Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g2356 TTTTCATTGGCTGAGATTAGAGCCGCCACCAAAGATTTCGACGATATTTTCATCATCGGCATCGGCGGATTTGGCAACGTGTACAAAGGCAACATTGACGACGGAGCAACCCAAGTGGCAATCAAACGGTTGAAACCAGGCTCCAAACAGGGAGCGCACGAGTTCAAAACAGAGATCGAGATGCTCTCACAACTTCGCCATCTCCATCTCGTCTCGCTGATCGGGTACTGCAACGACGGCAACGAAATGATTCTAGTCTACGATTACATGTCTCATGGGACCCTTCGGAGCCACCTGTACGGCAGCGACGACGAACAACCCCTGACGTGGCAGCAGCGCCTCCAGATCTGCATCGGAGCTGCAAGAGGGCTACACTACCTCCACACCGGAGCCAAACACACCATCATCCACCGCGACGTCAAAACGACTAACATTTTACTCGACGACAAATGGGTCGCGAAGGTCTCTGATTTCGGATTGTCGAAAGTGGGGCCGACGAGCATGTCCAAAGCCCACGTCAGCACGGTGGTCAAAGGTAGCTTCGGATATCTAGATCCAGAGTACTACCGACGGCAGCAGTTGACAGAAAAATCCGACGTGTACTCATTCGGAGTGGTCCTCTGCGAAGTACTCTGCGGTCGTCCAGCATTGATGCGCACCGCCGACAAGAAGCAAGCGTACCTCGCCGATTGGGCGCGGCGATGCCACCGCGACAACACGGTGGCTCAGATCATCGACCCGAAAATCAAGGACGAGATCTCGCCGGAGTGTTTGAGAAAATTCATGGAGATGGCGGTGAGTTGCATCCAAGATGATGGAATCAAGCGGCCGGCGATGAACGATGTG 846 53.78 FSLAEIRAATKDFDDIFIIGIGGFGNVYKGNIDDGATQVAIKRLKPGSKQGAHEFKTEIEMLSQLRHLHLVSLIGYCNDGNEMILVYDYMSHGTLRSHLYGSDDEQPLTWQQRLQICIGAARGLHYLHTGAKHTIIHRDVKTTNILLDDKWVAKVSDFGLSKVGPTSMSKAHVSTVVKGSFGYLDPEYYRRQQLTEKSDVYSFGVVLCEVLCGRPALMRTADKKQAYLADWARRCHRDNTVAQIIDPKIKDEISPECLRKFMEMAVSCIQDDGIKRPAMNDV 282
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 26719999 26720844 - MC08g1845 Mch8g2356 695977
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g2356 282 ProSitePatterns Protein kinases ATP-binding region signature. 19 42 IPR017441 GO:0005524(InterPro)
Mch8g2356 282 PIRSF ILK 4 282 - -
Mch8g2356 282 ProSitePatterns Serine/Threonine protein kinases active-site signature. 135 147 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch8g2356 282 FunFam receptor-like protein kinase FERONIA 1 89 - -
Mch8g2356 282 FunFam Receptor-like protein kinase FERONIA 90 282 - -
Mch8g2356 282 ProSiteProfiles Protein kinase domain profile. 13 282 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g2356 282 Gene3D Transferase(Phosphotransferase) domain 1 90 282 - -
Mch8g2356 282 Gene3D Phosphorylase Kinase; domain 1 1 89 - -
Mch8g2356 282 CDD STKc_IRAK 26 282 - -
Mch8g2356 282 SMART serkin_6 13 262 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g2356 282 PANTHER OS07G0166700 PROTEIN 2 282 IPR045272 GO:0004672(PANTHER)|GO:0004714(InterPro)|GO:0005886(PANTHER)|GO:0006468(InterPro)|GO:0009506(PANTHER)|GO:0046777(PANTHER)
Mch8g2356 282 Pfam Protein tyrosine and serine/threonine kinase 19 281 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch8g2356 282 SUPERFAMILY Protein kinase-like (PK-like) 2 282 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch8g2356 Mch-Chr8:26719999 Mch8g2359 Mch-Chr8:26737529 1.82E-153 dispersed
Mch8g2356 Mch-Chr8:26719999 Mch8g2358 Mch-Chr8:26729968 5.46E-195 proximal
Mch4g2375 Mch-Chr4:24914349 Mch8g2356 Mch-Chr8:26719999 1.97E-106 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77625 PF07714 PK_Tyr_Ser-Thr 3.10E-49 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g2356 - - - 0.0