Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g2363 ATGTTAACTTCTCACTCTTCGGATCTCCCGCCATTTCTCTCACCTAGCCCTTGCTTCACGTTATGGGAACTAAACAGAACAACAACAAAAAATGAAAAAGAAAAATCCATAATCTTATATAAAGCTTTCAACAACACCCTTTTGGTATCCTCCTCCTCCTTCATTTTCTTCCTCCACTGCCCGGGAGAACTCGTTGGCTCGACTTGTCGGCCGACATTGGCTCCAATTGAACTGACCATGAGGACGTTGTTCGTTTTGGCTGTCATCTTTTTCGTCATCTTTTCTCTTGGAGATGCATACGATCCGTTGGATCCGAATGGGAACATTACTGTCAAATGGGATGTCATGTCATGGACGCCCGACGGCTATGTGGCCGTCGTGACATTAAACAACTTCCAAACGTACCGGCACATAATGAGCCCCGGGTGGACAATGGGGTGGACATGGGCGAAGAAGGAAGTGATATGGTCGATGGTCGGGGCGCAGGCGACGGAGCAAGGCGACTGCTCTAAGTTCAAGGGAAACATTCCTCATTGTTGTAAGAAAAACCCAACTGTGGTGGATTTGATGCCTGGAGTTCCTTACAACCAACAGTTTACAAACTGCTGCAAAGGTGGGGTTGTGGCTGCTTGGGGACAAGACCCTCAGGCTGCTGTTTCAGCCTTTCAGCTCAGTGTTGGCCAAGCAGGTGCTTCAAACAAGACTGTCAAACTCCCCAAGAACTTCACTCTGCTCGGTCCCGGGCCCGGATACACTTGTGGCCCTGCAAAGGTTGTGCCTTCCACTACCTTCCTCACGCCCGACCGCCGCCGCAAAACTCAGGCTCTGATGACTTGGAATGTGACCTGCACTTACTCTCAGTTTCTGGCTAGAAAGAACCCAAGTTGCTGTGTTTCTTTCTCGTCTTTCTATAACGACACGATCACGTCTTGTCCTTCTTGCGCCTGTGGTTGCCAGAACAAGAACAGCTGCGTCAAGGGTGATTCTAAGATTCTTAAGCTGGCTGGAGTCAATACACCAAGGAAAGATAACACCCCGTTGCTGCAATGCACACATCATATGTGCCCAGTTCGAGTTCACTGGCATGTGAAGCTCAATTACAAGGACTACTGGCGAGTGAAGATCGCCATCACGAACTTCAACTACAGGATGAACTACTCACTTTGGTCCCTCGTTGTCCAGCATCCGAATCTGAATAATGTTACCCAAGTTTTCAGCTTCGATTACAAACCTCTTGTTCCCTATGAATCAATCAATGACACGGGAATGTTTTACGGGATGAAGTTTTACAACGACCTTCTGATGGAAGCGGGGCCATTCGGGAATGTACAGTCGGAGGTGTTGCTTCGCAAGGACCAGAACACCTTTACCTTCAAGCAGGGATGGGCATTTCCTCGGAAAGTTTACTTCAATGGCGACGAGTGCATGCTTCCGCCACCCGATGCATACCCATTCCTGCCCAACACCGCCCGCCAAAAGCTCGTTGCACTCTCAACTTCAATCACTTTGCTGCTGCTCCTCCTACTGCAAACTATTTGCTGA 1542 48.96 MLTSHSSDLPPFLSPSPCFTLWELNRTTTKNEKEKSIILYKAFNNTLLVSSSSFIFFLHCPGELVGSTCRPTLAPIELTMRTLFVLAVIFFVIFSLGDAYDPLDPNGNITVKWDVMSWTPDGYVAVVTLNNFQTYRHIMSPGWTMGWTWAKKEVIWSMVGAQATEQGDCSKFKGNIPHCCKKNPTVVDLMPGVPYNQQFTNCCKGGVVAAWGQDPQAAVSAFQLSVGQAGASNKTVKLPKNFTLLGPGPGYTCGPAKVVPSTTFLTPDRRRKTQALMTWNVTCTYSQFLARKNPSCCVSFSSFYNDTITSCPSCACGCQNKNSCVKGDSKILKLAGVNTPRKDNTPLLQCTHHMCPVRVHWHVKLNYKDYWRVKIAITNFNYRMNYSLWSLVVQHPNLNNVTQVFSFDYKPLVPYESINDTGMFYGMKFYNDLLMEAGPFGNVQSEVLLRKDQNTFTFKQGWAFPRKVYFNGDECMLPPPDAYPFLPNTARQKLVALSTSITLLLLLLLQTIC 513
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 26762816 26766123 - MC08g1849 Mch8g2363 695984
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g2363 513 PIRSF COBRA 73 513 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)
Mch8g2363 513 PANTHER PROTEIN COBRA 84 506 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)|GO:0046658(PANTHER)|GO:0052324(PANTHER)
Mch8g2363 513 Pfam COBRA-like protein 123 286 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch3g1681 Mch-Chr3:18443883 Mch8g2363 Mch-Chr8:26762816 3.29E-118 dispersed
Mch5g0748 Mch-Chr5:5038385 Mch8g2363 Mch-Chr8:26762816 1.27E-41 dispersed
Mch6g0305 Mch-Chr6:2022687 Mch8g2363 Mch-Chr8:26762816 1.19E-235 dispersed
Mch6g0306 Mch-Chr6:2022991 Mch8g2363 Mch-Chr8:26762816 4.82E-279 dispersed
Mch8g2362 Mch-Chr8:26761020 Mch8g2363 Mch-Chr8:26762816 1.05E-230 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g2363 - - - 0.0