 221 331 IPR012677 -
Mch8g2335 331 SUPERFAMILY RNA-binding domain, RBD 248 329 IPR035979 GO:0003676(InterPro)
Mch8g2335 331 Hamap Eukaryotic translation initiation factor 3 subunit G [EIF3G]. 52 330 IPR017334 GO:0003743(InterPro)|GO:0005737(InterPro)|GO:0005852(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch3g1780 Mch-Chr3:19029440 Mch8g2335 Mch-Chr8:26486463 3.25E-198 dispersed
Mch8g2335 Mch-Chr8:26486463 Mch8g0145 Mch-Chr8:901121 8.40E-10 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g2335 K03248 - csv:101207022 540.806