Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g2362 TTCGAGTTTCAGGGGCTCATTTCTCTCGTTTTCTTTGATTTTTTGATCGTATTGGGTCTTTTTCTGGGGCGTGGACTGCAGTTTGGTTCTTCTTTCTTGAACTTTCAAATGGGTGTGGCATATGATCCACTTGATCCAAATGGAAACATTACTGTCAAATGGGATGTTATTAGCTGGACTGCTGATGGCTATATTGCTGTCGTTACGTTGTATAATTTCCAACAGTATCGGCATATTCAAGCACCGGGGTGGTCTCTGCAATGGAAATGGGCAAAGAAAGAGGTAATATGGAGCGCAATGGGAGGCCAAGCAACAGAGCAAGGTGATTGCTCCAGATATAAAGGGAACATTCCCCATTGCTGCAAGAGGGATCCAACCATTGTCGATCTATTGCCTGGAACTCCTTATAACCAGCAGATTGCGAATTGCTGCAAAGGTGGAGTTCTCAACTCCTGGGTGCAAGATCCAGCCTCTGCAGTGAGCTCATTTCAGCTCAGTGTTGGTGCAGCTGGAACCTCGAATAAAACTGTCCGACTACCTAAGAACTTCACCTTAAAAGCACCCGGGCCTGGTTATACTTGTGGGCCTGCAAAAATTGTTAAACCTACCAAATTCATTTCCCCCGACAAACGGAGAGTTACGCAGGCCTTGATGACATGGAATGTTACGTGCACATATTCACAATTTCTGGCCCAAAAAACTCCCTCTTGCTGTATCTCGCTCTCGTCGTTCTACAACGACACCATTGTTTCTTGTCCAAAATGTTCCTGTGGCTGCCGAAGCAACATGTCCGAATCTGGAAGTTGTGTCGAGGCAAATTTTCCACATTTAGCCTCTGTTGTTACTGGTTCTAGTTCTAGTAAGAACAATTTGGCACCTCTGGTTCAGTGTACTGCCCATATGTGCCCAATTCGAGTTCACTGGCATGTGAAGCTTAACTATAAGGAGTACTGGCGCGTGAAGATCACAATTACAAACTTCAACTACAGGATGAACTATACAAATTGGAACTTAGTTGTCCAACATCCCAACTTCCATAATCTAACGCAGATTTTCAGCTTCAACTACCAGTCAATCAACCCCTACGGAAAAATAAATGACACTGCAATCCTGTGGGGAGTCAAGTTCTACAATGATCTCCTGATGCAAGCAGGCCCTCTAGGGAATGTGCAGACTGAGCTACTTTTCCGAAAGGATCAATCGATTTTCACGTTTGATAAAGGCTGGGCTTTCCCTCGAAGGATCTACTTCAACGGCGATAACTGTGTCATGCCGCCTCCAGATGCCTATCCCTGGTTACCAAATGCAGGTTCTAAGCGAGGTGTCTCGTTGTTCACTAACCTATTGTTGATGTCCTTGACTCTCCTGTCCTTTCACTATTCATTTGCATAA 1392 44.83 FEFQGLISLVFFDFLIVLGLFLGRGLQFGSSFLNFQMGVAYDPLDPNGNITVKWDVISWTADGYIAVVTLYNFQQYRHIQAPGWSLQWKWAKKEVIWSAMGGQATEQGDCSRYKGNIPHCCKRDPTIVDLLPGTPYNQQIANCCKGGVLNSWVQDPASAVSSFQLSVGAAGTSNKTVRLPKNFTLKAPGPGYTCGPAKIVKPTKFISPDKRRVTQALMTWNVTCTYSQFLAQKTPSCCISLSSFYNDTIVSCPKCSCGCRSNMSESGSCVEANFPHLASVVTGSSSSKNNLAPLVQCTAHMCPIRVHWHVKLNYKEYWRVKITITNFNYRMNYTNWNLVVQHPNFHNLTQIFSFNYQSINPYGKINDTAILWGVKFYNDLLMQAGPLGNVQTELLFRKDQSIFTFDKGWAFPRRIYFNGDNCVMPPPDAYPWLPNAGSKRGVSLFTNLLLMSLTLLSFHYSFA 463
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 26761020 26764701 + MC08g1848 Mch8g2362 695983
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g2362 463 PIRSF COBRA 15 462 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)
Mch8g2362 463 PANTHER PROTEIN COBRA 34 451 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)|GO:0046658(PANTHER)|GO:0052324(PANTHER)
Mch8g2362 463 Pfam COBRA-like protein 64 227 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g0559 Mch-Chr10:3682068 Mch8g2362 Mch-Chr8:26761020 3.14E-171 dispersed
Mch4g0514 Mch-Chr4:3304482 Mch8g2362 Mch-Chr8:26761020 2.79E-144 dispersed
Mch8g2362 Mch-Chr8:26761020 Mch8g2363 Mch-Chr8:26762816 1.05E-230 tandem
Mch3g1681 Mch-Chr3:18443883 Mch8g2362 Mch-Chr8:26761020 8.62E-110 wgd
Mch4g2378 Mch-Chr4:24926046 Mch8g2362 Mch-Chr8:26761020 8.70E-161 wgd
Mch6g0305 Mch-Chr6:2022687 Mch8g2362 Mch-Chr8:26761020 1.75E-267 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g2362 - - - 0.0