Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch8g2335 | AAAATTCTAGTAAATTGTAACTCCGCTGTCATTTTCTCACTCTCCTTCTTCCCCATCGAAACCCTAGTCCCCAAAACTCCGTCACTTACGTCGCAAGCCCTAGCCTCCGGATTCTCCATTTTCTGCGCAATGGTTCAGCCAACAAATCCTTCCAAATTGCGATGGGGGGAGCTAGATGACGACGATAGTGATCTTGATTTTCTCCTTCCACCGAAGAAAGTTATTGGGCCAGACGAAAACGGGTTGAAGAAAACTGTTGAGTATCAGTTTAACGAAGATGGTAATAAGGTCAAGATCACAACGACCTCTCGGACTCGCAAGCTTGCGCATGCTCGCCTGAGCAAACATGCCGTGGAGCGCCGATCTTGGGCCAAGTTCGGCGATGCTGTGCATGAAGATGTCGGCAGTAGGCTCACTATGGTCTCCACTGAGGAGATTCTTCTGGAGCGCCCTCGTGCTCCTGGTAGCAAACCAGAGGAGCCAAAGGTTGCAGGAGACCCTTTAGCTCAATTGGGAAAGGGTGGTGCTGTTCTTATGGTCTGTCGTACTTGTGGTAAAAAGGGTGACCATTGGACCTCAAGGTGCCCTTACAAGGACCTGGCACCACAAGCTGATGGATTGGATAAGGCTGTTGCACCAGAGGCTACCACCGCTGCTCCTGGTGCAACAAAGGGAACGTATGTTCCTCCTGGTTTGAGACCCGGGGCAGAGAGGACTGGAACTGACATGAGACGTAGGAATGATGAAAACTCTGTTCGTGTGACCAACCTTTCAGAGGACACTAGAGAGCCTGACTTGCTTGAGCTTTTCCGACCTTTCGGTGCTGTTAGCCGAGTTTATGTTGCTGTTGATCAAAAGACTAGCATGAGTAGAGGATTTGGTTTTGTGAACTTTGTGAACCGTGAGGATGCCCAAAGATCAATTAACAAACTCAATGGATATGGTTATGATAATCTCATCCTTCGAGTTGAGTGGGCCACTCCAAGGGCGACTTAA | 996 | 49.1 | KILVNCNSAVIFSLSFFPIETLVPKTPSLTSQALASGFSIFCAMVQPTNPSKLRWGELDDDDSDLDFLLPPKKVIGPDENGLKKTVEYQFNEDGNKVKITTTSRTRKLAHARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKVAGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAPQADGLDKAVAPEATTAAPGATKGTYVPPGLRPGAERTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTSMSRGFGFVNFVNREDAQRSINKLNGYGYDNLILRVEWATPRAT | 331 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 26486463 | 26488992 | - | MC08g1832 | Mch8g2335 | 695956 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch8g2335 | 331 | Pfam | Eukaryotic translation initiation factor 3 subunit G | 73 | 200 | IPR024675 | - | |
Mch8g2335 | 331 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G | 85 | 326 | - | - | |
Mch8g2335 | 331 | CDD | RRM_eIF3G_like | 251 | 326 | IPR034240 | - | |
Mch8g2335 | 331 | MobiDBLite | consensus disorder prediction | 219 | 249 | - | - | |
Mch8g2335 | 331 | CDD | eIF3G | 80 | 199 | IPR024675 | - | |
Mch8g2335 | 331 | Pfam | RNA recognition motif | 252 | 318 | IPR000504 | GO:0003723(InterPro) | |
Mch8g2335 | 331 | PIRSF | Transl_init_eIF-3_RNA-bind | 44 | 331 | IPR017334 | GO:0003743(InterPro)|GO:0005737(InterPro)|GO:0005852(InterPro) | |
Mch8g2335 | 331 | FunFam | Eukaryotic translation initiation factor 3 subunit G | 215 | 331 | - | - | |
Mch8g2335 | 331 | SMART | rrm1_1 | 251 | 324 | IPR000504 | GO:0003723(InterPro) | |
Mch8g2335 | 331 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 250 | 328 | IPR000504 | GO:0003723(InterPro) | |
Mch8g2335 | 331 | Gene3D | - | 221 | 331 | IPR012677 | - | |
Mch8g2335 | 331 | SUPERFAMILY | RNA-binding domain, RBD | 248 | 329 | IPR035979 | GO:0003676(InterPro) | |
Mch8g2335 | 331 | Hamap | Eukaryotic translation initiation factor 3 subunit G [EIF3G]. | 52 | 330 | IPR017334 | GO:0003743(InterPro)|GO:0005737(InterPro)|GO:0005852(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch3g1780 | Mch-Chr3:19029440 | Mch8g2335 | Mch-Chr8:26486463 | 3.25E-198 | dispersed | |
Mch8g2335 | Mch-Chr8:26486463 | Mch8g0145 | Mch-Chr8:901121 | 8.40E-10 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch8g2335 | K03248 | - | csv:101207022 | 540.806 |